EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000014519 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Plus strand
Length: 1654 bases
Position: chrGeneScaffold_1384:18196-19849
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000013256	Exo_endo_phos	PF03372.23	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000014563	APEX1-201	942	-	ENSMEUP00000013256	314 (aa)	-	UPI0001B21603

Gene Model

Click here to download ENSMEUG00000014519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000014519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000014519	APEX1	100	87.107	ENSG00000100823	APEX1	100	87.107	Homo_sapiens
ENSMEUG00000014519	APEX1	89	67.384	ENSAPOG00000017002	apex1	99	63.782	Acanthochromis_polyacanthus
ENSMEUG00000014519	APEX1	100	86.207	ENSAMEG00000005418	APEX1	100	87.421	Ailuropoda_melanoleuca
ENSMEUG00000014519	APEX1	87	70.803	ENSACIG00000010653	apex1	97	68.836	Amphilophus_citrinellus
ENSMEUG00000014519	APEX1	89	67.384	ENSAOCG00000009649	apex1	99	63.898	Amphiprion_ocellaris
ENSMEUG00000014519	APEX1	89	67.384	ENSAPEG00000021453	apex1	99	63.898	Amphiprion_percula
ENSMEUG00000014519	APEX1	87	70.696	ENSATEG00000002883	apex1	97	66.667	Anabas_testudineus
ENSMEUG00000014519	APEX1	100	66.352	ENSACAG00000008099	APEX1	100	67.610	Anolis_carolinensis
ENSMEUG00000014519	APEX1	100	85.580	ENSANAG00000030117	APEX1	100	86.792	Aotus_nancymaae
ENSMEUG00000014519	APEX1	87	69.343	ENSACLG00000018441	apex1	99	65.495	Astatotilapia_calliptera
ENSMEUG00000014519	APEX1	100	65.397	ENSAMXG00000034699	apex1	100	65.397	Astyanax_mexicanus
ENSMEUG00000014519	APEX1	100	84.953	ENSBTAG00000002745	APEX1	100	86.164	Bos_taurus
ENSMEUG00000014519	APEX1	81	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSMEUG00000014519	APEX1	100	85.893	ENSCJAG00000009726	APEX1	100	87.107	Callithrix_jacchus
ENSMEUG00000014519	APEX1	100	85.266	ENSCAFG00000032033	APEX1	100	86.478	Canis_familiaris
ENSMEUG00000014519	APEX1	54	78.613	ENSCAFG00020023002	-	96	80.814	Canis_lupus_dingo
ENSMEUG00000014519	APEX1	100	85.266	ENSCAFG00020014377	-	100	86.478	Canis_lupus_dingo
ENSMEUG00000014519	APEX1	100	84.326	ENSCHIG00000007298	-	100	85.535	Capra_hircus
ENSMEUG00000014519	APEX1	86	76.015	ENSCHIG00000014537	-	95	71.812	Capra_hircus
ENSMEUG00000014519	APEX1	100	86.164	ENSTSYG00000034813	APEX1	100	86.164	Carlito_syrichta
ENSMEUG00000014519	APEX1	86	82.657	ENSCAPG00000016235	APEX1	91	91.102	Cavia_aperea
ENSMEUG00000014519	APEX1	100	85.849	ENSCPOG00000030909	APEX1	100	85.849	Cavia_porcellus
ENSMEUG00000014519	APEX1	100	85.893	ENSCCAG00000033056	-	100	87.107	Cebus_capucinus
ENSMEUG00000014519	APEX1	100	73.668	ENSCCAG00000031931	-	100	74.843	Cebus_capucinus
ENSMEUG00000014519	APEX1	100	86.792	ENSCATG00000015580	APEX1	100	86.792	Cercocebus_atys
ENSMEUG00000014519	APEX1	100	85.849	ENSCLAG00000001002	APEX1	100	85.849	Chinchilla_lanigera
ENSMEUG00000014519	APEX1	100	86.478	ENSCSAG00000016685	-	100	86.478	Chlorocebus_sabaeus
ENSMEUG00000014519	APEX1	100	86.478	ENSCSAG00000016670	-	100	86.478	Chlorocebus_sabaeus
ENSMEUG00000014519	APEX1	100	68.966	ENSCPBG00000009567	APEX1	100	68.966	Chrysemys_picta_bellii
ENSMEUG00000014519	APEX1	92	57.288	ENSCING00000008137	-	94	57.288	Ciona_intestinalis
ENSMEUG00000014519	APEX1	100	49.363	ENSCSAVG00000007144	-	100	54.054	Ciona_savignyi
ENSMEUG00000014519	APEX1	100	87.107	ENSCANG00000030726	APEX1	100	87.107	Colobus_angolensis_palliatus
ENSMEUG00000014519	APEX1	100	83.596	ENSCGRG00001017046	Apex1	100	83.596	Cricetulus_griseus_chok1gshd
ENSMEUG00000014519	APEX1	100	83.596	ENSCGRG00000008984	Apex1	100	83.596	Cricetulus_griseus_crigri
ENSMEUG00000014519	APEX1	99	63.578	ENSCSEG00000017499	apex1	99	63.578	Cynoglossus_semilaevis
ENSMEUG00000014519	APEX1	89	69.534	ENSCVAG00000022075	apex1	99	65.924	Cyprinodon_variegatus
ENSMEUG00000014519	APEX1	100	64.650	ENSDARG00000045843	apex1	100	65.287	Danio_rerio
ENSMEUG00000014519	APEX1	100	81.191	ENSDNOG00000042234	APEX1	95	82.390	Dasypus_novemcinctus
ENSMEUG00000014519	APEX1	100	86.478	ENSDORG00000001616	Apex1	100	86.478	Dipodomys_ordii
ENSMEUG00000014519	APEX1	100	86.207	ENSETEG00000004855	-	100	87.421	Echinops_telfairi
ENSMEUG00000014519	APEX1	76	63.180	ENSEBUG00000000622	-	92	63.180	Eptatretus_burgeri
ENSMEUG00000014519	APEX1	100	87.421	ENSEASG00005017489	APEX1	74	87.421	Equus_asinus_asinus
ENSMEUG00000014519	APEX1	100	87.421	ENSECAG00000022325	APEX1	82	87.421	Equus_caballus
ENSMEUG00000014519	APEX1	88	88.000	ENSEEUG00000012569	APEX1	100	86.458	Erinaceus_europaeus
ENSMEUG00000014519	APEX1	100	63.376	ENSELUG00000021706	apex1	100	64.669	Esox_lucius
ENSMEUG00000014519	APEX1	100	86.792	ENSFCAG00000030869	APEX1	100	86.792	Felis_catus
ENSMEUG00000014519	APEX1	100	85.535	ENSFDAG00000006120	APEX1	100	85.535	Fukomys_damarensis
ENSMEUG00000014519	APEX1	89	69.534	ENSFHEG00000009031	apex1	83	65.924	Fundulus_heteroclitus
ENSMEUG00000014519	APEX1	99	62.420	ENSGMOG00000007943	apex1	99	62.420	Gadus_morhua
ENSMEUG00000014519	APEX1	89	69.534	ENSGAFG00000005311	apex1	93	68.276	Gambusia_affinis
ENSMEUG00000014519	APEX1	99	65.176	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSMEUG00000014519	APEX1	100	68.339	ENSGAGG00000014999	APEX1	100	68.339	Gopherus_agassizii
ENSMEUG00000014519	APEX1	100	85.580	ENSGGOG00000002128	APEX1	100	86.792	Gorilla_gorilla
ENSMEUG00000014519	APEX1	92	64.078	ENSHBUG00000005894	apex1	99	65.385	Haplochromis_burtoni
ENSMEUG00000014519	APEX1	100	86.478	ENSHGLG00000002848	APEX1	100	86.478	Heterocephalus_glaber_female
ENSMEUG00000014519	APEX1	100	86.478	ENSHGLG00100017878	APEX1	100	86.478	Heterocephalus_glaber_male
ENSMEUG00000014519	APEX1	99	65.176	ENSHCOG00000009961	apex1	99	65.176	Hippocampus_comes
ENSMEUG00000014519	APEX1	100	66.456	ENSIPUG00000005799	apex1	100	66.456	Ictalurus_punctatus
ENSMEUG00000014519	APEX1	100	84.013	ENSSTOG00000010096	APEX1	100	85.535	Ictidomys_tridecemlineatus
ENSMEUG00000014519	APEX1	100	85.535	ENSJJAG00000012067	-	100	85.535	Jaculus_jaculus
ENSMEUG00000014519	APEX1	91	79.649	ENSJJAG00000020465	-	96	78.859	Jaculus_jaculus
ENSMEUG00000014519	APEX1	100	75.549	ENSJJAG00000003660	-	100	77.044	Jaculus_jaculus
ENSMEUG00000014519	APEX1	89	68.817	ENSKMAG00000021171	apex1	99	65.605	Kryptolebias_marmoratus
ENSMEUG00000014519	APEX1	89	67.025	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSMEUG00000014519	APEX1	100	66.771	ENSLACG00000008617	APEX1	100	66.771	Latimeria_chalumnae
ENSMEUG00000014519	APEX1	100	66.771	ENSLOCG00000015516	apex1	99	66.771	Lepisosteus_oculatus
ENSMEUG00000014519	APEX1	100	84.591	ENSLAFG00000021872	APEX1	100	85.535	Loxodonta_africana
ENSMEUG00000014519	APEX1	100	86.792	ENSMFAG00000002565	APEX1	100	86.792	Macaca_fascicularis
ENSMEUG00000014519	APEX1	100	86.792	ENSMMUG00000048039	APEX1	100	86.792	Macaca_mulatta
ENSMEUG00000014519	APEX1	100	86.792	ENSMNEG00000036944	APEX1	100	86.792	Macaca_nemestrina
ENSMEUG00000014519	APEX1	100	86.792	ENSMLEG00000042125	APEX1	100	86.792	Mandrillus_leucophaeus
ENSMEUG00000014519	APEX1	99	66.134	ENSMAMG00000023526	apex1	99	66.134	Mastacembelus_armatus
ENSMEUG00000014519	APEX1	87	69.343	ENSMZEG00005014187	apex1	99	65.495	Maylandia_zebra
ENSMEUG00000014519	APEX1	100	84.810	ENSMAUG00000013994	Apex1	100	84.810	Mesocricetus_auratus
ENSMEUG00000014519	APEX1	100	86.478	ENSMICG00000043554	APEX1	100	86.478	Microcebus_murinus
ENSMEUG00000014519	APEX1	100	84.543	ENSMOCG00000013721	Apex1	100	84.543	Microtus_ochrogaster
ENSMEUG00000014519	APEX1	99	63.376	ENSMMOG00000010031	apex1	97	63.376	Mola_mola
ENSMEUG00000014519	APEX1	100	86.250	ENSMODG00000007125	APEX1	100	90.000	Monodelphis_domestica
ENSMEUG00000014519	APEX1	89	63.082	ENSMALG00000011699	apex1	77	62.329	Monopterus_albus
ENSMEUG00000014519	APEX1	99	85.127	MGP_CAROLIEiJ_G0019209	Apex1	99	85.127	Mus_caroli
ENSMEUG00000014519	APEX1	100	85.804	ENSMUSG00000035960	Apex1	100	85.804	Mus_musculus
ENSMEUG00000014519	APEX1	100	84.013	MGP_PahariEiJ_G0030232	Apex1	100	86.120	Mus_pahari
ENSMEUG00000014519	APEX1	100	85.804	MGP_SPRETEiJ_G0020101	Apex1	100	85.804	Mus_spretus
ENSMEUG00000014519	APEX1	100	85.938	ENSMLUG00000028957	APEX1	100	85.938	Myotis_lucifugus
ENSMEUG00000014519	APEX1	97	66.558	ENSNGAG00000021748	-	95	66.558	Nannospalax_galili
ENSMEUG00000014519	APEX1	100	86.164	ENSNGAG00000002725	-	100	86.164	Nannospalax_galili
ENSMEUG00000014519	APEX1	87	69.343	ENSNBRG00000005334	apex1	91	65.495	Neolamprologus_brichardi
ENSMEUG00000014519	APEX1	100	86.120	ENSNLEG00000010839	APEX1	100	86.478	Nomascus_leucogenys
ENSMEUG00000014519	APEX1	100	85.804	ENSOPRG00000014029	APEX1	100	85.804	Ochotona_princeps
ENSMEUG00000014519	APEX1	100	86.478	ENSODEG00000001703	-	100	86.478	Octodon_degus
ENSMEUG00000014519	APEX1	97	69.579	ENSODEG00000004777	-	99	69.579	Octodon_degus
ENSMEUG00000014519	APEX1	100	66.667	ENSODEG00000006583	-	100	66.667	Octodon_degus
ENSMEUG00000014519	APEX1	89	69.065	ENSONIG00000012089	apex1	99	66.134	Oreochromis_niloticus
ENSMEUG00000014519	APEX1	91	82.105	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSMEUG00000014519	APEX1	100	85.266	ENSOCUG00000005022	APEX1	100	86.478	Oryctolagus_cuniculus
ENSMEUG00000014519	APEX1	99	65.924	ENSORLG00000012378	apex1	99	66.561	Oryzias_latipes
ENSMEUG00000014519	APEX1	99	65.924	ENSORLG00020021371	apex1	99	66.561	Oryzias_latipes_hni
ENSMEUG00000014519	APEX1	99	65.924	ENSORLG00015020089	apex1	99	66.561	Oryzias_latipes_hsok
ENSMEUG00000014519	APEX1	99	65.924	ENSOMEG00000018876	apex1	99	65.924	Oryzias_melastigma
ENSMEUG00000014519	APEX1	95	78.738	ENSOGAG00000029355	-	96	79.070	Otolemur_garnettii
ENSMEUG00000014519	APEX1	100	87.736	ENSOGAG00000013335	-	100	87.736	Otolemur_garnettii
ENSMEUG00000014519	APEX1	97	81.553	ENSOARG00000001876	-	100	82.792	Ovis_aries
ENSMEUG00000014519	APEX1	100	84.013	ENSOARG00000019740	-	100	85.220	Ovis_aries
ENSMEUG00000014519	APEX1	95	76.174	ENSOARG00000014424	-	95	76.174	Ovis_aries
ENSMEUG00000014519	APEX1	100	87.421	ENSPPAG00000038760	APEX1	100	87.421	Pan_paniscus
ENSMEUG00000014519	APEX1	100	85.266	ENSPPRG00000011794	APEX1	100	86.478	Panthera_pardus
ENSMEUG00000014519	APEX1	100	86.792	ENSPTIG00000014829	APEX1	100	86.792	Panthera_tigris_altaica
ENSMEUG00000014519	APEX1	100	87.421	ENSPTRG00000006093	APEX1	100	87.421	Pan_troglodytes
ENSMEUG00000014519	APEX1	100	86.792	ENSPANG00000022757	APEX1	100	86.792	Papio_anubis
ENSMEUG00000014519	APEX1	87	69.708	ENSPKIG00000003504	apex1	100	65.615	Paramormyrops_kingsleyae
ENSMEUG00000014519	APEX1	77	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSMEUG00000014519	APEX1	100	85.174	ENSPEMG00000019097	Apex1	100	85.174	Peromyscus_maniculatus_bairdii
ENSMEUG00000014519	APEX1	94	66.667	ENSPMAG00000007275	-	99	66.667	Petromyzon_marinus
ENSMEUG00000014519	APEX1	100	89.969	ENSPCIG00000023274	APEX1	100	92.790	Phascolarctos_cinereus
ENSMEUG00000014519	APEX1	89	69.892	ENSPFOG00000004178	apex1	99	65.815	Poecilia_formosa
ENSMEUG00000014519	APEX1	89	69.534	ENSPLAG00000012779	apex1	99	65.924	Poecilia_latipinna
ENSMEUG00000014519	APEX1	89	69.892	ENSPMEG00000019623	apex1	99	65.815	Poecilia_mexicana
ENSMEUG00000014519	APEX1	89	69.176	ENSPREG00000014298	apex1	99	65.176	Poecilia_reticulata
ENSMEUG00000014519	APEX1	100	85.266	ENSPPYG00000005565	APEX1	100	86.478	Pongo_abelii
ENSMEUG00000014519	APEX1	100	83.962	ENSPCAG00000010376	APEX1	100	83.962	Procavia_capensis
ENSMEUG00000014519	APEX1	100	86.478	ENSPCOG00000021564	APEX1	100	86.478	Propithecus_coquereli
ENSMEUG00000014519	APEX1	100	86.250	ENSPVAG00000010736	APEX1	100	86.250	Pteropus_vampyrus
ENSMEUG00000014519	APEX1	87	69.708	ENSPNYG00000023940	apex1	99	65.815	Pundamilia_nyererei
ENSMEUG00000014519	APEX1	93	63.481	ENSPNAG00000020897	apex1	96	63.356	Pygocentrus_nattereri
ENSMEUG00000014519	APEX1	100	84.543	ENSRNOG00000009663	Apex1	100	84.543	Rattus_norvegicus
ENSMEUG00000014519	APEX1	100	87.107	ENSRBIG00000038325	APEX1	99	87.107	Rhinopithecus_bieti
ENSMEUG00000014519	APEX1	100	77.389	ENSSBOG00000031372	-	100	77.389	Saimiri_boliviensis_boliviensis
ENSMEUG00000014519	APEX1	100	85.580	ENSSBOG00000018921	-	100	86.792	Saimiri_boliviensis_boliviensis
ENSMEUG00000014519	APEX1	100	88.272	ENSSHAG00000013524	APEX1	100	90.741	Sarcophilus_harrisii
ENSMEUG00000014519	APEX1	100	62.739	ENSSFOG00015001948	apex1	100	62.739	Scleropages_formosus
ENSMEUG00000014519	APEX1	87	68.978	ENSSMAG00000013348	apex1	99	64.577	Scophthalmus_maximus
ENSMEUG00000014519	APEX1	99	64.856	ENSSDUG00000016377	apex1	99	65.287	Seriola_dumerili
ENSMEUG00000014519	APEX1	99	65.176	ENSSLDG00000023005	apex1	99	65.605	Seriola_lalandi_dorsalis
ENSMEUG00000014519	APEX1	94	69.048	ENSSPUG00000000531	APEX1	99	69.048	Sphenodon_punctatus
ENSMEUG00000014519	APEX1	89	68.100	ENSSPAG00000000458	apex1	99	63.782	Stegastes_partitus
ENSMEUG00000014519	APEX1	100	84.953	ENSSSCG00000040060	-	100	86.478	Sus_scrofa
ENSMEUG00000014519	APEX1	96	53.074	ENSSSCG00000039705	-	99	53.135	Sus_scrofa
ENSMEUG00000014519	APEX1	75	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSMEUG00000014519	APEX1	87	66.788	ENSTRUG00000004268	apex1	95	62.579	Takifugu_rubripes
ENSMEUG00000014519	APEX1	99	63.141	ENSTNIG00000005778	apex1	99	63.141	Tetraodon_nigroviridis
ENSMEUG00000014519	APEX1	100	81.818	ENSTBEG00000006405	APEX1	100	83.333	Tupaia_belangeri
ENSMEUG00000014519	APEX1	75	90.254	ENSTTRG00000007860	APEX1	100	90.254	Tursiops_truncatus
ENSMEUG00000014519	APEX1	100	86.478	ENSUAMG00000010457	APEX1	100	86.478	Ursus_americanus
ENSMEUG00000014519	APEX1	100	86.478	ENSUMAG00000009178	APEX1	100	86.478	Ursus_maritimus
ENSMEUG00000014519	APEX1	75	84.746	ENSVPAG00000005083	APEX1	100	84.746	Vicugna_pacos
ENSMEUG00000014519	APEX1	100	85.266	ENSVVUG00000009010	APEX1	100	86.478	Vulpes_vulpes
ENSMEUG00000014519	APEX1	100	64.669	ENSXETG00000024773	apex1	100	66.562	Xenopus_tropicalis
ENSMEUG00000014519	APEX1	89	69.534	ENSXCOG00000015233	apex1	99	65.495	Xiphophorus_couchianus
ENSMEUG00000014519	APEX1	100	65.605	ENSXMAG00000006195	apex1	99	65.495	Xiphophorus_maculatus