EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000014922 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 16954 bases
Position: chrGeneScaffold_8133:33703-50656
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000013639	CPSF_A	PF03178.15	2.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000014988	CPSF1-201	4194	-	ENSMEUP00000013639	1397 (aa)	-	UPI0001B2143D

Gene Model

Click here to download ENSMEUG00000014922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000014922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000014922	CPSF1	85	96.512	ENSG00000071894	CPSF1	84	96.512	Homo_sapiens
ENSMEUG00000014922	CPSF1	85	87.791	ENSAPOG00000019621	cpsf1	85	87.791	Acanthochromis_polyacanthus
ENSMEUG00000014922	CPSF1	85	90.000	ENSAMEG00000005557	CPSF1	85	89.020	Ailuropoda_melanoleuca
ENSMEUG00000014922	CPSF1	83	86.628	ENSACIG00000006112	cpsf1	81	86.628	Amphilophus_citrinellus
ENSMEUG00000014922	CPSF1	85	87.791	ENSAOCG00000007120	cpsf1	82	87.791	Amphiprion_ocellaris
ENSMEUG00000014922	CPSF1	85	87.791	ENSAPEG00000005755	cpsf1	82	87.791	Amphiprion_percula
ENSMEUG00000014922	CPSF1	84	87.209	ENSATEG00000011097	cpsf1	85	87.209	Anabas_testudineus
ENSMEUG00000014922	CPSF1	78	91.045	ENSACAG00000009655	CPSF1	81	91.045	Anolis_carolinensis
ENSMEUG00000014922	CPSF1	85	96.512	ENSANAG00000036514	CPSF1	82	96.512	Aotus_nancymaae
ENSMEUG00000014922	CPSF1	84	86.047	ENSACLG00000012231	cpsf1	84	86.047	Astatotilapia_calliptera
ENSMEUG00000014922	CPSF1	84	86.047	ENSAMXG00000008485	cpsf1	82	86.047	Astyanax_mexicanus
ENSMEUG00000014922	CPSF1	85	89.902	ENSBTAG00000008355	CPSF1	85	89.788	Bos_taurus
ENSMEUG00000014922	CPSF1	84	35.393	WBGene00022301	cpsf-1	98	36.364	Caenorhabditis_elegans
ENSMEUG00000014922	CPSF1	85	95.930	ENSCJAG00000021421	CPSF1	82	95.930	Callithrix_jacchus
ENSMEUG00000014922	CPSF1	85	98.837	ENSCAFG00000001600	CPSF1	85	98.837	Canis_familiaris
ENSMEUG00000014922	CPSF1	85	98.837	ENSCAFG00020020821	CPSF1	82	98.837	Canis_lupus_dingo
ENSMEUG00000014922	CPSF1	83	90.111	ENSCHIG00000015833	CPSF1	79	89.969	Capra_hircus
ENSMEUG00000014922	CPSF1	85	97.674	ENSTSYG00000028560	CPSF1	85	97.674	Carlito_syrichta
ENSMEUG00000014922	CPSF1	85	98.256	ENSCAPG00000014921	CPSF1	84	98.256	Cavia_aperea
ENSMEUG00000014922	CPSF1	85	98.256	ENSCPOG00000011448	CPSF1	82	98.256	Cavia_porcellus
ENSMEUG00000014922	CPSF1	85	96.512	ENSCCAG00000037658	CPSF1	84	96.512	Cebus_capucinus
ENSMEUG00000014922	CPSF1	85	96.512	ENSCATG00000037234	CPSF1	84	96.512	Cercocebus_atys
ENSMEUG00000014922	CPSF1	85	98.256	ENSCLAG00000012166	CPSF1	82	98.256	Chinchilla_lanigera
ENSMEUG00000014922	CPSF1	85	96.512	ENSCSAG00000008502	CPSF1	82	96.512	Chlorocebus_sabaeus
ENSMEUG00000014922	CPSF1	84	90.506	ENSCPBG00000018910	CPSF1	79	90.506	Chrysemys_picta_bellii
ENSMEUG00000014922	CPSF1	81	48.649	ENSCING00000000514	-	81	48.649	Ciona_intestinalis
ENSMEUG00000014922	CPSF1	84	47.368	ENSCSAVG00000002293	-	84	47.429	Ciona_savignyi
ENSMEUG00000014922	CPSF1	85	96.512	ENSCANG00000032760	CPSF1	84	96.512	Colobus_angolensis_palliatus
ENSMEUG00000014922	CPSF1	85	97.674	ENSCGRG00001016344	Cpsf1	82	97.674	Cricetulus_griseus_chok1gshd
ENSMEUG00000014922	CPSF1	85	97.674	ENSCGRG00000003118	Cpsf1	82	97.674	Cricetulus_griseus_crigri
ENSMEUG00000014922	CPSF1	84	83.140	ENSCSEG00000013464	cpsf1	84	83.140	Cynoglossus_semilaevis
ENSMEUG00000014922	CPSF1	73	81.395	ENSCVAG00000014059	cpsf1	85	81.395	Cyprinodon_variegatus
ENSMEUG00000014922	CPSF1	84	86.047	ENSDARG00000034178	cpsf1	82	86.047	Danio_rerio
ENSMEUG00000014922	CPSF1	85	96.512	ENSDORG00000006278	Cpsf1	84	96.512	Dipodomys_ordii
ENSMEUG00000014922	CPSF1	84	45.930	FBgn0024698	Cpsf160	81	45.930	Drosophila_melanogaster
ENSMEUG00000014922	CPSF1	78	97.619	ENSETEG00000006022	CPSF1	78	97.619	Echinops_telfairi
ENSMEUG00000014922	CPSF1	85	98.837	ENSEASG00005010774	CPSF1	82	98.837	Equus_asinus_asinus
ENSMEUG00000014922	CPSF1	85	98.837	ENSECAG00000022209	CPSF1	82	98.837	Equus_caballus
ENSMEUG00000014922	CPSF1	84	96.512	ENSEEUG00000000471	CPSF1	82	96.512	Erinaceus_europaeus
ENSMEUG00000014922	CPSF1	85	87.791	ENSELUG00000012271	cpsf1	85	87.791	Esox_lucius
ENSMEUG00000014922	CPSF1	85	98.256	ENSFDAG00000016060	CPSF1	82	98.256	Fukomys_damarensis
ENSMEUG00000014922	CPSF1	85	81.395	ENSFHEG00000016801	cpsf1	82	81.395	Fundulus_heteroclitus
ENSMEUG00000014922	CPSF1	85	86.047	ENSGMOG00000000796	cpsf1	82	86.047	Gadus_morhua
ENSMEUG00000014922	CPSF1	76	85.714	ENSGAFG00000018890	cpsf1	78	85.714	Gambusia_affinis
ENSMEUG00000014922	CPSF1	85	85.465	ENSGACG00000008703	cpsf1	82	85.465	Gasterosteus_aculeatus
ENSMEUG00000014922	CPSF1	83	86.667	ENSGAGG00000004276	CPSF1	83	86.373	Gopherus_agassizii
ENSMEUG00000014922	CPSF1	85	96.512	ENSGGOG00000016185	CPSF1	84	96.512	Gorilla_gorilla
ENSMEUG00000014922	CPSF1	85	86.047	ENSHBUG00000018900	cpsf1	82	86.047	Haplochromis_burtoni
ENSMEUG00000014922	CPSF1	85	98.256	ENSHGLG00000016139	CPSF1	82	98.256	Heterocephalus_glaber_female
ENSMEUG00000014922	CPSF1	85	98.256	ENSHGLG00100009750	CPSF1	82	98.256	Heterocephalus_glaber_male
ENSMEUG00000014922	CPSF1	85	84.884	ENSHCOG00000018509	cpsf1	82	84.884	Hippocampus_comes
ENSMEUG00000014922	CPSF1	84	86.047	ENSIPUG00000011259	cpsf1	82	86.047	Ictalurus_punctatus
ENSMEUG00000014922	CPSF1	85	98.256	ENSSTOG00000009957	CPSF1	84	98.256	Ictidomys_tridecemlineatus
ENSMEUG00000014922	CPSF1	85	96.512	ENSJJAG00000023002	Cpsf1	82	96.512	Jaculus_jaculus
ENSMEUG00000014922	CPSF1	80	82.558	ENSKMAG00000001940	cpsf1	84	82.558	Kryptolebias_marmoratus
ENSMEUG00000014922	CPSF1	85	85.465	ENSLBEG00000003601	cpsf1	82	85.465	Labrus_bergylta
ENSMEUG00000014922	CPSF1	68	89.535	ENSLACG00000000233	CPSF1	72	89.535	Latimeria_chalumnae
ENSMEUG00000014922	CPSF1	85	89.080	ENSLOCG00000008484	cpsf1	82	89.080	Lepisosteus_oculatus
ENSMEUG00000014922	CPSF1	85	97.093	ENSLAFG00000022601	CPSF1	85	97.093	Loxodonta_africana
ENSMEUG00000014922	CPSF1	85	96.512	ENSMFAG00000037013	CPSF1	84	96.512	Macaca_fascicularis
ENSMEUG00000014922	CPSF1	85	96.512	ENSMMUG00000007380	CPSF1	85	96.512	Macaca_mulatta
ENSMEUG00000014922	CPSF1	85	96.512	ENSMNEG00000043564	CPSF1	85	96.512	Macaca_nemestrina
ENSMEUG00000014922	CPSF1	85	96.512	ENSMLEG00000043010	CPSF1	84	96.512	Mandrillus_leucophaeus
ENSMEUG00000014922	CPSF1	84	87.209	ENSMAMG00000003803	cpsf1	85	87.209	Mastacembelus_armatus
ENSMEUG00000014922	CPSF1	84	86.047	ENSMZEG00005001168	cpsf1	82	86.047	Maylandia_zebra
ENSMEUG00000014922	CPSF1	85	98.256	ENSMAUG00000003601	Cpsf1	82	98.256	Mesocricetus_auratus
ENSMEUG00000014922	CPSF1	85	97.674	ENSMICG00000015767	CPSF1	82	97.674	Microcebus_murinus
ENSMEUG00000014922	CPSF1	85	97.674	ENSMOCG00000022758	Cpsf1	82	97.674	Microtus_ochrogaster
ENSMEUG00000014922	CPSF1	85	84.884	ENSMMOG00000021245	cpsf1	81	84.884	Mola_mola
ENSMEUG00000014922	CPSF1	85	100.000	ENSMODG00000010755	CPSF1	82	100.000	Monodelphis_domestica
ENSMEUG00000014922	CPSF1	85	86.047	ENSMALG00000020545	cpsf1	83	86.047	Monopterus_albus
ENSMEUG00000014922	CPSF1	85	98.256	MGP_CAROLIEiJ_G0019936	Cpsf1	82	98.256	Mus_caroli
ENSMEUG00000014922	CPSF1	85	98.256	ENSMUSG00000034022	Cpsf1	82	98.256	Mus_musculus
ENSMEUG00000014922	CPSF1	85	98.256	MGP_PahariEiJ_G0019946	Cpsf1	82	98.256	Mus_pahari
ENSMEUG00000014922	CPSF1	85	98.256	MGP_SPRETEiJ_G0020839	Cpsf1	82	98.256	Mus_spretus
ENSMEUG00000014922	CPSF1	82	96.835	ENSMPUG00000006419	CPSF1	79	96.835	Mustela_putorius_furo
ENSMEUG00000014922	CPSF1	85	97.674	ENSNGAG00000022460	Cpsf1	82	97.674	Nannospalax_galili
ENSMEUG00000014922	CPSF1	84	86.047	ENSNBRG00000000813	cpsf1	80	86.047	Neolamprologus_brichardi
ENSMEUG00000014922	CPSF1	82	76.278	ENSNLEG00000010633	-	84	96.512	Nomascus_leucogenys
ENSMEUG00000014922	CPSF1	53	93.103	ENSOPRG00000004693	-	60	93.103	Ochotona_princeps
ENSMEUG00000014922	CPSF1	85	98.256	ENSODEG00000013995	CPSF1	82	98.256	Octodon_degus
ENSMEUG00000014922	CPSF1	85	85.465	ENSONIG00000007676	cpsf1	82	85.465	Oreochromis_niloticus
ENSMEUG00000014922	CPSF1	54	98.361	ENSOANG00000010716	CPSF1	79	98.361	Ornithorhynchus_anatinus
ENSMEUG00000014922	CPSF1	84	84.302	ENSORLG00000013544	cpsf1	82	84.302	Oryzias_latipes
ENSMEUG00000014922	CPSF1	84	84.302	ENSORLG00020021693	cpsf1	82	84.302	Oryzias_latipes_hni
ENSMEUG00000014922	CPSF1	84	84.302	ENSORLG00015009979	cpsf1	82	84.302	Oryzias_latipes_hsok
ENSMEUG00000014922	CPSF1	84	83.721	ENSOMEG00000011849	cpsf1	82	83.721	Oryzias_melastigma
ENSMEUG00000014922	CPSF1	85	97.674	ENSOGAG00000000315	CPSF1	82	97.674	Otolemur_garnettii
ENSMEUG00000014922	CPSF1	85	96.512	ENSPPAG00000019280	CPSF1	85	96.512	Pan_paniscus
ENSMEUG00000014922	CPSF1	85	96.512	ENSPTRG00000051253	-	84	96.512	Pan_troglodytes
ENSMEUG00000014922	CPSF1	85	96.512	ENSPTRG00000049288	-	84	96.512	Pan_troglodytes
ENSMEUG00000014922	CPSF1	85	96.512	ENSPANG00000015005	CPSF1	85	96.512	Papio_anubis
ENSMEUG00000014922	CPSF1	84	88.372	ENSPKIG00000002582	cpsf1	84	88.372	Paramormyrops_kingsleyae
ENSMEUG00000014922	CPSF1	85	100.000	ENSPCIG00000009035	CPSF1	82	100.000	Phascolarctos_cinereus
ENSMEUG00000014922	CPSF1	85	82.558	ENSPFOG00000012870	cpsf1	83	82.558	Poecilia_formosa
ENSMEUG00000014922	CPSF1	85	81.977	ENSPREG00000016307	cpsf1	83	81.977	Poecilia_reticulata
ENSMEUG00000014922	CPSF1	85	93.605	ENSPPYG00000018973	CPSF1	81	93.605	Pongo_abelii
ENSMEUG00000014922	CPSF1	81	91.279	ENSPCAG00000011541	CPSF1	81	91.279	Procavia_capensis
ENSMEUG00000014922	CPSF1	84	89.020	ENSPCOG00000020001	CPSF1	85	97.674	Propithecus_coquereli
ENSMEUG00000014922	CPSF1	77	98.773	ENSPVAG00000006761	CPSF1	75	98.773	Pteropus_vampyrus
ENSMEUG00000014922	CPSF1	85	86.047	ENSPNYG00000004906	cpsf1	84	86.047	Pundamilia_nyererei
ENSMEUG00000014922	CPSF1	84	73.793	ENSPNAG00000024395	cpsf1	81	73.498	Pygocentrus_nattereri
ENSMEUG00000014922	CPSF1	85	97.674	ENSRNOG00000030705	Cpsf1	85	97.674	Rattus_norvegicus
ENSMEUG00000014922	CPSF1	85	96.512	ENSRBIG00000044907	CPSF1	85	96.512	Rhinopithecus_bieti
ENSMEUG00000014922	CPSF1	85	96.512	ENSRROG00000044861	CPSF1	85	96.512	Rhinopithecus_roxellana
ENSMEUG00000014922	CPSF1	85	96.512	ENSSBOG00000027177	CPSF1	85	96.512	Saimiri_boliviensis_boliviensis
ENSMEUG00000014922	CPSF1	85	99.419	ENSSHAG00000006500	CPSF1	82	99.419	Sarcophilus_harrisii
ENSMEUG00000014922	CPSF1	84	88.953	ENSSFOG00015004606	cpsf1	85	88.953	Scleropages_formosus
ENSMEUG00000014922	CPSF1	85	87.791	ENSSMAG00000020547	cpsf1	83	87.791	Scophthalmus_maximus
ENSMEUG00000014922	CPSF1	84	87.209	ENSSDUG00000001100	cpsf1	82	87.209	Seriola_dumerili
ENSMEUG00000014922	CPSF1	84	87.209	ENSSLDG00000003619	cpsf1	82	87.209	Seriola_lalandi_dorsalis
ENSMEUG00000014922	CPSF1	74	98.413	ENSSARG00000003643	CPSF1	73	98.413	Sorex_araneus
ENSMEUG00000014922	CPSF1	84	93.023	ENSSPUG00000014396	CPSF1	85	93.023	Sphenodon_punctatus
ENSMEUG00000014922	CPSF1	85	87.209	ENSSPAG00000005349	cpsf1	83	87.209	Stegastes_partitus
ENSMEUG00000014922	CPSF1	85	97.093	ENSSSCG00000005906	CPSF1	82	97.093	Sus_scrofa
ENSMEUG00000014922	CPSF1	84	83.721	ENSTRUG00000013134	cpsf1	85	83.721	Takifugu_rubripes
ENSMEUG00000014922	CPSF1	85	83.721	ENSTNIG00000014027	cpsf1	82	83.721	Tetraodon_nigroviridis
ENSMEUG00000014922	CPSF1	62	98.551	ENSTBEG00000001756	CPSF1	72	98.551	Tupaia_belangeri
ENSMEUG00000014922	CPSF1	74	98.256	ENSTTRG00000001937	CPSF1	72	98.256	Tursiops_truncatus
ENSMEUG00000014922	CPSF1	85	98.837	ENSUAMG00000006476	CPSF1	83	98.837	Ursus_americanus
ENSMEUG00000014922	CPSF1	84	81.977	ENSXCOG00000003608	cpsf1	81	81.977	Xiphophorus_couchianus
ENSMEUG00000014922	CPSF1	84	82.558	ENSXMAG00000005798	cpsf1	81	82.558	Xiphophorus_maculatus