EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000015788 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 111441 bases
Position: chrGeneScaffold_6762:26340-137780
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000014438	ResIII	PF04851.15	1e-10	1	1
ENSMEUP00000014438	DEAD	PF00270.29	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000015855	HFM1-201	4332	-	ENSMEUP00000014438	1443 (aa)	-	UPI0001B22722

Gene Model

Click here to download ENSMEUG00000015788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000015788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000015788	HFM1	84	66.954	ENSG00000162669	HFM1	73	86.087	Homo_sapiens
ENSMEUG00000015788	HFM1	53	66.887	ENSAPOG00000005304	hfm1	86	66.887	Acanthochromis_polyacanthus
ENSMEUG00000015788	HFM1	84	67.816	ENSAMEG00000000432	HFM1	84	67.816	Ailuropoda_melanoleuca
ENSMEUG00000015788	HFM1	65	58.714	ENSACIG00000021553	hfm1	84	58.714	Amphilophus_citrinellus
ENSMEUG00000015788	HFM1	52	67.532	ENSAOCG00000022839	hfm1	86	66.667	Amphiprion_ocellaris
ENSMEUG00000015788	HFM1	52	66.887	ENSAPEG00000014316	hfm1	86	65.957	Amphiprion_percula
ENSMEUG00000015788	HFM1	61	59.459	ENSATEG00000019181	hfm1	73	58.071	Anabas_testudineus
ENSMEUG00000015788	HFM1	77	64.154	ENSAPLG00000013639	HFM1	77	64.154	Anas_platyrhynchos
ENSMEUG00000015788	HFM1	84	62.931	ENSANAG00000029513	HFM1	84	62.931	Aotus_nancymaae
ENSMEUG00000015788	HFM1	59	58.883	ENSACLG00000009033	hfm1	87	65.772	Astatotilapia_calliptera
ENSMEUG00000015788	HFM1	61	61.486	ENSAMXG00000006108	hfm1	62	61.486	Astyanax_mexicanus
ENSMEUG00000015788	HFM1	84	66.667	ENSBTAG00000020856	HFM1	84	66.667	Bos_taurus
ENSMEUG00000015788	HFM1	84	66.667	ENSCJAG00000001843	HFM1	84	66.667	Callithrix_jacchus
ENSMEUG00000015788	HFM1	84	67.816	ENSCAFG00000020187	HFM1	84	67.816	Canis_familiaris
ENSMEUG00000015788	HFM1	84	68.481	ENSTSYG00000014250	HFM1	84	68.481	Carlito_syrichta
ENSMEUG00000015788	HFM1	84	62.931	ENSCPOG00000007421	HFM1	85	62.931	Cavia_porcellus
ENSMEUG00000015788	HFM1	84	66.954	ENSCCAG00000033206	HFM1	84	66.954	Cebus_capucinus
ENSMEUG00000015788	HFM1	84	66.092	ENSCATG00000030987	HFM1	84	66.092	Cercocebus_atys
ENSMEUG00000015788	HFM1	80	85.321	ENSCLAG00000005173	HFM1	81	85.321	Chinchilla_lanigera
ENSMEUG00000015788	HFM1	84	64.470	ENSCGRG00001016995	Hfm1	83	64.470	Cricetulus_griseus_chok1gshd
ENSMEUG00000015788	HFM1	84	64.470	ENSCGRG00000017181	Hfm1	84	64.470	Cricetulus_griseus_crigri
ENSMEUG00000015788	HFM1	65	58.615	ENSCSEG00000017659	hfm1	86	58.615	Cynoglossus_semilaevis
ENSMEUG00000015788	HFM1	50	66.071	ENSDARG00000104288	hfm1	66	66.071	Danio_rerio
ENSMEUG00000015788	HFM1	84	61.298	ENSDNOG00000004776	HFM1	84	61.298	Dasypus_novemcinctus
ENSMEUG00000015788	HFM1	84	64.655	ENSDORG00000014661	Hfm1	84	64.655	Dipodomys_ordii
ENSMEUG00000015788	HFM1	64	75.217	ENSEASG00005015424	HFM1	88	75.217	Equus_asinus_asinus
ENSMEUG00000015788	HFM1	84	64.311	ENSECAG00000024039	HFM1	84	64.311	Equus_caballus
ENSMEUG00000015788	HFM1	57	62.185	ENSELUG00000018944	hfm1	89	62.185	Esox_lucius
ENSMEUG00000015788	HFM1	84	68.391	ENSFCAG00000029116	HFM1	84	68.391	Felis_catus
ENSMEUG00000015788	HFM1	71	63.105	ENSFALG00000001781	HFM1	77	63.105	Ficedula_albicollis
ENSMEUG00000015788	HFM1	84	62.025	ENSFDAG00000020816	HFM1	84	62.025	Fukomys_damarensis
ENSMEUG00000015788	HFM1	61	58.953	ENSGMOG00000017436	hfm1	96	58.953	Gadus_morhua
ENSMEUG00000015788	HFM1	65	60.438	ENSGAFG00000018093	hfm1	89	60.438	Gambusia_affinis
ENSMEUG00000015788	HFM1	61	58.953	ENSGACG00000015686	hfm1	96	58.953	Gasterosteus_aculeatus
ENSMEUG00000015788	HFM1	84	67.241	ENSGGOG00000038524	HFM1	84	67.241	Gorilla_gorilla
ENSMEUG00000015788	HFM1	59	58.883	ENSHBUG00000007309	hfm1	87	58.883	Haplochromis_burtoni
ENSMEUG00000015788	HFM1	65	60.135	ENSIPUG00000017020	hfm1	82	64.242	Ictalurus_punctatus
ENSMEUG00000015788	HFM1	82	65.823	ENSJJAG00000017198	Hfm1	84	65.823	Jaculus_jaculus
ENSMEUG00000015788	HFM1	57	58.725	ENSKMAG00000002282	hfm1	81	58.725	Kryptolebias_marmoratus
ENSMEUG00000015788	HFM1	65	58.784	ENSLBEG00000006759	hfm1	82	64.238	Labrus_bergylta
ENSMEUG00000015788	HFM1	55	74.490	ENSLACG00000010698	HFM1	92	63.545	Latimeria_chalumnae
ENSMEUG00000015788	HFM1	67	62.460	ENSLOCG00000004931	hfm1	89	62.460	Lepisosteus_oculatus
ENSMEUG00000015788	HFM1	84	66.092	ENSMFAG00000003649	HFM1	84	66.092	Macaca_fascicularis
ENSMEUG00000015788	HFM1	84	65.805	ENSMMUG00000006819	HFM1	84	65.805	Macaca_mulatta
ENSMEUG00000015788	HFM1	51	62.667	ENSMAMG00000004623	hfm1	88	62.667	Mastacembelus_armatus
ENSMEUG00000015788	HFM1	59	58.883	ENSMZEG00005004679	hfm1	87	65.772	Maylandia_zebra
ENSMEUG00000015788	HFM1	52	63.688	ENSMGAG00000008437	HFM1	87	72.353	Meleagris_gallopavo
ENSMEUG00000015788	HFM1	84	64.183	ENSMAUG00000018858	Hfm1	84	64.183	Mesocricetus_auratus
ENSMEUG00000015788	HFM1	84	65.903	ENSMICG00000037935	HFM1	84	65.903	Microcebus_murinus
ENSMEUG00000015788	HFM1	84	66.667	ENSMOCG00000014812	Hfm1	84	66.667	Microtus_ochrogaster
ENSMEUG00000015788	HFM1	54	64.744	ENSMMOG00000006148	hfm1	87	64.744	Mola_mola
ENSMEUG00000015788	HFM1	59	59.797	ENSMALG00000002401	hfm1	87	59.797	Monopterus_albus
ENSMEUG00000015788	HFM1	73	78.226	MGP_CAROLIEiJ_G0027496	Hfm1	79	78.226	Mus_caroli
ENSMEUG00000015788	HFM1	84	65.130	ENSMUSG00000043410	Hfm1	100	50.121	Mus_musculus
ENSMEUG00000015788	HFM1	84	65.130	MGP_PahariEiJ_G0017268	Hfm1	100	50.363	Mus_pahari
ENSMEUG00000015788	HFM1	84	64.553	MGP_SPRETEiJ_G0028495	Hfm1	100	50.121	Mus_spretus
ENSMEUG00000015788	HFM1	84	63.384	ENSMPUG00000004594	HFM1	84	63.384	Mustela_putorius_furo
ENSMEUG00000015788	HFM1	84	65.230	ENSMLUG00000010200	HFM1	84	65.230	Myotis_lucifugus
ENSMEUG00000015788	HFM1	62	58.883	ENSNBRG00000002910	hfm1	88	65.584	Neolamprologus_brichardi
ENSMEUG00000015788	HFM1	84	61.485	ENSNLEG00000010285	HFM1	84	61.485	Nomascus_leucogenys
ENSMEUG00000015788	HFM1	61	74.054	ENSOPRG00000013916	HFM1	61	74.054	Ochotona_princeps
ENSMEUG00000015788	HFM1	65	59.000	ENSONIG00000010590	hfm1	91	59.000	Oreochromis_niloticus
ENSMEUG00000015788	HFM1	61	50.859	ENSORLG00020002951	hfm1	70	50.167	Oryzias_latipes_hni
ENSMEUG00000015788	HFM1	66	58.000	ENSOMEG00000016474	hfm1	68	58.000	Oryzias_melastigma
ENSMEUG00000015788	HFM1	80	73.038	ENSOGAG00000032369	HFM1	94	73.038	Otolemur_garnettii
ENSMEUG00000015788	HFM1	84	68.103	ENSOARG00000015812	HFM1	84	68.103	Ovis_aries
ENSMEUG00000015788	HFM1	84	66.954	ENSPPAG00000024582	HFM1	91	66.954	Pan_paniscus
ENSMEUG00000015788	HFM1	84	68.103	ENSPPRG00000003270	HFM1	84	68.103	Panthera_pardus
ENSMEUG00000015788	HFM1	84	67.816	ENSPTIG00000018881	HFM1	84	67.816	Panthera_tigris_altaica
ENSMEUG00000015788	HFM1	84	66.667	ENSPTRG00000000948	HFM1	84	66.667	Pan_troglodytes
ENSMEUG00000015788	HFM1	84	66.092	ENSPANG00000009838	HFM1	84	66.092	Papio_anubis
ENSMEUG00000015788	HFM1	56	60.811	ENSPKIG00000003810	hfm1	80	68.531	Paramormyrops_kingsleyae
ENSMEUG00000015788	HFM1	84	66.379	ENSPEMG00000022852	Hfm1	84	66.379	Peromyscus_maniculatus_bairdii
ENSMEUG00000015788	HFM1	84	79.284	ENSPCIG00000014233	HFM1	84	79.284	Phascolarctos_cinereus
ENSMEUG00000015788	HFM1	65	60.575	ENSPFOG00000017194	hfm1	92	60.575	Poecilia_formosa
ENSMEUG00000015788	HFM1	65	60.570	ENSPLAG00000000571	hfm1	85	60.066	Poecilia_latipinna
ENSMEUG00000015788	HFM1	66	60.165	ENSPMEG00000019475	hfm1	85	60.165	Poecilia_mexicana
ENSMEUG00000015788	HFM1	65	60.406	ENSPREG00000007803	hfm1	86	60.406	Poecilia_reticulata
ENSMEUG00000015788	HFM1	84	66.954	ENSPPYG00000001163	HFM1	84	66.954	Pongo_abelii
ENSMEUG00000015788	HFM1	63	68.161	ENSPCAG00000004289	-	63	68.161	Procavia_capensis
ENSMEUG00000015788	HFM1	69	86.420	ENSPVAG00000009713	HFM1	71	86.420	Pteropus_vampyrus
ENSMEUG00000015788	HFM1	59	58.883	ENSPNYG00000001795	hfm1	87	65.772	Pundamilia_nyererei
ENSMEUG00000015788	HFM1	53	68.519	ENSPNAG00000010865	hfm1	76	68.519	Pygocentrus_nattereri
ENSMEUG00000015788	HFM1	84	61.905	ENSRNOG00000023299	Hfm1	84	61.905	Rattus_norvegicus
ENSMEUG00000015788	HFM1	84	64.943	ENSRROG00000045569	HFM1	84	64.943	Rhinopithecus_roxellana
ENSMEUG00000015788	HFM1	83	66.567	ENSSBOG00000027456	HFM1	84	66.567	Saimiri_boliviensis_boliviensis
ENSMEUG00000015788	HFM1	59	72.486	ENSSHAG00000014616	-	98	72.486	Sarcophilus_harrisii
ENSMEUG00000015788	HFM1	62	61.148	ENSSFOG00015020129	hfm1	60	61.833	Scleropages_formosus
ENSMEUG00000015788	HFM1	56	58.557	ENSSMAG00000006907	hfm1	79	58.557	Scophthalmus_maximus
ENSMEUG00000015788	HFM1	53	64.516	ENSSDUG00000011424	hfm1	85	64.516	Seriola_dumerili
ENSMEUG00000015788	HFM1	54	65.161	ENSSLDG00000016386	hfm1	86	65.161	Seriola_lalandi_dorsalis
ENSMEUG00000015788	HFM1	54	65.926	ENSSPAG00000001023	hfm1	86	66.234	Stegastes_partitus
ENSMEUG00000015788	HFM1	84	63.657	ENSSSCG00000006912	HFM1	91	63.657	Sus_scrofa
ENSMEUG00000015788	HFM1	61	68.919	ENSTGUG00000006172	HFM1	92	68.919	Taeniopygia_guttata
ENSMEUG00000015788	HFM1	84	66.667	ENSTTRG00000013933	HFM1	85	66.667	Tursiops_truncatus
ENSMEUG00000015788	HFM1	77	69.297	ENSVPAG00000011331	HFM1	76	69.297	Vicugna_pacos
ENSMEUG00000015788	HFM1	64	74.177	ENSVVUG00000020760	HFM1	90	74.177	Vulpes_vulpes
ENSMEUG00000015788	HFM1	61	65.035	ENSXMAG00000004178	hfm1	86	65.035	Xiphophorus_maculatus