EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000013256 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 12558 bases
Position: chrScaffold18634:8736-21293
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000012092	PRP4	PF08799.11	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000013298	PRPF4-201	1545	-	ENSMEUP00000012092	514 (aa)	-	UPI0001B2016E

Gene Model

Click here to download ENSMEUG00000013256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000013256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000013256	PRPF4	56	35.802	ENSMEUG00000004011	TBL3	55	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000013256	PRPF4	100	95.331	ENSG00000136875	PRPF4	99	94.942	Homo_sapiens
ENSMEUG00000013256	PRPF4	98	77.131	ENSAPOG00000014132	prpf4	99	76.812	Acanthochromis_polyacanthus
ENSMEUG00000013256	PRPF4	100	95.136	ENSAMEG00000013048	PRPF4	96	95.136	Ailuropoda_melanoleuca
ENSMEUG00000013256	PRPF4	98	76.529	ENSACIG00000005579	prpf4	99	76.529	Amphilophus_citrinellus
ENSMEUG00000013256	PRPF4	98	75.984	ENSAOCG00000005457	prpf4	99	75.686	Amphiprion_ocellaris
ENSMEUG00000013256	PRPF4	98	75.787	ENSAPEG00000000776	prpf4	99	75.490	Amphiprion_percula
ENSMEUG00000013256	PRPF4	98	76.134	ENSATEG00000023013	prpf4	99	75.835	Anabas_testudineus
ENSMEUG00000013256	PRPF4	99	89.824	ENSAPLG00000006534	PRPF4	95	89.824	Anas_platyrhynchos
ENSMEUG00000013256	PRPF4	99	89.824	ENSACAG00000015110	PRPF4	98	89.824	Anolis_carolinensis
ENSMEUG00000013256	PRPF4	100	95.136	ENSANAG00000022464	PRPF4	95	95.136	Aotus_nancymaae
ENSMEUG00000013256	PRPF4	98	75.542	ENSACLG00000019031	prpf4	99	75.246	Astatotilapia_calliptera
ENSMEUG00000013256	PRPF4	98	62.380	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSMEUG00000013256	PRPF4	100	94.747	ENSBTAG00000004571	PRPF4	99	94.747	Bos_taurus
ENSMEUG00000013256	PRPF4	92	43.633	WBGene00007972	prp-4	96	43.633	Caenorhabditis_elegans
ENSMEUG00000013256	PRPF4	100	95.525	ENSCJAG00000017856	PRPF4	98	95.499	Callithrix_jacchus
ENSMEUG00000013256	PRPF4	100	95.136	ENSCAFG00000003224	PRPF4	96	95.136	Canis_familiaris
ENSMEUG00000013256	PRPF4	100	95.525	ENSCAFG00020022637	PRPF4	99	95.136	Canis_lupus_dingo
ENSMEUG00000013256	PRPF4	100	95.331	ENSCHIG00000024648	-	98	95.303	Capra_hircus
ENSMEUG00000013256	PRPF4	100	94.942	ENSTSYG00000010366	PRPF4	99	94.942	Carlito_syrichta
ENSMEUG00000013256	PRPF4	88	87.835	ENSCAPG00000008935	PRPF4	97	86.635	Cavia_aperea
ENSMEUG00000013256	PRPF4	100	94.358	ENSCPOG00000010747	-	99	94.358	Cavia_porcellus
ENSMEUG00000013256	PRPF4	100	89.105	ENSCPOG00000014729	-	99	89.105	Cavia_porcellus
ENSMEUG00000013256	PRPF4	100	95.331	ENSCCAG00000028990	PRPF4	99	95.331	Cebus_capucinus
ENSMEUG00000013256	PRPF4	98	96.245	ENSCATG00000021552	PRPF4	99	95.331	Cercocebus_atys
ENSMEUG00000013256	PRPF4	100	94.553	ENSCLAG00000013448	PRPF4	99	94.553	Chinchilla_lanigera
ENSMEUG00000013256	PRPF4	88	94.248	ENSCHOG00000007233	PRPF4	100	94.248	Choloepus_hoffmanni
ENSMEUG00000013256	PRPF4	98	91.881	ENSCPBG00000019136	PRPF4	73	91.881	Chrysemys_picta_bellii
ENSMEUG00000013256	PRPF4	96	60.362	ENSCING00000001299	-	95	59.717	Ciona_intestinalis
ENSMEUG00000013256	PRPF4	98	57.534	ENSCSAVG00000009178	-	99	59.307	Ciona_savignyi
ENSMEUG00000013256	PRPF4	100	95.136	ENSCANG00000003246	PRPF4	99	95.136	Colobus_angolensis_palliatus
ENSMEUG00000013256	PRPF4	100	95.136	ENSCGRG00001016992	Prpf4	99	95.136	Cricetulus_griseus_chok1gshd
ENSMEUG00000013256	PRPF4	100	95.136	ENSCGRG00000017560	Prpf4	99	95.136	Cricetulus_griseus_crigri
ENSMEUG00000013256	PRPF4	98	74.851	ENSCSEG00000020451	prpf4	99	74.851	Cynoglossus_semilaevis
ENSMEUG00000013256	PRPF4	98	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSMEUG00000013256	PRPF4	100	95.136	ENSDNOG00000013203	PRPF4	98	95.136	Dasypus_novemcinctus
ENSMEUG00000013256	PRPF4	100	95.136	ENSDORG00000026275	Prpf4	99	95.136	Dipodomys_ordii
ENSMEUG00000013256	PRPF4	88	56.236	FBgn0036733	U4-U6-60K	99	49.818	Drosophila_melanogaster
ENSMEUG00000013256	PRPF4	100	94.163	ENSETEG00000020389	PRPF4	98	94.163	Echinops_telfairi
ENSMEUG00000013256	PRPF4	98	71.493	ENSEBUG00000015229	prpf4	88	71.946	Eptatretus_burgeri
ENSMEUG00000013256	PRPF4	100	95.136	ENSEASG00005022678	PRPF4	99	95.136	Equus_asinus_asinus
ENSMEUG00000013256	PRPF4	100	95.136	ENSECAG00000007072	PRPF4	99	95.136	Equus_caballus
ENSMEUG00000013256	PRPF4	99	75.056	ENSEEUG00000007480	PRPF4	97	75.056	Erinaceus_europaeus
ENSMEUG00000013256	PRPF4	98	80.198	ENSELUG00000007510	prpf4	99	80.198	Esox_lucius
ENSMEUG00000013256	PRPF4	100	95.525	ENSFCAG00000005514	PRPF4	98	95.499	Felis_catus
ENSMEUG00000013256	PRPF4	99	87.416	ENSFALG00000005423	PRPF4	86	87.416	Ficedula_albicollis
ENSMEUG00000013256	PRPF4	100	94.358	ENSFDAG00000005839	PRPF4	99	94.358	Fukomys_damarensis
ENSMEUG00000013256	PRPF4	98	74.556	ENSFHEG00000001300	prpf4	99	74.556	Fundulus_heteroclitus
ENSMEUG00000013256	PRPF4	99	89.628	ENSGALG00000008857	PRPF4	95	89.628	Gallus_gallus
ENSMEUG00000013256	PRPF4	63	71.472	ENSGAFG00000012164	prpf4	67	71.472	Gambusia_affinis
ENSMEUG00000013256	PRPF4	98	69.094	ENSGACG00000015476	prpf4	99	68.431	Gasterosteus_aculeatus
ENSMEUG00000013256	PRPF4	99	91.389	ENSGAGG00000025029	PRPF4	95	91.389	Gopherus_agassizii
ENSMEUG00000013256	PRPF4	100	94.942	ENSGGOG00000006943	PRPF4	99	94.942	Gorilla_gorilla
ENSMEUG00000013256	PRPF4	98	75.345	ENSHBUG00000000562	prpf4	99	75.049	Haplochromis_burtoni
ENSMEUG00000013256	PRPF4	100	76.459	ENSHGLG00000003838	-	98	76.459	Heterocephalus_glaber_female
ENSMEUG00000013256	PRPF4	100	94.358	ENSHGLG00000015191	PRPF4	99	94.358	Heterocephalus_glaber_female
ENSMEUG00000013256	PRPF4	100	77.519	ENSHGLG00000016628	-	98	78.295	Heterocephalus_glaber_female
ENSMEUG00000013256	PRPF4	100	76.459	ENSHGLG00100005571	-	98	76.459	Heterocephalus_glaber_male
ENSMEUG00000013256	PRPF4	98	78.416	ENSIPUG00000017956	PRPF4	99	77.822	Ictalurus_punctatus
ENSMEUG00000013256	PRPF4	100	94.553	ENSSTOG00000027833	PRPF4	99	94.553	Ictidomys_tridecemlineatus
ENSMEUG00000013256	PRPF4	100	94.942	ENSJJAG00000008838	Prpf4	99	94.942	Jaculus_jaculus
ENSMEUG00000013256	PRPF4	98	75.148	ENSKMAG00000013236	prpf4	99	75.148	Kryptolebias_marmoratus
ENSMEUG00000013256	PRPF4	98	75.050	ENSLBEG00000020611	prpf4	99	74.753	Labrus_bergylta
ENSMEUG00000013256	PRPF4	99	80.392	ENSLACG00000016317	PRPF4	98	79.806	Latimeria_chalumnae
ENSMEUG00000013256	PRPF4	97	81.400	ENSLOCG00000000581	prpf4	99	81.400	Lepisosteus_oculatus
ENSMEUG00000013256	PRPF4	100	95.525	ENSLAFG00000018225	PRPF4	98	95.525	Loxodonta_africana
ENSMEUG00000013256	PRPF4	98	96.047	ENSMFAG00000039397	PRPF4	99	95.136	Macaca_fascicularis
ENSMEUG00000013256	PRPF4	98	96.245	ENSMMUG00000005844	PRPF4	99	95.331	Macaca_mulatta
ENSMEUG00000013256	PRPF4	98	85.573	ENSMNEG00000033737	PRPF4	99	84.825	Macaca_nemestrina
ENSMEUG00000013256	PRPF4	98	96.245	ENSMLEG00000040284	PRPF4	99	95.331	Mandrillus_leucophaeus
ENSMEUG00000013256	PRPF4	98	75.148	ENSMAMG00000020141	prpf4	99	74.853	Mastacembelus_armatus
ENSMEUG00000013256	PRPF4	98	75.542	ENSMZEG00005023205	prpf4	99	75.246	Maylandia_zebra
ENSMEUG00000013256	PRPF4	99	89.194	ENSMGAG00000001796	PRPF4	95	89.194	Meleagris_gallopavo
ENSMEUG00000013256	PRPF4	99	95.481	ENSMAUG00000018022	Prpf4	99	94.747	Mesocricetus_auratus
ENSMEUG00000013256	PRPF4	99	94.892	ENSMICG00000015022	PRPF4	98	94.892	Microcebus_murinus
ENSMEUG00000013256	PRPF4	100	94.747	ENSMOCG00000018273	Prpf4	99	94.747	Microtus_ochrogaster
ENSMEUG00000013256	PRPF4	99	73.767	ENSMMOG00000021177	prpf4	99	73.767	Mola_mola
ENSMEUG00000013256	PRPF4	100	99.027	ENSMODG00000025096	-	95	99.027	Monodelphis_domestica
ENSMEUG00000013256	PRPF4	100	98.833	ENSMODG00000004444	-	98	98.833	Monodelphis_domestica
ENSMEUG00000013256	PRPF4	98	75.542	ENSMALG00000013624	prpf4	99	75.246	Monopterus_albus
ENSMEUG00000013256	PRPF4	100	95.136	MGP_CAROLIEiJ_G0026078	Prpf4	99	95.136	Mus_caroli
ENSMEUG00000013256	PRPF4	100	95.136	ENSMUSG00000066148	Prpf4	99	95.136	Mus_musculus
ENSMEUG00000013256	PRPF4	100	94.942	MGP_PahariEiJ_G0028413	Prpf4	99	94.942	Mus_pahari
ENSMEUG00000013256	PRPF4	100	95.136	MGP_SPRETEiJ_G0027042	Prpf4	99	95.136	Mus_spretus
ENSMEUG00000013256	PRPF4	100	95.136	ENSMPUG00000007883	PRPF4	99	95.136	Mustela_putorius_furo
ENSMEUG00000013256	PRPF4	100	94.942	ENSMLUG00000015309	-	96	94.942	Myotis_lucifugus
ENSMEUG00000013256	PRPF4	100	93.191	ENSMLUG00000008626	-	96	93.191	Myotis_lucifugus
ENSMEUG00000013256	PRPF4	100	89.494	ENSNGAG00000000468	Prpf4	99	89.494	Nannospalax_galili
ENSMEUG00000013256	PRPF4	98	75.740	ENSNBRG00000007972	prpf4	99	75.442	Neolamprologus_brichardi
ENSMEUG00000013256	PRPF4	100	95.136	ENSNLEG00000016647	PRPF4	99	95.136	Nomascus_leucogenys
ENSMEUG00000013256	PRPF4	100	95.136	ENSOPRG00000005302	PRPF4	98	95.108	Ochotona_princeps
ENSMEUG00000013256	PRPF4	100	94.747	ENSODEG00000018147	PRPF4	99	94.747	Octodon_degus
ENSMEUG00000013256	PRPF4	99	74.708	ENSONIG00000012671	prpf4	99	75.542	Oreochromis_niloticus
ENSMEUG00000013256	PRPF4	100	95.331	ENSOCUG00000005046	PRPF4	99	95.331	Oryctolagus_cuniculus
ENSMEUG00000013256	PRPF4	98	74.257	ENSORLG00000019641	prpf4	99	73.964	Oryzias_latipes
ENSMEUG00000013256	PRPF4	98	74.257	ENSORLG00020019438	prpf4	99	73.964	Oryzias_latipes_hni
ENSMEUG00000013256	PRPF4	98	74.059	ENSOMEG00000020941	prpf4	99	73.750	Oryzias_melastigma
ENSMEUG00000013256	PRPF4	100	90.272	ENSOGAG00000007802	PRPF4	96	90.272	Otolemur_garnettii
ENSMEUG00000013256	PRPF4	100	94.942	ENSOARG00000006319	PRPF4	95	94.942	Ovis_aries
ENSMEUG00000013256	PRPF4	100	94.942	ENSPPAG00000041797	PRPF4	99	94.942	Pan_paniscus
ENSMEUG00000013256	PRPF4	100	95.136	ENSPPRG00000014360	PRPF4	99	95.136	Panthera_pardus
ENSMEUG00000013256	PRPF4	100	95.136	ENSPTIG00000009574	PRPF4	99	95.136	Panthera_tigris_altaica
ENSMEUG00000013256	PRPF4	100	95.331	ENSPTRG00000021274	PRPF4	98	95.303	Pan_troglodytes
ENSMEUG00000013256	PRPF4	98	96.047	ENSPANG00000025776	PRPF4	95	95.136	Papio_anubis
ENSMEUG00000013256	PRPF4	98	80.792	ENSPKIG00000017259	prpf4	99	80.792	Paramormyrops_kingsleyae
ENSMEUG00000013256	PRPF4	99	90.411	ENSPSIG00000010713	PRPF4	90	90.411	Pelodiscus_sinensis
ENSMEUG00000013256	PRPF4	98	58.505	ENSPMGG00000000997	prpf4	98	58.505	Periophthalmus_magnuspinnatus
ENSMEUG00000013256	PRPF4	100	95.136	ENSPEMG00000024115	Prpf4	99	95.136	Peromyscus_maniculatus_bairdii
ENSMEUG00000013256	PRPF4	100	99.611	ENSPCIG00000003821	PRPF4	99	99.611	Phascolarctos_cinereus
ENSMEUG00000013256	PRPF4	98	68.885	ENSPFOG00000013524	prpf4	99	71.166	Poecilia_formosa
ENSMEUG00000013256	PRPF4	84	70.948	ENSPLAG00000011620	prpf4	97	70.588	Poecilia_latipinna
ENSMEUG00000013256	PRPF4	94	72.321	ENSPMEG00000006813	prpf4	99	72.321	Poecilia_mexicana
ENSMEUG00000013256	PRPF4	100	95.331	ENSPCAG00000002561	PRPF4	99	95.331	Procavia_capensis
ENSMEUG00000013256	PRPF4	99	95.285	ENSPCOG00000011975	PRPF4	99	94.553	Propithecus_coquereli
ENSMEUG00000013256	PRPF4	99	91.977	ENSPVAG00000004708	PRPF4	98	91.977	Pteropus_vampyrus
ENSMEUG00000013256	PRPF4	98	75.542	ENSPNYG00000008013	prpf4	99	75.246	Pundamilia_nyererei
ENSMEUG00000013256	PRPF4	98	80.594	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSMEUG00000013256	PRPF4	100	94.942	ENSRNOG00000014777	Prpf4	99	94.942	Rattus_norvegicus
ENSMEUG00000013256	PRPF4	100	95.136	ENSRBIG00000040221	PRPF4	99	95.136	Rhinopithecus_bieti
ENSMEUG00000013256	PRPF4	100	95.136	ENSRROG00000040240	PRPF4	99	95.136	Rhinopithecus_roxellana
ENSMEUG00000013256	PRPF4	100	99.805	ENSSHAG00000017658	PRPF4	98	99.805	Sarcophilus_harrisii
ENSMEUG00000013256	PRPF4	97	82.600	ENSSFOG00015008963	prpf4	99	82.600	Scleropages_formosus
ENSMEUG00000013256	PRPF4	99	74.460	ENSSMAG00000008889	prpf4	99	74.460	Scophthalmus_maximus
ENSMEUG00000013256	PRPF4	99	72.189	ENSSDUG00000022083	prpf4	99	72.584	Seriola_dumerili
ENSMEUG00000013256	PRPF4	99	72.387	ENSSLDG00000008115	prpf4	99	72.781	Seriola_lalandi_dorsalis
ENSMEUG00000013256	PRPF4	99	90.766	ENSSPUG00000015582	PRPF4	98	90.766	Sphenodon_punctatus
ENSMEUG00000013256	PRPF4	98	70.196	ENSSPAG00000011286	prpf4	99	69.922	Stegastes_partitus
ENSMEUG00000013256	PRPF4	100	95.136	ENSSSCG00000024648	PRPF4	99	95.136	Sus_scrofa
ENSMEUG00000013256	PRPF4	96	90.061	ENSTGUG00000002623	PRPF4	100	90.389	Taeniopygia_guttata
ENSMEUG00000013256	PRPF4	97	74.850	ENSTRUG00000008853	prpf4	98	74.850	Takifugu_rubripes
ENSMEUG00000013256	PRPF4	97	74.251	ENSTNIG00000013250	prpf4	99	74.251	Tetraodon_nigroviridis
ENSMEUG00000013256	PRPF4	99	86.693	ENSTBEG00000000821	PRPF4	98	86.693	Tupaia_belangeri
ENSMEUG00000013256	PRPF4	83	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSMEUG00000013256	PRPF4	64	89.602	ENSUAMG00000018288	PRPF4	90	89.028	Ursus_americanus
ENSMEUG00000013256	PRPF4	100	94.553	ENSUMAG00000019375	PRPF4	99	94.553	Ursus_maritimus
ENSMEUG00000013256	PRPF4	99	95.303	ENSVPAG00000005281	PRPF4	98	95.303	Vicugna_pacos
ENSMEUG00000013256	PRPF4	100	94.015	ENSVVUG00000002476	PRPF4	99	95.644	Vulpes_vulpes
ENSMEUG00000013256	PRPF4	70	57.222	ENSXCOG00000006101	prpf4	93	58.621	Xiphophorus_couchianus
ENSMEUG00000013256	PRPF4	89	62.987	ENSXMAG00000002750	prpf4	99	64.103	Xiphophorus_maculatus