EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000011784 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 71829 bases
Position: chrGeneScaffold_468:7645-79473
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000010749	R3H	PF01424.22	9.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000011832	R3HDM1-201	2889	-	ENSMEUP00000010749	963 (aa)	-	UPI0001B2216F

Gene Model

Click here to download ENSMEUG00000011784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000011784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000011784	R3HDM1	74	49.296	ENSMEUG00000008588	R3HDM2	77	45.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000011784	R3HDM1	100	73.014	ENSG00000048991	R3HDM1	88	75.439	Homo_sapiens
ENSMEUG00000011784	R3HDM1	93	42.480	ENSAPOG00000020850	r3hdm1	91	41.457	Acanthochromis_polyacanthus
ENSMEUG00000011784	R3HDM1	100	73.652	ENSAMEG00000014886	R3HDM1	89	73.754	Ailuropoda_melanoleuca
ENSMEUG00000011784	R3HDM1	93	41.230	ENSAOCG00000005192	r3hdm1	94	40.765	Amphiprion_ocellaris
ENSMEUG00000011784	R3HDM1	93	40.552	ENSAPEG00000016108	r3hdm1	94	40.195	Amphiprion_percula
ENSMEUG00000011784	R3HDM1	93	40.559	ENSATEG00000000232	r3hdm1	94	41.036	Anabas_testudineus
ENSMEUG00000011784	R3HDM1	99	71.150	ENSAPLG00000015231	R3HDM1	89	70.945	Anas_platyrhynchos
ENSMEUG00000011784	R3HDM1	99	67.720	ENSACAG00000001676	R3HDM1	89	67.917	Anolis_carolinensis
ENSMEUG00000011784	R3HDM1	100	72.967	ENSANAG00000035334	R3HDM1	89	72.866	Aotus_nancymaae
ENSMEUG00000011784	R3HDM1	82	45.098	ENSACLG00000027282	r3hdm1	88	44.444	Astatotilapia_calliptera
ENSMEUG00000011784	R3HDM1	93	62.055	ENSAMXG00000012861	R3HDM1	89	56.115	Astyanax_mexicanus
ENSMEUG00000011784	R3HDM1	90	58.447	ENSAMXG00000003536	r3hdm1	90	47.255	Astyanax_mexicanus
ENSMEUG00000011784	R3HDM1	54	35.231	ENSAMXG00000020587	arpp21	66	34.674	Astyanax_mexicanus
ENSMEUG00000011784	R3HDM1	100	69.960	ENSBTAG00000013302	R3HDM1	89	70.257	Bos_taurus
ENSMEUG00000011784	R3HDM1	100	72.912	ENSCJAG00000011718	R3HDM1	89	72.811	Callithrix_jacchus
ENSMEUG00000011784	R3HDM1	100	73.957	ENSCAFG00000005075	R3HDM1	89	74.059	Canis_familiaris
ENSMEUG00000011784	R3HDM1	100	74.033	ENSCAFG00020016119	R3HDM1	99	74.217	Canis_lupus_dingo
ENSMEUG00000011784	R3HDM1	100	72.746	ENSCHIG00000020851	R3HDM1	89	72.848	Capra_hircus
ENSMEUG00000011784	R3HDM1	100	68.473	ENSCPOG00000012784	R3HDM1	93	73.288	Cavia_porcellus
ENSMEUG00000011784	R3HDM1	100	72.505	ENSCCAG00000027199	R3HDM1	89	72.403	Cebus_capucinus
ENSMEUG00000011784	R3HDM1	100	72.635	ENSCATG00000023642	R3HDM1	89	72.431	Cercocebus_atys
ENSMEUG00000011784	R3HDM1	100	68.732	ENSCLAG00000007962	R3HDM1	91	74.830	Chinchilla_lanigera
ENSMEUG00000011784	R3HDM1	100	69.148	ENSCSAG00000016356	R3HDM1	90	70.206	Chlorocebus_sabaeus
ENSMEUG00000011784	R3HDM1	75	78.896	ENSCHOG00000013638	R3HDM1	70	78.247	Choloepus_hoffmanni
ENSMEUG00000011784	R3HDM1	91	69.399	ENSCPBG00000009645	R3HDM1	84	73.449	Chrysemys_picta_bellii
ENSMEUG00000011784	R3HDM1	100	72.561	ENSCANG00000034748	R3HDM1	89	72.358	Colobus_angolensis_palliatus
ENSMEUG00000011784	R3HDM1	100	68.830	ENSCGRG00001012357	R3hdm1	87	68.830	Cricetulus_griseus_chok1gshd
ENSMEUG00000011784	R3HDM1	100	71.312	ENSCGRG00000012080	R3hdm1	85	73.253	Cricetulus_griseus_crigri
ENSMEUG00000011784	R3HDM1	90	39.641	ENSCSEG00000008944	r3hdm1	95	38.710	Cynoglossus_semilaevis
ENSMEUG00000011784	R3HDM1	90	44.058	ENSCVAG00000007582	r3hdm1	94	43.096	Cyprinodon_variegatus
ENSMEUG00000011784	R3HDM1	56	31.369	ENSDARG00000061081	arpp21	59	32.323	Danio_rerio
ENSMEUG00000011784	R3HDM1	100	69.207	ENSDNOG00000000771	R3HDM1	89	69.309	Dasypus_novemcinctus
ENSMEUG00000011784	R3HDM1	90	72.874	ENSETEG00000013606	R3HDM1	81	74.494	Echinops_telfairi
ENSMEUG00000011784	R3HDM1	57	38.276	ENSEBUG00000014746	arpp21	85	37.954	Eptatretus_burgeri
ENSMEUG00000011784	R3HDM1	100	74.438	ENSEASG00005007392	R3HDM1	89	74.438	Equus_asinus_asinus
ENSMEUG00000011784	R3HDM1	100	74.388	ENSECAG00000019114	R3HDM1	89	74.388	Equus_caballus
ENSMEUG00000011784	R3HDM1	85	83.708	ENSEEUG00000012589	R3HDM1	72	83.708	Erinaceus_europaeus
ENSMEUG00000011784	R3HDM1	92	59.922	ENSELUG00000004909	R3HDM1	92	49.300	Esox_lucius
ENSMEUG00000011784	R3HDM1	76	52.996	ENSELUG00000014413	r3hdm1	80	48.741	Esox_lucius
ENSMEUG00000011784	R3HDM1	99	73.722	ENSFCAG00000027113	R3HDM1	89	73.824	Felis_catus
ENSMEUG00000011784	R3HDM1	99	73.510	ENSFALG00000013731	R3HDM1	90	59.082	Ficedula_albicollis
ENSMEUG00000011784	R3HDM1	100	67.878	ENSFDAG00000016478	R3HDM1	99	74.539	Fukomys_damarensis
ENSMEUG00000011784	R3HDM1	93	42.190	ENSFHEG00000018713	r3hdm1	94	42.957	Fundulus_heteroclitus
ENSMEUG00000011784	R3HDM1	61	50.216	ENSGMOG00000006042	-	70	53.440	Gadus_morhua
ENSMEUG00000011784	R3HDM1	91	62.894	ENSGALG00000012246	R3HDM1	86	70.455	Gallus_gallus
ENSMEUG00000011784	R3HDM1	79	46.503	ENSGAFG00000006203	r3hdm1	88	45.050	Gambusia_affinis
ENSMEUG00000011784	R3HDM1	85	44.078	ENSGACG00000014925	r3hdm1	89	43.027	Gasterosteus_aculeatus
ENSMEUG00000011784	R3HDM1	99	70.782	ENSGAGG00000007840	R3HDM1	89	69.959	Gopherus_agassizii
ENSMEUG00000011784	R3HDM1	100	72.635	ENSGGOG00000008156	R3HDM1	100	70.471	Gorilla_gorilla
ENSMEUG00000011784	R3HDM1	52	46.743	ENSHBUG00000015737	R3HDM1	90	46.552	Haplochromis_burtoni
ENSMEUG00000011784	R3HDM1	100	68.442	ENSHGLG00000015718	R3HDM1	99	74.723	Heterocephalus_glaber_female
ENSMEUG00000011784	R3HDM1	100	68.343	ENSHGLG00100003184	-	91	74.376	Heterocephalus_glaber_male
ENSMEUG00000011784	R3HDM1	99	57.700	ENSHGLG00100015374	-	91	57.803	Heterocephalus_glaber_male
ENSMEUG00000011784	R3HDM1	91	35.345	ENSHCOG00000013366	r3hdm1	88	45.750	Hippocampus_comes
ENSMEUG00000011784	R3HDM1	84	50.965	ENSIPUG00000013629	r3hdm1	80	51.538	Ictalurus_punctatus
ENSMEUG00000011784	R3HDM1	93	58.065	ENSIPUG00000001676	R3HDM1	94	59.908	Ictalurus_punctatus
ENSMEUG00000011784	R3HDM1	100	72.838	ENSSTOG00000007572	R3HDM1	99	76.937	Ictidomys_tridecemlineatus
ENSMEUG00000011784	R3HDM1	50	42.209	ENSLBEG00000027981	-	99	40.504	Labrus_bergylta
ENSMEUG00000011784	R3HDM1	89	77.689	ENSLACG00000005334	R3HDM1	84	78.088	Latimeria_chalumnae
ENSMEUG00000011784	R3HDM1	94	67.331	ENSLOCG00000001641	r3hdm1	85	67.729	Lepisosteus_oculatus
ENSMEUG00000011784	R3HDM1	100	70.542	ENSLAFG00000009065	R3HDM1	89	70.542	Loxodonta_africana
ENSMEUG00000011784	R3HDM1	100	72.838	ENSMFAG00000030331	R3HDM1	89	72.635	Macaca_fascicularis
ENSMEUG00000011784	R3HDM1	100	72.811	ENSMMUG00000009844	R3HDM1	89	72.607	Macaca_mulatta
ENSMEUG00000011784	R3HDM1	100	72.709	ENSMNEG00000027793	R3HDM1	89	72.505	Macaca_nemestrina
ENSMEUG00000011784	R3HDM1	100	72.940	ENSMLEG00000043189	R3HDM1	89	72.737	Mandrillus_leucophaeus
ENSMEUG00000011784	R3HDM1	93	42.976	ENSMAMG00000004532	r3hdm1	94	42.897	Mastacembelus_armatus
ENSMEUG00000011784	R3HDM1	93	44.351	ENSMZEG00005003157	r3hdm1	94	43.654	Maylandia_zebra
ENSMEUG00000011784	R3HDM1	99	69.825	ENSMGAG00000012461	R3HDM1	89	69.619	Meleagris_gallopavo
ENSMEUG00000011784	R3HDM1	100	68.627	ENSMAUG00000010315	R3hdm1	85	73.253	Mesocricetus_auratus
ENSMEUG00000011784	R3HDM1	92	67.886	ENSMICG00000042655	-	92	68.699	Microcebus_murinus
ENSMEUG00000011784	R3HDM1	100	71.748	ENSMICG00000005900	-	89	71.850	Microcebus_murinus
ENSMEUG00000011784	R3HDM1	56	74.539	ENSMOCG00000019833	-	94	74.612	Microtus_ochrogaster
ENSMEUG00000011784	R3HDM1	95	95.142	ENSMODG00000000923	R3HDM1	90	95.142	Monodelphis_domestica
ENSMEUG00000011784	R3HDM1	100	39.244	ENSMALG00000009000	r3hdm1	90	39.067	Monopterus_albus
ENSMEUG00000011784	R3HDM1	100	68.571	MGP_CAROLIEiJ_G0014543	R3hdm1	94	74.612	Mus_caroli
ENSMEUG00000011784	R3HDM1	100	68.079	ENSMUSG00000056211	R3hdm1	94	74.612	Mus_musculus
ENSMEUG00000011784	R3HDM1	100	67.783	MGP_PahariEiJ_G0027779	R3hdm1	94	74.031	Mus_pahari
ENSMEUG00000011784	R3HDM1	100	68.276	MGP_SPRETEiJ_G0015350	R3hdm1	94	74.806	Mus_spretus
ENSMEUG00000011784	R3HDM1	100	73.700	ENSMPUG00000002412	R3HDM1	89	73.802	Mustela_putorius_furo
ENSMEUG00000011784	R3HDM1	100	72.211	ENSMLUG00000013824	R3HDM1	89	72.008	Myotis_lucifugus
ENSMEUG00000011784	R3HDM1	100	72.737	ENSNLEG00000008622	R3HDM1	89	72.607	Nomascus_leucogenys
ENSMEUG00000011784	R3HDM1	100	67.618	ENSODEG00000008607	R3HDM1	91	74.376	Octodon_degus
ENSMEUG00000011784	R3HDM1	94	41.607	ENSONIG00000012017	r3hdm1	88	41.121	Oreochromis_niloticus
ENSMEUG00000011784	R3HDM1	99	73.183	ENSOANG00000007987	R3HDM1	89	73.081	Ornithorhynchus_anatinus
ENSMEUG00000011784	R3HDM1	100	72.301	ENSOCUG00000017366	R3HDM1	98	72.301	Oryctolagus_cuniculus
ENSMEUG00000011784	R3HDM1	85	45.385	ENSORLG00000004297	r3hdm1	87	45.192	Oryzias_latipes
ENSMEUG00000011784	R3HDM1	89	42.857	ENSORLG00015017355	r3hdm1	94	42.023	Oryzias_latipes_hsok
ENSMEUG00000011784	R3HDM1	52	44.742	ENSOMEG00000003882	-	94	44.742	Oryzias_melastigma
ENSMEUG00000011784	R3HDM1	95	78.543	ENSOGAG00000003136	R3HDM1	84	79.352	Otolemur_garnettii
ENSMEUG00000011784	R3HDM1	100	72.821	ENSOARG00000010788	R3HDM1	89	72.923	Ovis_aries
ENSMEUG00000011784	R3HDM1	100	72.792	ENSPPAG00000027858	R3HDM1	89	72.663	Pan_paniscus
ENSMEUG00000011784	R3HDM1	99	73.517	ENSPPRG00000002626	R3HDM1	89	73.620	Panthera_pardus
ENSMEUG00000011784	R3HDM1	99	73.517	ENSPTIG00000016581	R3HDM1	89	73.620	Panthera_tigris_altaica
ENSMEUG00000011784	R3HDM1	100	72.866	ENSPTRG00000012494	R3HDM1	89	72.737	Pan_troglodytes
ENSMEUG00000011784	R3HDM1	100	72.940	ENSPANG00000026448	R3HDM1	89	72.737	Papio_anubis
ENSMEUG00000011784	R3HDM1	93	60.159	ENSPKIG00000004328	r3hdm1	81	59.761	Paramormyrops_kingsleyae
ENSMEUG00000011784	R3HDM1	100	70.637	ENSPSIG00000012915	R3HDM1	89	70.329	Pelodiscus_sinensis
ENSMEUG00000011784	R3HDM1	100	68.571	ENSPEMG00000015187	R3hdm1	85	73.253	Peromyscus_maniculatus_bairdii
ENSMEUG00000011784	R3HDM1	74	42.782	ENSPMAG00000003369	-	86	40.741	Petromyzon_marinus
ENSMEUG00000011784	R3HDM1	95	97.166	ENSPCIG00000002491	R3HDM1	85	97.166	Phascolarctos_cinereus
ENSMEUG00000011784	R3HDM1	93	41.867	ENSPFOG00000015036	r3hdm1	94	41.755	Poecilia_formosa
ENSMEUG00000011784	R3HDM1	81	44.868	ENSPLAG00000018042	r3hdm1	88	45.033	Poecilia_latipinna
ENSMEUG00000011784	R3HDM1	81	45.108	ENSPMEG00000023947	r3hdm1	88	45.274	Poecilia_mexicana
ENSMEUG00000011784	R3HDM1	93	44.336	ENSPREG00000007902	r3hdm1	94	43.759	Poecilia_reticulata
ENSMEUG00000011784	R3HDM1	100	72.330	ENSPPYG00000012815	R3HDM1	89	72.200	Pongo_abelii
ENSMEUG00000011784	R3HDM1	100	70.113	ENSPCAG00000006208	R3HDM1	89	70.113	Procavia_capensis
ENSMEUG00000011784	R3HDM1	100	69.817	ENSPCOG00000012698	R3HDM1	83	75.519	Propithecus_coquereli
ENSMEUG00000011784	R3HDM1	90	79.503	ENSPVAG00000006098	R3HDM1	81	79.037	Pteropus_vampyrus
ENSMEUG00000011784	R3HDM1	52	33.656	ENSPNAG00000004162	arpp21	63	41.481	Pygocentrus_nattereri
ENSMEUG00000011784	R3HDM1	90	58.904	ENSPNAG00000013952	r3hdm1	90	47.933	Pygocentrus_nattereri
ENSMEUG00000011784	R3HDM1	57	61.134	ENSPNAG00000005436	R3HDM1	61	61.538	Pygocentrus_nattereri
ENSMEUG00000011784	R3HDM1	100	67.291	ENSRNOG00000004099	R3hdm1	89	66.930	Rattus_norvegicus
ENSMEUG00000011784	R3HDM1	100	71.764	ENSRBIG00000033317	R3HDM1	89	71.792	Rhinopithecus_bieti
ENSMEUG00000011784	R3HDM1	100	72.940	ENSRROG00000034534	R3HDM1	89	72.737	Rhinopithecus_roxellana
ENSMEUG00000011784	R3HDM1	100	73.042	ENSSBOG00000020389	R3HDM1	89	72.940	Saimiri_boliviensis_boliviensis
ENSMEUG00000011784	R3HDM1	95	97.143	ENSSHAG00000016999	R3HDM1	84	97.143	Sarcophilus_harrisii
ENSMEUG00000011784	R3HDM1	93	59.761	ENSSFOG00015019851	-	90	59.761	Scleropages_formosus
ENSMEUG00000011784	R3HDM1	94	60.956	ENSSFOG00015014134	r3hdm1	85	60.956	Scleropages_formosus
ENSMEUG00000011784	R3HDM1	93	40.400	ENSSMAG00000001669	r3hdm1	85	40.518	Scophthalmus_maximus
ENSMEUG00000011784	R3HDM1	88	42.921	ENSSDUG00000010749	r3hdm1	90	43.251	Seriola_dumerili
ENSMEUG00000011784	R3HDM1	93	43.172	ENSSLDG00000004499	r3hdm1	85	43.094	Seriola_lalandi_dorsalis
ENSMEUG00000011784	R3HDM1	99	72.222	ENSSPUG00000004167	R3HDM1	89	72.222	Sphenodon_punctatus
ENSMEUG00000011784	R3HDM1	93	43.741	ENSSPAG00000004648	r3hdm1	94	43.802	Stegastes_partitus
ENSMEUG00000011784	R3HDM1	100	73.163	ENSSSCG00000015692	R3HDM1	89	73.163	Sus_scrofa
ENSMEUG00000011784	R3HDM1	99	65.776	ENSTGUG00000011750	R3HDM1	89	65.468	Taeniopygia_guttata
ENSMEUG00000011784	R3HDM1	81	43.719	ENSTRUG00000011654	r3hdm1	86	43.464	Takifugu_rubripes
ENSMEUG00000011784	R3HDM1	86	44.338	ENSTNIG00000010362	r3hdm1	88	43.922	Tetraodon_nigroviridis
ENSMEUG00000011784	R3HDM1	100	67.008	ENSTTRG00000003935	R3HDM1	89	67.008	Tursiops_truncatus
ENSMEUG00000011784	R3HDM1	79	71.871	ENSUAMG00000024806	R3HDM1	99	75.786	Ursus_americanus
ENSMEUG00000011784	R3HDM1	100	69.018	ENSUMAG00000005552	R3HDM1	89	69.121	Ursus_maritimus
ENSMEUG00000011784	R3HDM1	86	78.947	ENSVPAG00000007333	R3HDM1	76	78.947	Vicugna_pacos
ENSMEUG00000011784	R3HDM1	100	71.330	ENSVVUG00000006457	R3HDM1	89	71.626	Vulpes_vulpes
ENSMEUG00000011784	R3HDM1	93	66.379	ENSXETG00000019330	r3hdm1	99	59.631	Xenopus_tropicalis
ENSMEUG00000011784	R3HDM1	68	45.884	ENSXCOG00000017448	r3hdm1	87	45.862	Xiphophorus_couchianus
ENSMEUG00000011784	R3HDM1	90	42.717	ENSXMAG00000007885	r3hdm1	94	41.567	Xiphophorus_maculatus