EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000013424 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 11718 bases
Position: chrScaffold24593:25277-36994
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000012245	KH_1	PF00013.29	1.1e-07	1	1
ENSMEUP00000012245	zf-CCHC	PF00098.23	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000013466	SF1-201	1590	-	ENSMEUP00000012245	529 (aa)	-	UPI0001B209F4

Gene Model

Click here to download ENSMEUG00000013424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000013424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000013424	SF1	68	82.480	ENSAPOG00000012341	sf1	58	78.537	Acanthochromis_polyacanthus
ENSMEUG00000013424	SF1	97	98.051	ENSAMEG00000017828	SF1	80	98.051	Ailuropoda_melanoleuca
ENSMEUG00000013424	SF1	68	84.341	ENSACIG00000016514	sf1	61	77.536	Amphilophus_citrinellus
ENSMEUG00000013424	SF1	68	81.941	ENSAOCG00000010934	sf1	58	77.561	Amphiprion_ocellaris
ENSMEUG00000013424	SF1	68	81.941	ENSAPEG00000009498	sf1	58	77.561	Amphiprion_percula
ENSMEUG00000013424	SF1	68	82.480	ENSATEG00000001894	sf1	58	78.293	Anabas_testudineus
ENSMEUG00000013424	SF1	100	98.305	ENSANAG00000026664	-	93	98.305	Aotus_nancymaae
ENSMEUG00000013424	SF1	96	86.837	ENSANAG00000022607	-	87	88.022	Aotus_nancymaae
ENSMEUG00000013424	SF1	69	84.973	ENSACLG00000007633	sf1	59	77.427	Astatotilapia_calliptera
ENSMEUG00000013424	SF1	72	85.233	ENSAMXG00000003630	sf1	52	79.369	Astyanax_mexicanus
ENSMEUG00000013424	SF1	97	98.246	ENSBTAG00000001035	SF1	80	98.246	Bos_taurus
ENSMEUG00000013424	SF1	100	98.493	ENSCJAG00000002780	SF1	80	98.246	Callithrix_jacchus
ENSMEUG00000013424	SF1	97	98.246	ENSCAFG00000014239	SF1	80	98.246	Canis_familiaris
ENSMEUG00000013424	SF1	97	98.246	ENSCAFG00020014381	SF1	80	98.246	Canis_lupus_dingo
ENSMEUG00000013424	SF1	100	98.493	ENSCHIG00000025867	SF1	97	98.493	Capra_hircus
ENSMEUG00000013424	SF1	51	99.265	ENSTSYG00000033618	SF1	86	100.000	Carlito_syrichta
ENSMEUG00000013424	SF1	82	97.465	ENSCAPG00000010762	SF1	78	97.465	Cavia_aperea
ENSMEUG00000013424	SF1	100	98.117	ENSCPOG00000012290	SF1	99	98.117	Cavia_porcellus
ENSMEUG00000013424	SF1	100	98.493	ENSCCAG00000037881	SF1	92	98.718	Cebus_capucinus
ENSMEUG00000013424	SF1	96	83.694	ENSCCAG00000023781	-	87	86.517	Cebus_capucinus
ENSMEUG00000013424	SF1	97	98.246	ENSCATG00000011564	SF1	95	97.474	Cercocebus_atys
ENSMEUG00000013424	SF1	100	98.493	ENSCSAG00000007258	SF1	97	98.493	Chlorocebus_sabaeus
ENSMEUG00000013424	SF1	78	92.718	ENSCHOG00000006008	SF1	79	92.823	Choloepus_hoffmanni
ENSMEUG00000013424	SF1	96	88.605	ENSCPBG00000023763	SF1	65	85.658	Chrysemys_picta_bellii
ENSMEUG00000013424	SF1	58	67.203	ENSCING00000005564	-	71	61.732	Ciona_intestinalis
ENSMEUG00000013424	SF1	96	53.682	ENSCSAVG00000009055	-	56	67.077	Ciona_savignyi
ENSMEUG00000013424	SF1	97	98.246	ENSCANG00000042201	SF1	88	98.630	Colobus_angolensis_palliatus
ENSMEUG00000013424	SF1	97	98.051	ENSCGRG00001003677	Sf1	80	98.051	Cricetulus_griseus_chok1gshd
ENSMEUG00000013424	SF1	100	98.305	ENSCGRG00000001708	Sf1	98	98.305	Cricetulus_griseus_crigri
ENSMEUG00000013424	SF1	74	79.146	ENSCSEG00000014375	sf1	56	77.073	Cynoglossus_semilaevis
ENSMEUG00000013424	SF1	68	85.359	ENSCVAG00000001670	sf1	62	77.859	Cyprinodon_variegatus
ENSMEUG00000013424	SF1	72	81.606	ENSDARG00000008188	sf1	68	78.883	Danio_rerio
ENSMEUG00000013424	SF1	100	98.305	ENSDNOG00000001282	SF1	97	98.305	Dasypus_novemcinctus
ENSMEUG00000013424	SF1	97	98.246	ENSDORG00000016334	Sf1	80	98.246	Dipodomys_ordii
ENSMEUG00000013424	SF1	96	89.412	ENSETEG00000012830	SF1	72	86.940	Echinops_telfairi
ENSMEUG00000013424	SF1	100	98.117	ENSEASG00005018272	SF1	97	98.117	Equus_asinus_asinus
ENSMEUG00000013424	SF1	100	98.305	ENSECAG00000024544	SF1	97	98.305	Equus_caballus
ENSMEUG00000013424	SF1	74	98.473	ENSEEUG00000001058	SF1	100	98.473	Erinaceus_europaeus
ENSMEUG00000013424	SF1	100	98.493	ENSFCAG00000012231	SF1	80	98.246	Felis_catus
ENSMEUG00000013424	SF1	96	95.882	ENSFDAG00000009833	SF1	78	97.926	Fukomys_damarensis
ENSMEUG00000013424	SF1	69	82.527	ENSFHEG00000022656	sf1	58	77.831	Fundulus_heteroclitus
ENSMEUG00000013424	SF1	59	88.509	ENSGMOG00000007469	sf1	59	88.509	Gadus_morhua
ENSMEUG00000013424	SF1	68	85.054	ENSGAFG00000019284	sf1	75	80.893	Gambusia_affinis
ENSMEUG00000013424	SF1	70	79.576	ENSGACG00000000826	sf1	65	75.931	Gasterosteus_aculeatus
ENSMEUG00000013424	SF1	85	89.062	ENSGAGG00000021691	SF1	71	85.658	Gopherus_agassizii
ENSMEUG00000013424	SF1	69	83.065	ENSHBUG00000011598	sf1	58	76.905	Haplochromis_burtoni
ENSMEUG00000013424	SF1	97	98.246	ENSHGLG00000009541	SF1	80	98.246	Heterocephalus_glaber_female
ENSMEUG00000013424	SF1	80	89.066	ENSHGLG00100008255	-	90	88.610	Heterocephalus_glaber_male
ENSMEUG00000013424	SF1	82	88.506	ENSHGLG00100008076	-	87	86.343	Heterocephalus_glaber_male
ENSMEUG00000013424	SF1	93	95.354	ENSHGLG00100013879	-	93	95.573	Heterocephalus_glaber_male
ENSMEUG00000013424	SF1	72	80.206	ENSHCOG00000011388	sf1	58	75.476	Hippocampus_comes
ENSMEUG00000013424	SF1	96	88.039	ENSSTOG00000024353	-	76	88.039	Ictidomys_tridecemlineatus
ENSMEUG00000013424	SF1	97	98.246	ENSSTOG00000009790	-	82	98.246	Ictidomys_tridecemlineatus
ENSMEUG00000013424	SF1	97	98.441	ENSJJAG00000011788	Sf1	80	98.441	Jaculus_jaculus
ENSMEUG00000013424	SF1	69	84.267	ENSKMAG00000005854	sf1	60	79.024	Kryptolebias_marmoratus
ENSMEUG00000013424	SF1	69	82.888	ENSLBEG00000019836	sf1	50	87.077	Labrus_bergylta
ENSMEUG00000013424	SF1	69	85.405	ENSLOCG00000002130	sf1	58	80.451	Lepisosteus_oculatus
ENSMEUG00000013424	SF1	97	97.856	ENSLAFG00000007201	SF1	80	97.856	Loxodonta_africana
ENSMEUG00000013424	SF1	97	98.246	ENSMFAG00000033122	SF1	94	97.474	Macaca_fascicularis
ENSMEUG00000013424	SF1	100	98.493	ENSMMUG00000022606	SF1	97	98.493	Macaca_mulatta
ENSMEUG00000013424	SF1	100	97.575	ENSMNEG00000037901	SF1	94	97.474	Macaca_nemestrina
ENSMEUG00000013424	SF1	97	98.246	ENSMLEG00000040706	SF1	94	97.474	Mandrillus_leucophaeus
ENSMEUG00000013424	SF1	68	83.019	ENSMAMG00000001780	sf1	58	76.905	Mastacembelus_armatus
ENSMEUG00000013424	SF1	69	83.333	ENSMZEG00005009196	sf1	58	77.143	Maylandia_zebra
ENSMEUG00000013424	SF1	97	98.051	ENSMAUG00000014064	Sf1	80	98.051	Mesocricetus_auratus
ENSMEUG00000013424	SF1	100	98.493	ENSMICG00000001202	SF1	92	98.465	Microcebus_murinus
ENSMEUG00000013424	SF1	97	97.856	ENSMOCG00000022038	Sf1	80	97.856	Microtus_ochrogaster
ENSMEUG00000013424	SF1	68	82.418	ENSMMOG00000020474	sf1	58	77.171	Mola_mola
ENSMEUG00000013424	SF1	83	95.216	ENSMODG00000029407	SF1	95	95.216	Monodelphis_domestica
ENSMEUG00000013424	SF1	68	83.978	ENSMALG00000020521	sf1	66	78.803	Monopterus_albus
ENSMEUG00000013424	SF1	100	98.305	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMEUG00000013424	SF1	100	98.305	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMEUG00000013424	SF1	100	98.305	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMEUG00000013424	SF1	100	98.305	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMEUG00000013424	SF1	97	98.246	ENSMPUG00000012684	SF1	80	98.246	Mustela_putorius_furo
ENSMEUG00000013424	SF1	83	93.636	ENSMLUG00000029800	-	75	94.050	Myotis_lucifugus
ENSMEUG00000013424	SF1	97	97.856	ENSMLUG00000015217	-	80	97.856	Myotis_lucifugus
ENSMEUG00000013424	SF1	97	98.441	ENSNGAG00000005550	Sf1	80	98.441	Nannospalax_galili
ENSMEUG00000013424	SF1	69	84.973	ENSNBRG00000017606	sf1	60	78.261	Neolamprologus_brichardi
ENSMEUG00000013424	SF1	97	98.246	ENSNLEG00000005236	-	88	98.630	Nomascus_leucogenys
ENSMEUG00000013424	SF1	93	98.182	ENSOPRG00000005008	SF1	100	98.182	Ochotona_princeps
ENSMEUG00000013424	SF1	85	96.444	ENSODEG00000006102	-	78	91.423	Octodon_degus
ENSMEUG00000013424	SF1	69	83.065	ENSONIG00000015728	sf1	58	77.143	Oreochromis_niloticus
ENSMEUG00000013424	SF1	76	86.207	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSMEUG00000013424	SF1	97	98.051	ENSOCUG00000026486	SF1	81	98.051	Oryctolagus_cuniculus
ENSMEUG00000013424	SF1	71	80.729	ENSORLG00000011853	sf1	58	77.073	Oryzias_latipes
ENSMEUG00000013424	SF1	71	80.729	ENSORLG00020011834	sf1	58	77.073	Oryzias_latipes_hni
ENSMEUG00000013424	SF1	69	80.533	ENSORLG00015012855	sf1	58	76.829	Oryzias_latipes_hsok
ENSMEUG00000013424	SF1	69	81.333	ENSOMEG00000005210	sf1	59	75.714	Oryzias_melastigma
ENSMEUG00000013424	SF1	97	98.246	ENSOGAG00000016196	SF1	81	98.246	Otolemur_garnettii
ENSMEUG00000013424	SF1	96	94.030	ENSOARG00000009166	SF1	94	94.030	Ovis_aries
ENSMEUG00000013424	SF1	95	98.413	ENSPPAG00000002799	-	93	98.718	Pan_paniscus
ENSMEUG00000013424	SF1	100	98.493	ENSPPRG00000013566	SF1	82	98.413	Panthera_pardus
ENSMEUG00000013424	SF1	82	97.926	ENSPTIG00000016141	SF1	78	97.926	Panthera_tigris_altaica
ENSMEUG00000013424	SF1	100	98.493	ENSPTRG00000003846	SF1	95	98.778	Pan_troglodytes
ENSMEUG00000013424	SF1	100	98.493	ENSPANG00000020754	SF1	97	98.493	Papio_anubis
ENSMEUG00000013424	SF1	62	79.580	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSMEUG00000013424	SF1	66	87.464	ENSPSIG00000003610	SF1	81	81.928	Pelodiscus_sinensis
ENSMEUG00000013424	SF1	97	98.051	ENSPEMG00000010463	Sf1	80	98.051	Peromyscus_maniculatus_bairdii
ENSMEUG00000013424	SF1	63	72.372	ENSPMAG00000008272	sf1	52	66.940	Petromyzon_marinus
ENSMEUG00000013424	SF1	97	99.023	ENSPCIG00000018173	SF1	81	99.023	Phascolarctos_cinereus
ENSMEUG00000013424	SF1	68	85.912	ENSPFOG00000013683	sf1	65	80.846	Poecilia_formosa
ENSMEUG00000013424	SF1	68	84.367	ENSPLAG00000018076	sf1	60	79.319	Poecilia_latipinna
ENSMEUG00000013424	SF1	68	84.367	ENSPMEG00000005726	sf1	61	79.562	Poecilia_mexicana
ENSMEUG00000013424	SF1	68	83.827	ENSPREG00000004155	sf1	58	78.832	Poecilia_reticulata
ENSMEUG00000013424	SF1	97	98.246	ENSPPYG00000003098	-	96	98.824	Pongo_abelii
ENSMEUG00000013424	SF1	100	97.928	ENSPCAG00000013631	SF1	79	97.928	Procavia_capensis
ENSMEUG00000013424	SF1	97	98.246	ENSPCOG00000027546	SF1	92	98.465	Propithecus_coquereli
ENSMEUG00000013424	SF1	100	98.305	ENSPVAG00000016938	SF1	80	98.305	Pteropus_vampyrus
ENSMEUG00000013424	SF1	69	83.333	ENSPNYG00000004673	sf1	58	77.381	Pundamilia_nyererei
ENSMEUG00000013424	SF1	69	86.253	ENSPNAG00000013072	sf1	59	79.126	Pygocentrus_nattereri
ENSMEUG00000013424	SF1	97	98.051	ENSRNOG00000021085	Sf1	94	98.298	Rattus_norvegicus
ENSMEUG00000013424	SF1	85	98.891	ENSRBIG00000042818	SF1	88	98.630	Rhinopithecus_bieti
ENSMEUG00000013424	SF1	98	98.659	ENSRROG00000045655	SF1	100	98.659	Rhinopithecus_roxellana
ENSMEUG00000013424	SF1	55	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMEUG00000013424	SF1	92	82.922	ENSSBOG00000022267	-	94	84.574	Saimiri_boliviensis_boliviensis
ENSMEUG00000013424	SF1	74	94.416	ENSSHAG00000006841	SF1	72	95.685	Sarcophilus_harrisii
ENSMEUG00000013424	SF1	73	81.378	ENSSFOG00015021978	sf1	57	78.713	Scleropages_formosus
ENSMEUG00000013424	SF1	76	76.794	ENSSMAG00000007549	sf1	62	77.218	Scophthalmus_maximus
ENSMEUG00000013424	SF1	68	81.402	ENSSDUG00000003903	sf1	60	77.805	Seriola_dumerili
ENSMEUG00000013424	SF1	68	81.402	ENSSLDG00000013075	sf1	58	77.805	Seriola_lalandi_dorsalis
ENSMEUG00000013424	SF1	96	94.521	ENSSARG00000008180	SF1	99	94.521	Sorex_araneus
ENSMEUG00000013424	SF1	95	83.462	ENSSPUG00000012907	SF1	86	81.923	Sphenodon_punctatus
ENSMEUG00000013424	SF1	68	81.941	ENSSPAG00000019060	sf1	58	76.429	Stegastes_partitus
ENSMEUG00000013424	SF1	100	98.305	ENSSSCG00000013021	SF1	97	98.305	Sus_scrofa
ENSMEUG00000013424	SF1	97	61.377	ENSTNIG00000004820	sf1	76	69.193	Tetraodon_nigroviridis
ENSMEUG00000013424	SF1	85	91.814	ENSTBEG00000013133	SF1	66	91.778	Tupaia_belangeri
ENSMEUG00000013424	SF1	100	93.032	ENSTTRG00000008857	SF1	99	92.279	Tursiops_truncatus
ENSMEUG00000013424	SF1	78	94.458	ENSUAMG00000011977	SF1	79	94.458	Ursus_americanus
ENSMEUG00000013424	SF1	85	98.891	ENSUMAG00000007268	SF1	86	98.889	Ursus_maritimus
ENSMEUG00000013424	SF1	66	99.587	ENSVPAG00000011912	SF1	64	99.587	Vicugna_pacos
ENSMEUG00000013424	SF1	100	98.493	ENSVVUG00000028585	SF1	97	98.493	Vulpes_vulpes
ENSMEUG00000013424	SF1	86	76.688	ENSXETG00000008434	sf1	67	81.436	Xenopus_tropicalis
ENSMEUG00000013424	SF1	69	85.399	ENSXCOG00000003704	sf1	74	80.846	Xiphophorus_couchianus
ENSMEUG00000013424	SF1	69	83.871	ENSXMAG00000007822	sf1	60	79.562	Xiphophorus_maculatus