EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000013117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 63233 bases
Position: chrGeneScaffold_10149:13512-76744
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000011977	CPSF73-100_C	PF11718.8	1.5e-39	1	1
ENSMEUP00000011977	Beta-Casp	PF10996.8	8.5e-17	1	1
ENSMEUP00000011977	Lactamase_B	PF00753.27	2e-09	1	1
ENSMEUP00000011977	RMMBL	PF07521.12	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000013169	-	2055	-	ENSMEUP00000011977	684 (aa)	-	UPI0001B21E22

Gene Model

Click here to download ENSMEUG00000013117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000013117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000013117	-	100	65.497	ENSG00000119203	CPSF3	99	66.718	Homo_sapiens
ENSMEUG00000013117	-	73	59.118	ENSAPOG00000012241	CPSF3	54	100.000	Acanthochromis_polyacanthus
ENSMEUG00000013117	-	99	55.376	ENSAPOG00000022087	cpsf3	98	55.228	Acanthochromis_polyacanthus
ENSMEUG00000013117	-	100	65.497	ENSAMEG00000008493	CPSF3	100	65.497	Ailuropoda_melanoleuca
ENSMEUG00000013117	-	92	53.025	ENSACIG00000009846	cpsf3	99	53.025	Amphilophus_citrinellus
ENSMEUG00000013117	-	92	55.873	ENSACIG00000023663	CPSF3	99	55.873	Amphilophus_citrinellus
ENSMEUG00000013117	-	99	57.353	ENSAOCG00000010077	CPSF3	98	57.353	Amphiprion_ocellaris
ENSMEUG00000013117	-	99	55.523	ENSAOCG00000022056	cpsf3	94	59.423	Amphiprion_ocellaris
ENSMEUG00000013117	-	99	55.670	ENSAPEG00000019526	cpsf3	98	55.523	Amphiprion_percula
ENSMEUG00000013117	-	99	57.353	ENSAPEG00000021167	CPSF3	98	57.353	Amphiprion_percula
ENSMEUG00000013117	-	99	52.601	ENSATEG00000014525	CPSF3	98	52.601	Anabas_testudineus
ENSMEUG00000013117	-	99	54.934	ENSATEG00000003959	cpsf3	98	54.934	Anabas_testudineus
ENSMEUG00000013117	-	94	64.861	ENSAPLG00000006941	CPSF3	95	64.861	Anas_platyrhynchos
ENSMEUG00000013117	-	93	61.732	ENSACAG00000001759	CPSF3	99	61.417	Anolis_carolinensis
ENSMEUG00000013117	-	100	59.503	ENSANAG00000031254	CPSF3	100	59.503	Aotus_nancymaae
ENSMEUG00000013117	-	91	64.683	ENSACLG00000014484	cpsf3	99	53.344	Astatotilapia_calliptera
ENSMEUG00000013117	-	92	56.190	ENSACLG00000018846	CPSF3	99	56.190	Astatotilapia_calliptera
ENSMEUG00000013117	-	99	56.471	ENSAMXG00000004786	cpsf3	98	56.471	Astyanax_mexicanus
ENSMEUG00000013117	-	100	65.497	ENSBTAG00000019735	CPSF3	100	65.497	Bos_taurus
ENSMEUG00000013117	-	77	54.630	WBGene00013460	cpsf-3	76	54.630	Caenorhabditis_elegans
ENSMEUG00000013117	-	100	65.497	ENSCJAG00000006276	CPSF3	100	65.497	Callithrix_jacchus
ENSMEUG00000013117	-	100	65.497	ENSCAFG00000003375	CPSF3	95	65.497	Canis_familiaris
ENSMEUG00000013117	-	90	67.476	ENSCAFG00020026799	CPSF3	99	67.476	Canis_lupus_dingo
ENSMEUG00000013117	-	100	65.497	ENSCHIG00000013973	CPSF3	100	65.497	Capra_hircus
ENSMEUG00000013117	-	100	65.351	ENSTSYG00000002967	CPSF3	100	65.351	Carlito_syrichta
ENSMEUG00000013117	-	94	65.325	ENSCAPG00000013851	CPSF3	97	65.325	Cavia_aperea
ENSMEUG00000013117	-	100	64.181	ENSCPOG00000011299	CPSF3	100	64.181	Cavia_porcellus
ENSMEUG00000013117	-	100	65.497	ENSCCAG00000036730	CPSF3	100	65.497	Cebus_capucinus
ENSMEUG00000013117	-	100	62.920	ENSCATG00000014770	CPSF3	99	66.093	Cercocebus_atys
ENSMEUG00000013117	-	100	64.181	ENSCLAG00000002727	CPSF3	100	64.181	Chinchilla_lanigera
ENSMEUG00000013117	-	84	70.000	ENSCSAG00000007125	CPSF3	91	70.000	Chlorocebus_sabaeus
ENSMEUG00000013117	-	75	72.407	ENSCHOG00000000180	CPSF3	77	72.407	Choloepus_hoffmanni
ENSMEUG00000013117	-	99	63.196	ENSCPBG00000014074	CPSF3	98	63.382	Chrysemys_picta_bellii
ENSMEUG00000013117	-	90	46.992	ENSCING00000007214	-	88	46.992	Ciona_intestinalis
ENSMEUG00000013117	-	84	63.298	ENSCANG00000034435	CPSF3	88	63.298	Colobus_angolensis_palliatus
ENSMEUG00000013117	-	100	64.766	ENSCGRG00001013134	Cpsf3	100	64.766	Cricetulus_griseus_chok1gshd
ENSMEUG00000013117	-	100	64.766	ENSCGRG00000018319	Cpsf3	100	64.766	Cricetulus_griseus_crigri
ENSMEUG00000013117	-	99	56.241	ENSCSEG00000002021	CPSF3	99	57.585	Cynoglossus_semilaevis
ENSMEUG00000013117	-	99	57.794	ENSCVAG00000015067	CPSF3	98	57.794	Cyprinodon_variegatus
ENSMEUG00000013117	-	99	57.647	ENSDARG00000027649	cpsf3	98	57.647	Danio_rerio
ENSMEUG00000013117	-	100	64.234	ENSDNOG00000008940	CPSF3	95	64.234	Dasypus_novemcinctus
ENSMEUG00000013117	-	90	67.314	ENSDORG00000014263	Cpsf3	95	67.314	Dipodomys_ordii
ENSMEUG00000013117	-	88	46.844	FBgn0261065	Cpsf73	88	46.844	Drosophila_melanogaster
ENSMEUG00000013117	-	74	78.758	ENSETEG00000003893	CPSF3	78	78.758	Echinops_telfairi
ENSMEUG00000013117	-	99	52.149	ENSEBUG00000009018	cpsf3	98	52.149	Eptatretus_burgeri
ENSMEUG00000013117	-	100	65.497	ENSEASG00005003970	CPSF3	100	65.497	Equus_asinus_asinus
ENSMEUG00000013117	-	100	65.497	ENSECAG00000019911	CPSF3	100	65.497	Equus_caballus
ENSMEUG00000013117	-	77	78.539	ENSEEUG00000015422	CPSF3	77	78.539	Erinaceus_europaeus
ENSMEUG00000013117	-	99	57.206	ENSELUG00000013775	cpsf3	98	57.206	Esox_lucius
ENSMEUG00000013117	-	100	65.497	ENSFCAG00000007852	CPSF3	99	66.718	Felis_catus
ENSMEUG00000013117	-	94	64.861	ENSFALG00000006572	CPSF3	99	64.861	Ficedula_albicollis
ENSMEUG00000013117	-	99	63.783	ENSFDAG00000006317	CPSF3	99	63.783	Fukomys_damarensis
ENSMEUG00000013117	-	99	54.934	ENSFHEG00000014774	cpsf3	98	54.934	Fundulus_heteroclitus
ENSMEUG00000013117	-	99	56.324	ENSGMOG00000003157	cpsf3	98	56.324	Gadus_morhua
ENSMEUG00000013117	-	99	62.996	ENSGALG00000016424	CPSF3	99	63.622	Gallus_gallus
ENSMEUG00000013117	-	99	57.437	ENSGAFG00000008016	CPSF3	98	57.437	Gambusia_affinis
ENSMEUG00000013117	-	93	52.673	ENSGAFG00000019449	cpsf3	99	52.673	Gambusia_affinis
ENSMEUG00000013117	-	68	64.026	ENSGAGG00000025583	CPSF3	93	64.026	Gopherus_agassizii
ENSMEUG00000013117	-	91	81.416	ENSGGOG00000001757	CPSF3	89	81.416	Gorilla_gorilla
ENSMEUG00000013117	-	99	55.066	ENSHBUG00000001188	cpsf3	99	55.066	Haplochromis_burtoni
ENSMEUG00000013117	-	54	60.647	ENSHBUG00000014332	CPSF3	91	60.647	Haplochromis_burtoni
ENSMEUG00000013117	-	100	63.743	ENSHGLG00000000666	CPSF3	99	63.743	Heterocephalus_glaber_female
ENSMEUG00000013117	-	100	63.743	ENSHGLG00100007765	CPSF3	99	63.743	Heterocephalus_glaber_male
ENSMEUG00000013117	-	99	54.692	ENSHCOG00000007251	cpsf3	99	54.692	Hippocampus_comes
ENSMEUG00000013117	-	99	56.176	ENSHCOG00000015957	CPSF3	97	56.176	Hippocampus_comes
ENSMEUG00000013117	-	99	55.882	ENSIPUG00000023488	cpsf3	98	55.882	Ictalurus_punctatus
ENSMEUG00000013117	-	100	65.497	ENSSTOG00000004476	CPSF3	100	65.497	Ictidomys_tridecemlineatus
ENSMEUG00000013117	-	100	64.474	ENSJJAG00000023415	Cpsf3	100	64.474	Jaculus_jaculus
ENSMEUG00000013117	-	99	57.353	ENSKMAG00000007317	CPSF3	98	57.353	Kryptolebias_marmoratus
ENSMEUG00000013117	-	99	54.345	ENSKMAG00000002806	cpsf3	98	54.345	Kryptolebias_marmoratus
ENSMEUG00000013117	-	99	52.872	ENSLBEG00000020569	cpsf3	94	52.577	Labrus_bergylta
ENSMEUG00000013117	-	90	60.163	ENSLBEG00000013492	CPSF3	93	60.163	Labrus_bergylta
ENSMEUG00000013117	-	99	53.019	ENSLACG00000008308	CPSF3	90	61.290	Latimeria_chalumnae
ENSMEUG00000013117	-	99	59.031	ENSLOCG00000016823	cpsf3	98	59.031	Lepisosteus_oculatus
ENSMEUG00000013117	-	94	66.563	ENSLAFG00000009467	CPSF3	95	66.563	Loxodonta_africana
ENSMEUG00000013117	-	100	65.497	ENSMFAG00000001339	CPSF3	99	66.718	Macaca_fascicularis
ENSMEUG00000013117	-	94	66.718	ENSMMUG00000018038	CPSF3	99	66.718	Macaca_mulatta
ENSMEUG00000013117	-	91	74.194	ENSMNEG00000039447	CPSF3	100	74.194	Macaca_nemestrina
ENSMEUG00000013117	-	100	65.497	ENSMLEG00000026825	CPSF3	100	65.497	Mandrillus_leucophaeus
ENSMEUG00000013117	-	99	55.523	ENSMAMG00000003076	cpsf3	98	55.376	Mastacembelus_armatus
ENSMEUG00000013117	-	92	55.696	ENSMAMG00000008835	CPSF3	99	55.696	Mastacembelus_armatus
ENSMEUG00000013117	-	99	57.500	ENSMZEG00005006258	CPSF3	98	57.500	Maylandia_zebra
ENSMEUG00000013117	-	99	55.066	ENSMZEG00005014358	cpsf3	99	55.066	Maylandia_zebra
ENSMEUG00000013117	-	94	64.241	ENSMGAG00000013995	CPSF3	97	64.241	Meleagris_gallopavo
ENSMEUG00000013117	-	54	73.046	ENSMAUG00000000166	Cpsf3	99	73.046	Mesocricetus_auratus
ENSMEUG00000013117	-	100	60.088	ENSMICG00000002363	CPSF3	100	60.469	Microcebus_murinus
ENSMEUG00000013117	-	100	64.912	ENSMOCG00000020067	Cpsf3	100	64.912	Microtus_ochrogaster
ENSMEUG00000013117	-	56	94.643	ENSMMOG00000011923	CPSF3	75	81.250	Mola_mola
ENSMEUG00000013117	-	94	53.882	ENSMMOG00000018212	CPSF3	98	53.882	Mola_mola
ENSMEUG00000013117	-	100	65.702	ENSMODG00000014703	CPSF3	100	65.702	Monodelphis_domestica
ENSMEUG00000013117	-	99	55.653	ENSMALG00000016416	cpsf3	99	55.507	Monopterus_albus
ENSMEUG00000013117	-	93	55.659	ENSMALG00000011474	CPSF3	99	55.469	Monopterus_albus
ENSMEUG00000013117	-	100	64.620	MGP_CAROLIEiJ_G0017640	Cpsf3	100	64.620	Mus_caroli
ENSMEUG00000013117	-	100	64.620	ENSMUSG00000054309	Cpsf3	100	64.620	Mus_musculus
ENSMEUG00000013117	-	100	64.474	MGP_PahariEiJ_G0029397	Cpsf3	100	64.474	Mus_pahari
ENSMEUG00000013117	-	100	64.620	MGP_SPRETEiJ_G0018481	Cpsf3	100	64.620	Mus_spretus
ENSMEUG00000013117	-	100	64.912	ENSMPUG00000013213	CPSF3	100	64.912	Mustela_putorius_furo
ENSMEUG00000013117	-	100	64.672	ENSMLUG00000010636	CPSF3	100	64.672	Myotis_lucifugus
ENSMEUG00000013117	-	100	64.766	ENSNGAG00000019836	Cpsf3	100	64.766	Nannospalax_galili
ENSMEUG00000013117	-	92	56.190	ENSNBRG00000010525	CPSF3	99	56.190	Neolamprologus_brichardi
ENSMEUG00000013117	-	91	64.683	ENSNBRG00000004770	cpsf3	99	54.772	Neolamprologus_brichardi
ENSMEUG00000013117	-	91	81.416	ENSNLEG00000013359	CPSF3	89	81.416	Nomascus_leucogenys
ENSMEUG00000013117	-	100	73.538	ENSOPRG00000008902	CPSF3	100	73.538	Ochotona_princeps
ENSMEUG00000013117	-	100	63.889	ENSODEG00000003129	CPSF3	100	63.889	Octodon_degus
ENSMEUG00000013117	-	99	55.066	ENSONIG00000018812	cpsf3	99	54.919	Oreochromis_niloticus
ENSMEUG00000013117	-	75	68.885	ENSOANG00000008577	CPSF3	91	68.885	Ornithorhynchus_anatinus
ENSMEUG00000013117	-	100	65.643	ENSOCUG00000003728	CPSF3	100	65.643	Oryctolagus_cuniculus
ENSMEUG00000013117	-	99	53.744	ENSORLG00000018854	cpsf3	99	53.744	Oryzias_latipes
ENSMEUG00000013117	-	99	53.744	ENSORLG00020013331	cpsf3	99	53.744	Oryzias_latipes_hni
ENSMEUG00000013117	-	99	53.744	ENSORLG00015011017	cpsf3	99	53.744	Oryzias_latipes_hsok
ENSMEUG00000013117	-	99	54.185	ENSOMEG00000010647	cpsf3	94	54.185	Oryzias_melastigma
ENSMEUG00000013117	-	91	61.840	ENSOGAG00000001680	CPSF3	92	61.840	Otolemur_garnettii
ENSMEUG00000013117	-	100	65.497	ENSOARG00000015073	CPSF3	100	65.497	Ovis_aries
ENSMEUG00000013117	-	100	65.497	ENSPPAG00000042457	CPSF3	100	65.497	Pan_paniscus
ENSMEUG00000013117	-	100	65.497	ENSPPRG00000016790	CPSF3	99	66.718	Panthera_pardus
ENSMEUG00000013117	-	99	65.294	ENSPTIG00000003920	CPSF3	100	66.142	Panthera_tigris_altaica
ENSMEUG00000013117	-	100	65.497	ENSPTRG00000011638	CPSF3	100	65.497	Pan_troglodytes
ENSMEUG00000013117	-	100	65.497	ENSPANG00000016798	CPSF3	100	65.497	Papio_anubis
ENSMEUG00000013117	-	99	58.235	ENSPKIG00000023646	cpsf3	99	59.472	Paramormyrops_kingsleyae
ENSMEUG00000013117	-	94	64.087	ENSPSIG00000016144	CPSF3	95	64.087	Pelodiscus_sinensis
ENSMEUG00000013117	-	80	58.152	ENSPMGG00000006141	-	95	58.152	Periophthalmus_magnuspinnatus
ENSMEUG00000013117	-	54	59.838	ENSPMGG00000015311	CPSF3	91	59.838	Periophthalmus_magnuspinnatus
ENSMEUG00000013117	-	100	65.058	ENSPEMG00000017668	Cpsf3	100	65.058	Peromyscus_maniculatus_bairdii
ENSMEUG00000013117	-	69	67.265	ENSPMAG00000004841	cpsf3	87	67.265	Petromyzon_marinus
ENSMEUG00000013117	-	80	84.932	ENSPCIG00000009823	CPSF3	87	84.932	Phascolarctos_cinereus
ENSMEUG00000013117	-	99	54.692	ENSPFOG00000015922	cpsf3	99	54.692	Poecilia_formosa
ENSMEUG00000013117	-	99	57.143	ENSPFOG00000010418	-	98	57.143	Poecilia_formosa
ENSMEUG00000013117	-	54	60.270	ENSPLAG00000021300	-	91	60.270	Poecilia_latipinna
ENSMEUG00000013117	-	99	54.692	ENSPLAG00000000882	cpsf3	99	54.692	Poecilia_latipinna
ENSMEUG00000013117	-	99	54.839	ENSPMEG00000018309	cpsf3	99	54.839	Poecilia_mexicana
ENSMEUG00000013117	-	99	52.135	ENSPREG00000004482	CPSF3	98	52.135	Poecilia_reticulata
ENSMEUG00000013117	-	93	53.145	ENSPREG00000014875	cpsf3	99	53.145	Poecilia_reticulata
ENSMEUG00000013117	-	87	74.194	ENSPPYG00000012666	CPSF3	91	74.194	Pongo_abelii
ENSMEUG00000013117	-	70	56.712	ENSPCAG00000015042	CPSF3	74	56.712	Procavia_capensis
ENSMEUG00000013117	-	84	67.984	ENSPCOG00000023016	CPSF3	93	67.984	Propithecus_coquereli
ENSMEUG00000013117	-	99	65.154	ENSPVAG00000005324	CPSF3	99	65.154	Pteropus_vampyrus
ENSMEUG00000013117	-	79	60.405	ENSPNYG00000021047	CPSF3	91	60.405	Pundamilia_nyererei
ENSMEUG00000013117	-	99	55.066	ENSPNYG00000004405	cpsf3	99	55.066	Pundamilia_nyererei
ENSMEUG00000013117	-	99	55.882	ENSPNAG00000023060	cpsf3	98	55.882	Pygocentrus_nattereri
ENSMEUG00000013117	-	99	64.516	ENSRNOG00000052418	Cpsf3	99	64.516	Rattus_norvegicus
ENSMEUG00000013117	-	88	75.676	ENSRBIG00000041615	CPSF3	90	75.676	Rhinopithecus_bieti
ENSMEUG00000013117	-	100	65.497	ENSRROG00000033792	CPSF3	100	65.497	Rhinopithecus_roxellana
ENSMEUG00000013117	-	83	73.333	ENSSBOG00000027263	CPSF3	83	73.333	Saimiri_boliviensis_boliviensis
ENSMEUG00000013117	-	100	67.105	ENSSHAG00000007024	CPSF3	100	67.105	Sarcophilus_harrisii
ENSMEUG00000013117	-	99	58.003	ENSSFOG00015002108	cpsf3	99	58.610	Scleropages_formosus
ENSMEUG00000013117	-	87	60.540	ENSSMAG00000020534	CPSF3	89	60.540	Scophthalmus_maximus
ENSMEUG00000013117	-	99	55.066	ENSSDUG00000002828	cpsf3	96	54.919	Seriola_dumerili
ENSMEUG00000013117	-	99	57.206	ENSSDUG00000018498	CPSF3	98	57.206	Seriola_dumerili
ENSMEUG00000013117	-	99	57.206	ENSSLDG00000005234	CPSF3	98	57.206	Seriola_lalandi_dorsalis
ENSMEUG00000013117	-	99	55.066	ENSSLDG00000008469	cpsf3	96	54.919	Seriola_lalandi_dorsalis
ENSMEUG00000013117	-	100	65.936	ENSSARG00000005186	CPSF3	100	65.936	Sorex_araneus
ENSMEUG00000013117	-	86	71.628	ENSSPUG00000015525	CPSF3	85	71.628	Sphenodon_punctatus
ENSMEUG00000013117	-	99	55.670	ENSSPAG00000018579	cpsf3	98	55.523	Stegastes_partitus
ENSMEUG00000013117	-	99	57.353	ENSSPAG00000002906	CPSF3	98	57.353	Stegastes_partitus
ENSMEUG00000013117	-	99	65.447	ENSSSCG00000020799	CPSF3	99	65.447	Sus_scrofa
ENSMEUG00000013117	-	99	63.436	ENSTGUG00000013016	CPSF3	99	63.436	Taeniopygia_guttata
ENSMEUG00000013117	-	54	52.011	ENSTRUG00000013905	CPSF3	90	52.011	Takifugu_rubripes
ENSMEUG00000013117	-	99	54.639	ENSTRUG00000007030	cpsf3	97	54.639	Takifugu_rubripes
ENSMEUG00000013117	-	77	81.416	ENSTBEG00000002707	CPSF3	76	81.416	Tupaia_belangeri
ENSMEUG00000013117	-	64	100.000	ENSTTRG00000000861	CPSF3	64	100.000	Tursiops_truncatus
ENSMEUG00000013117	-	99	62.610	ENSUAMG00000007535	CPSF3	89	67.476	Ursus_americanus
ENSMEUG00000013117	-	94	66.718	ENSUMAG00000003676	CPSF3	99	66.718	Ursus_maritimus
ENSMEUG00000013117	-	81	68.223	ENSVPAG00000008041	CPSF3	88	68.223	Vicugna_pacos
ENSMEUG00000013117	-	100	65.497	ENSVVUG00000002194	CPSF3	100	65.497	Vulpes_vulpes
ENSMEUG00000013117	-	99	58.798	ENSXETG00000008263	cpsf3	99	58.798	Xenopus_tropicalis
ENSMEUG00000013117	-	54	60.811	ENSXCOG00000000957	-	86	60.811	Xiphophorus_couchianus
ENSMEUG00000013117	-	99	54.692	ENSXCOG00000019695	cpsf3	99	54.692	Xiphophorus_couchianus
ENSMEUG00000013117	-	99	57.437	ENSXMAG00000027291	CPSF3	98	57.437	Xiphophorus_maculatus
ENSMEUG00000013117	-	99	54.692	ENSXMAG00000009784	cpsf3	99	55.814	Xiphophorus_maculatus