EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000012834 (Gene tree)
Gene ID: -
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 29171 bases
Position: chrGeneScaffold_6633:88882-118052
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000011717	EST1	PF10374.9	1.3e-24	1	1
ENSMEUP00000011717	EST1_DNA_bind	PF10373.9	6.9e-41	1	2
ENSMEUP00000011717	EST1_DNA_bind	PF10373.9	6.9e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000012885	SMG5-201	3051	-	ENSMEUP00000011717	1016 (aa)	-	UPI0001B22605

Gene Model

Click here to download ENSMEUG00000012834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000012834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000012834	SMG5	100	87.119	ENSG00000198952	SMG5	100	88.004	Homo_sapiens
ENSMEUG00000012834	SMG5	99	66.243	ENSAPOG00000019690	smg5	99	65.748	Acanthochromis_polyacanthus
ENSMEUG00000012834	SMG5	98	84.306	ENSAMEG00000014458	SMG5	100	84.955	Ailuropoda_melanoleuca
ENSMEUG00000012834	SMG5	99	64.054	ENSACIG00000001353	smg5	99	65.138	Amphilophus_citrinellus
ENSMEUG00000012834	SMG5	98	63.861	ENSAOCG00000019483	smg5	96	64.222	Amphiprion_ocellaris
ENSMEUG00000012834	SMG5	98	65.669	ENSAPEG00000022949	smg5	98	65.669	Amphiprion_percula
ENSMEUG00000012834	SMG5	99	64.430	ENSATEG00000005348	smg5	99	66.440	Anabas_testudineus
ENSMEUG00000012834	SMG5	98	79.630	ENSAPLG00000010263	SMG5	100	79.240	Anas_platyrhynchos
ENSMEUG00000012834	SMG5	100	86.922	ENSANAG00000032899	SMG5	100	87.807	Aotus_nancymaae
ENSMEUG00000012834	SMG5	99	63.820	ENSACLG00000009311	smg5	99	64.423	Astatotilapia_calliptera
ENSMEUG00000012834	SMG5	100	87.906	ENSBTAG00000009435	SMG5	100	87.512	Bos_taurus
ENSMEUG00000012834	SMG5	99	43.092	ENSBTAG00000021747	-	99	42.650	Bos_taurus
ENSMEUG00000012834	SMG5	100	87.119	ENSCJAG00000005684	SMG5	100	88.004	Callithrix_jacchus
ENSMEUG00000012834	SMG5	100	86.136	ENSCAFG00000016839	SMG5	100	86.627	Canis_familiaris
ENSMEUG00000012834	SMG5	100	86.136	ENSCAFG00020006061	SMG5	100	86.627	Canis_lupus_dingo
ENSMEUG00000012834	SMG5	99	43.836	ENSCHIG00000006323	-	99	43.389	Capra_hircus
ENSMEUG00000012834	SMG5	100	87.807	ENSCHIG00000007709	SMG5	100	87.414	Capra_hircus
ENSMEUG00000012834	SMG5	100	86.935	ENSTSYG00000004099	SMG5	100	87.819	Carlito_syrichta
ENSMEUG00000012834	SMG5	97	65.112	ENSCAPG00000003631	SMG5	100	67.394	Cavia_aperea
ENSMEUG00000012834	SMG5	100	85.363	ENSCPOG00000015696	SMG5	100	87.426	Cavia_porcellus
ENSMEUG00000012834	SMG5	100	87.119	ENSCCAG00000027409	SMG5	100	88.004	Cebus_capucinus
ENSMEUG00000012834	SMG5	100	87.217	ENSCATG00000030539	SMG5	100	88.102	Cercocebus_atys
ENSMEUG00000012834	SMG5	100	86.051	ENSCLAG00000003983	SMG5	100	88.114	Chinchilla_lanigera
ENSMEUG00000012834	SMG5	100	87.217	ENSCSAG00000002120	SMG5	100	88.102	Chlorocebus_sabaeus
ENSMEUG00000012834	SMG5	54	87.004	ENSCHOG00000008741	-	57	87.004	Choloepus_hoffmanni
ENSMEUG00000012834	SMG5	94	78.274	ENSCPBG00000025848	SMG5	100	79.230	Chrysemys_picta_bellii
ENSMEUG00000012834	SMG5	94	33.469	ENSCING00000008706	-	99	33.570	Ciona_intestinalis
ENSMEUG00000012834	SMG5	100	83.186	ENSCANG00000029208	SMG5	100	84.071	Colobus_angolensis_palliatus
ENSMEUG00000012834	SMG5	100	85.265	ENSCGRG00001006336	Smg5	100	85.560	Cricetulus_griseus_chok1gshd
ENSMEUG00000012834	SMG5	98	85.010	ENSCGRG00000005111	Smg5	100	85.297	Cricetulus_griseus_crigri
ENSMEUG00000012834	SMG5	99	63.751	ENSCSEG00000014220	smg5	99	64.251	Cynoglossus_semilaevis
ENSMEUG00000012834	SMG5	99	58.909	ENSCVAG00000000529	smg5	99	59.144	Cyprinodon_variegatus
ENSMEUG00000012834	SMG5	92	36.143	ENSDNOG00000039862	-	100	35.406	Dasypus_novemcinctus
ENSMEUG00000012834	SMG5	100	84.071	ENSDNOG00000000051	SMG5	100	83.677	Dasypus_novemcinctus
ENSMEUG00000012834	SMG5	100	86.444	ENSDORG00000010382	Smg5	100	87.033	Dipodomys_ordii
ENSMEUG00000012834	SMG5	87	33.588	FBgn0019890	Smg5	60	33.588	Drosophila_melanogaster
ENSMEUG00000012834	SMG5	82	81.553	ENSETEG00000010336	SMG5	91	81.553	Echinops_telfairi
ENSMEUG00000012834	SMG5	90	46.269	ENSEBUG00000003739	smg5	98	46.531	Eptatretus_burgeri
ENSMEUG00000012834	SMG5	100	86.824	ENSEASG00005019122	SMG5	100	87.709	Equus_asinus_asinus
ENSMEUG00000012834	SMG5	100	86.824	ENSECAG00000001389	SMG5	100	87.709	Equus_caballus
ENSMEUG00000012834	SMG5	72	97.118	ENSEEUG00000012690	SMG5	75	97.118	Erinaceus_europaeus
ENSMEUG00000012834	SMG5	99	65.029	ENSELUG00000012585	smg5	99	64.451	Esox_lucius
ENSMEUG00000012834	SMG5	100	87.021	ENSFCAG00000011783	SMG5	100	86.627	Felis_catus
ENSMEUG00000012834	SMG5	58	83.056	ENSFALG00000001166	-	99	82.833	Ficedula_albicollis
ENSMEUG00000012834	SMG5	98	84.693	ENSFDAG00000017388	SMG5	100	86.203	Fukomys_damarensis
ENSMEUG00000012834	SMG5	97	59.514	ENSFHEG00000013939	smg5	100	59.717	Fundulus_heteroclitus
ENSMEUG00000012834	SMG5	99	77.553	ENSGALG00000029918	-	100	76.023	Gallus_gallus
ENSMEUG00000012834	SMG5	50	50.857	ENSGAFG00000021691	smg5	99	57.842	Gambusia_affinis
ENSMEUG00000012834	SMG5	99	59.196	ENSGACG00000013142	smg5	99	60.846	Gasterosteus_aculeatus
ENSMEUG00000012834	SMG5	100	80.095	ENSGAGG00000016131	SMG5	100	79.791	Gopherus_agassizii
ENSMEUG00000012834	SMG5	100	87.217	ENSGGOG00000010932	SMG5	100	88.102	Gorilla_gorilla
ENSMEUG00000012834	SMG5	99	63.636	ENSHBUG00000008654	smg5	99	64.813	Haplochromis_burtoni
ENSMEUG00000012834	SMG5	100	84.872	ENSHGLG00000019152	SMG5	100	86.346	Heterocephalus_glaber_female
ENSMEUG00000012834	SMG5	90	85.214	ENSHGLG00100015948	SMG5	99	86.857	Heterocephalus_glaber_male
ENSMEUG00000012834	SMG5	86	72.947	ENSHCOG00000010229	smg5	92	72.816	Hippocampus_comes
ENSMEUG00000012834	SMG5	99	61.405	ENSIPUG00000006624	Smg5	99	61.770	Ictalurus_punctatus
ENSMEUG00000012834	SMG5	100	86.431	ENSSTOG00000001780	SMG5	100	87.316	Ictidomys_tridecemlineatus
ENSMEUG00000012834	SMG5	100	86.163	ENSJJAG00000022763	Smg5	100	85.967	Jaculus_jaculus
ENSMEUG00000012834	SMG5	50	58.608	ENSKMAG00000014586	smg5	99	61.689	Kryptolebias_marmoratus
ENSMEUG00000012834	SMG5	99	64.485	ENSLBEG00000002145	smg5	99	64.894	Labrus_bergylta
ENSMEUG00000012834	SMG5	100	64.156	ENSLACG00000010521	SMG5	100	64.252	Latimeria_chalumnae
ENSMEUG00000012834	SMG5	96	79.108	ENSLOCG00000008380	smg5	99	62.473	Lepisosteus_oculatus
ENSMEUG00000012834	SMG5	100	86.627	ENSLAFG00000006241	SMG5	100	86.234	Loxodonta_africana
ENSMEUG00000012834	SMG5	100	87.119	ENSMFAG00000045357	SMG5	100	88.004	Macaca_fascicularis
ENSMEUG00000012834	SMG5	100	87.021	ENSMMUG00000000090	SMG5	100	87.906	Macaca_mulatta
ENSMEUG00000012834	SMG5	100	87.021	ENSMNEG00000044425	SMG5	100	87.906	Macaca_nemestrina
ENSMEUG00000012834	SMG5	100	81.195	ENSMLEG00000041192	SMG5	100	82.076	Mandrillus_leucophaeus
ENSMEUG00000012834	SMG5	63	56.907	ENSMZEG00005016543	smg5	100	56.175	Maylandia_zebra
ENSMEUG00000012834	SMG5	99	62.118	ENSMZEG00005015815	smg5	99	62.811	Maylandia_zebra
ENSMEUG00000012834	SMG5	100	84.676	ENSMAUG00000010381	Smg5	100	84.971	Mesocricetus_auratus
ENSMEUG00000012834	SMG5	100	87.217	ENSMICG00000002257	SMG5	100	88.102	Microcebus_murinus
ENSMEUG00000012834	SMG5	100	84.510	ENSMOCG00000016590	Smg5	100	84.510	Microtus_ochrogaster
ENSMEUG00000012834	SMG5	99	57.641	ENSMMOG00000017199	smg5	99	58.892	Mola_mola
ENSMEUG00000012834	SMG5	97	34.055	ENSMODG00000004511	-	99	33.498	Monodelphis_domestica
ENSMEUG00000012834	SMG5	77	37.270	ENSMODG00000004735	-	86	37.333	Monodelphis_domestica
ENSMEUG00000012834	SMG5	78	38.346	ENSMODG00000004532	-	86	38.442	Monodelphis_domestica
ENSMEUG00000012834	SMG5	87	97.745	ENSMODG00000016901	SMG5	98	97.745	Monodelphis_domestica
ENSMEUG00000012834	SMG5	75	36.434	ENSMODG00000010675	-	85	37.209	Monodelphis_domestica
ENSMEUG00000012834	SMG5	99	59.018	ENSMALG00000010375	smg5	99	59.554	Monopterus_albus
ENSMEUG00000012834	SMG5	100	85.167	MGP_CAROLIEiJ_G0025163	Smg5	100	98.324	Mus_caroli
ENSMEUG00000012834	SMG5	100	85.462	ENSMUSG00000001415	Smg5	99	98.324	Mus_musculus
ENSMEUG00000012834	SMG5	100	84.789	MGP_PahariEiJ_G0026606	Smg5	100	98.324	Mus_pahari
ENSMEUG00000012834	SMG5	100	85.265	MGP_SPRETEiJ_G0026104	Smg5	100	98.324	Mus_spretus
ENSMEUG00000012834	SMG5	94	83.912	ENSMPUG00000004546	SMG5	100	84.017	Mustela_putorius_furo
ENSMEUG00000012834	SMG5	100	86.106	ENSMLUG00000008518	SMG5	100	86.595	Myotis_lucifugus
ENSMEUG00000012834	SMG5	100	87.021	ENSNGAG00000020706	Smg5	100	87.021	Nannospalax_galili
ENSMEUG00000012834	SMG5	97	61.838	ENSNBRG00000004332	smg5	98	62.941	Neolamprologus_brichardi
ENSMEUG00000012834	SMG5	100	86.922	ENSNLEG00000012439	SMG5	100	87.807	Nomascus_leucogenys
ENSMEUG00000012834	SMG5	100	86.332	ENSOPRG00000009152	SMG5	100	85.939	Ochotona_princeps
ENSMEUG00000012834	SMG5	100	87.611	ENSODEG00000012237	SMG5	100	87.611	Octodon_degus
ENSMEUG00000012834	SMG5	99	59.735	ENSONIG00000008632	smg5	99	60.835	Oreochromis_niloticus
ENSMEUG00000012834	SMG5	91	39.806	ENSOCUG00000023338	-	99	39.590	Oryctolagus_cuniculus
ENSMEUG00000012834	SMG5	98	87.915	ENSOCUG00000012886	SMG5	100	87.513	Oryctolagus_cuniculus
ENSMEUG00000012834	SMG5	50	57.559	ENSORLG00000016239	smg5	99	61.136	Oryzias_latipes
ENSMEUG00000012834	SMG5	99	64.251	ENSORLG00020013127	smg5	99	64.488	Oryzias_latipes_hni
ENSMEUG00000012834	SMG5	99	64.160	ENSORLG00015019014	smg5	99	64.981	Oryzias_latipes_hsok
ENSMEUG00000012834	SMG5	82	59.322	ENSOMEG00000021330	smg5	92	60.560	Oryzias_melastigma
ENSMEUG00000012834	SMG5	100	87.512	ENSOGAG00000004966	SMG5	100	87.119	Otolemur_garnettii
ENSMEUG00000012834	SMG5	99	43.793	ENSOARG00000011963	-	99	43.542	Ovis_aries
ENSMEUG00000012834	SMG5	100	87.906	ENSOARG00000005778	SMG5	100	87.512	Ovis_aries
ENSMEUG00000012834	SMG5	100	87.316	ENSPPAG00000011996	SMG5	100	88.201	Pan_paniscus
ENSMEUG00000012834	SMG5	98	86.808	ENSPPRG00000011901	SMG5	100	86.103	Panthera_pardus
ENSMEUG00000012834	SMG5	96	80.714	ENSPTIG00000007892	SMG5	98	80.000	Panthera_tigris_altaica
ENSMEUG00000012834	SMG5	91	96.839	ENSPTRG00000049282	-	100	88.201	Pan_troglodytes
ENSMEUG00000012834	SMG5	100	87.316	ENSPTRG00000023925	SMG5	100	88.201	Pan_troglodytes
ENSMEUG00000012834	SMG5	100	87.217	ENSPANG00000011201	SMG5	100	88.102	Papio_anubis
ENSMEUG00000012834	SMG5	99	64.313	ENSPKIG00000009402	smg5	99	64.300	Paramormyrops_kingsleyae
ENSMEUG00000012834	SMG5	98	80.792	ENSPSIG00000015198	SMG5	100	80.495	Pelodiscus_sinensis
ENSMEUG00000012834	SMG5	99	58.456	ENSPMGG00000010465	smg5	99	58.786	Periophthalmus_magnuspinnatus
ENSMEUG00000012834	SMG5	56	46.046	ENSPEMG00000010022	-	95	44.768	Peromyscus_maniculatus_bairdii
ENSMEUG00000012834	SMG5	100	85.265	ENSPEMG00000001819	Smg5	100	85.560	Peromyscus_maniculatus_bairdii
ENSMEUG00000012834	SMG5	99	49.278	ENSPMAG00000000410	smg5	100	49.336	Petromyzon_marinus
ENSMEUG00000012834	SMG5	100	96.165	ENSPCIG00000018938	SMG5	100	96.165	Phascolarctos_cinereus
ENSMEUG00000012834	SMG5	50	58.135	ENSPFOG00000010191	smg5	99	60.842	Poecilia_formosa
ENSMEUG00000012834	SMG5	50	57.749	ENSPLAG00000009332	smg5	99	60.842	Poecilia_latipinna
ENSMEUG00000012834	SMG5	99	64.327	ENSPMEG00000014105	smg5	99	64.615	Poecilia_mexicana
ENSMEUG00000012834	SMG5	93	69.425	ENSPREG00000017713	smg5	99	61.022	Poecilia_reticulata
ENSMEUG00000012834	SMG5	100	87.414	ENSPPYG00000000723	SMG5	100	88.299	Pongo_abelii
ENSMEUG00000012834	SMG5	75	85.635	ENSPCAG00000008412	SMG5	81	85.635	Procavia_capensis
ENSMEUG00000012834	SMG5	100	86.824	ENSPCOG00000004741	SMG5	100	87.709	Propithecus_coquereli
ENSMEUG00000012834	SMG5	100	78.368	ENSPVAG00000016748	SMG5	100	79.548	Pteropus_vampyrus
ENSMEUG00000012834	SMG5	99	59.736	ENSPNYG00000013397	smg5	99	60.265	Pundamilia_nyererei
ENSMEUG00000012834	SMG5	99	61.580	ENSPNAG00000028363	smg5	99	61.826	Pygocentrus_nattereri
ENSMEUG00000012834	SMG5	100	85.462	ENSRNOG00000019590	Smg5	100	85.560	Rattus_norvegicus
ENSMEUG00000012834	SMG5	100	86.922	ENSRBIG00000027428	SMG5	100	87.807	Rhinopithecus_bieti
ENSMEUG00000012834	SMG5	100	86.824	ENSRROG00000030035	SMG5	100	87.709	Rhinopithecus_roxellana
ENSMEUG00000012834	SMG5	100	87.217	ENSSBOG00000033339	SMG5	100	88.102	Saimiri_boliviensis_boliviensis
ENSMEUG00000012834	SMG5	99	33.759	ENSSHAG00000009572	-	78	44.162	Sarcophilus_harrisii
ENSMEUG00000012834	SMG5	65	40.805	ENSSHAG00000000935	-	85	39.120	Sarcophilus_harrisii
ENSMEUG00000012834	SMG5	86	38.058	ENSSHAG00000000561	-	85	39.896	Sarcophilus_harrisii
ENSMEUG00000012834	SMG5	98	95.491	ENSSHAG00000014163	SMG5	100	95.491	Sarcophilus_harrisii
ENSMEUG00000012834	SMG5	99	65.564	ENSSFOG00015024175	smg5	99	65.659	Scleropages_formosus
ENSMEUG00000012834	SMG5	99	59.858	ENSSMAG00000013059	smg5	99	60.213	Scophthalmus_maximus
ENSMEUG00000012834	SMG5	50	59.341	ENSSDUG00000007122	smg5	55	55.987	Seriola_dumerili
ENSMEUG00000012834	SMG5	99	59.419	ENSSLDG00000011418	smg5	93	77.700	Seriola_lalandi_dorsalis
ENSMEUG00000012834	SMG5	90	75.599	ENSSARG00000012484	SMG5	100	75.163	Sorex_araneus
ENSMEUG00000012834	SMG5	94	77.834	ENSSPUG00000002260	SMG5	100	77.429	Sphenodon_punctatus
ENSMEUG00000012834	SMG5	99	64.210	ENSSPAG00000014266	smg5	98	64.390	Stegastes_partitus
ENSMEUG00000012834	SMG5	51	37.879	ENSSSCG00000037182	-	65	42.532	Sus_scrofa
ENSMEUG00000012834	SMG5	99	67.941	ENSSSCG00000039308	-	100	68.824	Sus_scrofa
ENSMEUG00000012834	SMG5	100	87.119	ENSSSCG00000006490	-	100	88.004	Sus_scrofa
ENSMEUG00000012834	SMG5	99	80.929	ENSTGUG00000003748	-	100	80.780	Taeniopygia_guttata
ENSMEUG00000012834	SMG5	99	63.285	ENSTRUG00000012580	smg5	99	62.899	Takifugu_rubripes
ENSMEUG00000012834	SMG5	99	64.334	ENSTNIG00000010303	smg5	99	64.043	Tetraodon_nigroviridis
ENSMEUG00000012834	SMG5	60	99.015	ENSTBEG00000002777	SMG5	60	99.015	Tupaia_belangeri
ENSMEUG00000012834	SMG5	100	82.498	ENSTTRG00000001401	SMG5	100	83.382	Tursiops_truncatus
ENSMEUG00000012834	SMG5	100	85.349	ENSUAMG00000013721	SMG5	100	85.349	Ursus_americanus
ENSMEUG00000012834	SMG5	99	80.517	ENSUMAG00000018041	SMG5	99	79.423	Ursus_maritimus
ENSMEUG00000012834	SMG5	98	79.133	ENSVPAG00000009446	SMG5	99	78.730	Vicugna_pacos
ENSMEUG00000012834	SMG5	100	86.037	ENSVVUG00000005887	SMG5	100	86.529	Vulpes_vulpes
ENSMEUG00000012834	SMG5	77	65.365	ENSXETG00000033791	SMG5	99	64.736	Xenopus_tropicalis
ENSMEUG00000012834	SMG5	99	64.369	ENSXMAG00000013499	smg5	99	64.403	Xiphophorus_maculatus