EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMEUG00000015804 (Gene tree)
Gene ID: -
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 141087 bases
Position: chrGeneScaffold_790:942-142028
Accession: 17809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000014437	EST1	PF10374.9	1.8e-14	1	1
ENSMEUP00000014437	EST1_DNA_bind	PF10373.9	2e-61	1	1
ENSMEUP00000014437	PIN_4	PF13638.6	3.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000015854	SMG6-201	4155	-	ENSMEUP00000014437	1384 (aa)	-	UPI0001B22AC2

Gene Model

Click here to download ENSMEUG00000015804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000015804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000015804	SMG6	100	81.681	ENSG00000070366	SMG6	100	94.129	Homo_sapiens
ENSMEUG00000015804	SMG6	89	51.917	ENSAPOG00000019448	smg6	79	52.570	Acanthochromis_polyacanthus
ENSMEUG00000015804	SMG6	100	82.471	ENSAMEG00000007632	SMG6	98	82.471	Ailuropoda_melanoleuca
ENSMEUG00000015804	SMG6	77	57.419	ENSACIG00000012997	smg6	78	54.779	Amphilophus_citrinellus
ENSMEUG00000015804	SMG6	85	54.124	ENSAOCG00000002630	smg6	74	54.624	Amphiprion_ocellaris
ENSMEUG00000015804	SMG6	85	53.888	ENSAPEG00000019101	smg6	74	54.702	Amphiprion_percula
ENSMEUG00000015804	SMG6	87	54.391	ENSATEG00000006483	smg6	75	54.580	Anabas_testudineus
ENSMEUG00000015804	SMG6	86	55.717	ENSACAG00000011783	SMG6	97	56.820	Anolis_carolinensis
ENSMEUG00000015804	SMG6	100	81.537	ENSANAG00000035760	SMG6	98	81.537	Aotus_nancymaae
ENSMEUG00000015804	SMG6	73	58.440	ENSACLG00000005288	smg6	80	54.581	Astatotilapia_calliptera
ENSMEUG00000015804	SMG6	70	61.717	ENSAMXG00000017326	smg6	91	52.608	Astyanax_mexicanus
ENSMEUG00000015804	SMG6	99	82.997	ENSBTAG00000000267	SMG6	98	82.997	Bos_taurus
ENSMEUG00000015804	SMG6	100	81.609	ENSCJAG00000001820	SMG6	98	81.609	Callithrix_jacchus
ENSMEUG00000015804	SMG6	99	82.565	ENSCAFG00000019260	SMG6	98	82.565	Canis_familiaris
ENSMEUG00000015804	SMG6	99	82.565	ENSCAFG00020009770	SMG6	98	82.565	Canis_lupus_dingo
ENSMEUG00000015804	SMG6	99	82.421	ENSCHIG00000021998	SMG6	98	82.421	Capra_hircus
ENSMEUG00000015804	SMG6	100	81.681	ENSTSYG00000003406	SMG6	100	94.129	Carlito_syrichta
ENSMEUG00000015804	SMG6	92	80.328	ENSCAPG00000016197	SMG6	99	80.328	Cavia_aperea
ENSMEUG00000015804	SMG6	100	79.756	ENSCPOG00000014878	SMG6	98	89.610	Cavia_porcellus
ENSMEUG00000015804	SMG6	100	81.609	ENSCCAG00000035801	SMG6	98	81.609	Cebus_capucinus
ENSMEUG00000015804	SMG6	100	82.399	ENSCATG00000031956	SMG6	98	82.399	Cercocebus_atys
ENSMEUG00000015804	SMG6	100	81.753	ENSCLAG00000006748	SMG6	95	91.630	Chinchilla_lanigera
ENSMEUG00000015804	SMG6	100	82.615	ENSCSAG00000013800	SMG6	98	82.615	Chlorocebus_sabaeus
ENSMEUG00000015804	SMG6	51	95.522	ENSCHOG00000005024	-	63	95.522	Choloepus_hoffmanni
ENSMEUG00000015804	SMG6	100	70.107	ENSCPBG00000020369	SMG6	98	70.747	Chrysemys_picta_bellii
ENSMEUG00000015804	SMG6	100	82.328	ENSCANG00000031764	SMG6	100	94.521	Colobus_angolensis_palliatus
ENSMEUG00000015804	SMG6	56	76.667	ENSCGRG00001019595	Smg6	94	72.185	Cricetulus_griseus_chok1gshd
ENSMEUG00000015804	SMG6	99	75.341	ENSCGRG00000007782	Smg6	100	75.557	Cricetulus_griseus_crigri
ENSMEUG00000015804	SMG6	89	53.125	ENSCSEG00000012757	smg6	82	52.632	Cynoglossus_semilaevis
ENSMEUG00000015804	SMG6	73	57.942	ENSCVAG00000012789	smg6	74	54.474	Cyprinodon_variegatus
ENSMEUG00000015804	SMG6	88	53.266	ENSDARG00000100481	smg6	78	54.235	Danio_rerio
ENSMEUG00000015804	SMG6	100	81.505	ENSDNOG00000048283	SMG6	98	82.112	Dasypus_novemcinctus
ENSMEUG00000015804	SMG6	96	94.384	ENSDORG00000016614	Smg6	98	94.384	Dipodomys_ordii
ENSMEUG00000015804	SMG6	93	95.238	ENSETEG00000016790	SMG6	91	95.238	Echinops_telfairi
ENSMEUG00000015804	SMG6	70	49.806	ENSEBUG00000005059	smg6	68	48.887	Eptatretus_burgeri
ENSMEUG00000015804	SMG6	99	82.612	ENSEASG00005009318	SMG6	97	82.612	Equus_asinus_asinus
ENSMEUG00000015804	SMG6	99	82.468	ENSECAG00000006519	SMG6	97	82.468	Equus_caballus
ENSMEUG00000015804	SMG6	99	73.165	ENSEEUG00000003493	SMG6	98	73.165	Erinaceus_europaeus
ENSMEUG00000015804	SMG6	73	58.834	ENSELUG00000005934	smg6	69	54.475	Esox_lucius
ENSMEUG00000015804	SMG6	99	82.997	ENSFCAG00000028817	SMG6	98	82.997	Felis_catus
ENSMEUG00000015804	SMG6	99	70.685	ENSFALG00000006538	SMG6	100	70.949	Ficedula_albicollis
ENSMEUG00000015804	SMG6	100	81.322	ENSFDAG00000015106	SMG6	96	89.956	Fukomys_damarensis
ENSMEUG00000015804	SMG6	88	53.533	ENSFHEG00000013282	smg6	76	53.952	Fundulus_heteroclitus
ENSMEUG00000015804	SMG6	54	62.441	ENSGMOG00000019077	smg6	58	62.441	Gadus_morhua
ENSMEUG00000015804	SMG6	100	70.584	ENSGALG00000003108	SMG6	96	70.584	Gallus_gallus
ENSMEUG00000015804	SMG6	88	53.405	ENSGAFG00000000379	smg6	77	53.550	Gambusia_affinis
ENSMEUG00000015804	SMG6	92	52.643	ENSGACG00000020521	smg6	99	53.120	Gasterosteus_aculeatus
ENSMEUG00000015804	SMG6	99	70.014	ENSGAGG00000025617	SMG6	100	70.655	Gopherus_agassizii
ENSMEUG00000015804	SMG6	100	82.471	ENSGGOG00000017156	SMG6	98	82.471	Gorilla_gorilla
ENSMEUG00000015804	SMG6	73	58.662	ENSHBUG00000021311	smg6	74	55.035	Haplochromis_burtoni
ENSMEUG00000015804	SMG6	100	81.133	ENSHGLG00000012882	SMG6	96	91.266	Heterocephalus_glaber_female
ENSMEUG00000015804	SMG6	100	81.205	ENSHGLG00100017815	SMG6	96	91.266	Heterocephalus_glaber_male
ENSMEUG00000015804	SMG6	73	57.224	ENSHCOG00000008761	smg6	83	58.476	Hippocampus_comes
ENSMEUG00000015804	SMG6	85	54.964	ENSIPUG00000012493	smg6	75	55.214	Ictalurus_punctatus
ENSMEUG00000015804	SMG6	100	82.615	ENSSTOG00000028127	SMG6	97	91.266	Ictidomys_tridecemlineatus
ENSMEUG00000015804	SMG6	78	77.148	ENSJJAG00000015367	Smg6	93	75.510	Jaculus_jaculus
ENSMEUG00000015804	SMG6	91	52.067	ENSKMAG00000000279	smg6	79	53.187	Kryptolebias_marmoratus
ENSMEUG00000015804	SMG6	88	52.072	ENSLBEG00000002184	smg6	74	53.763	Labrus_bergylta
ENSMEUG00000015804	SMG6	56	54.926	ENSLACG00000000806	-	98	56.010	Latimeria_chalumnae
ENSMEUG00000015804	SMG6	73	65.425	ENSLOCG00000006448	smg6	86	60.081	Lepisosteus_oculatus
ENSMEUG00000015804	SMG6	100	81.466	ENSLAFG00000001261	SMG6	98	81.466	Loxodonta_africana
ENSMEUG00000015804	SMG6	100	82.615	ENSMFAG00000003394	SMG6	98	82.615	Macaca_fascicularis
ENSMEUG00000015804	SMG6	100	82.471	ENSMMUG00000023161	SMG6	98	82.471	Macaca_mulatta
ENSMEUG00000015804	SMG6	100	78.423	ENSMNEG00000044592	SMG6	95	94.727	Macaca_nemestrina
ENSMEUG00000015804	SMG6	95	94.737	ENSMLEG00000029353	SMG6	99	94.727	Mandrillus_leucophaeus
ENSMEUG00000015804	SMG6	88	54.208	ENSMAMG00000020119	smg6	79	55.374	Mastacembelus_armatus
ENSMEUG00000015804	SMG6	73	58.532	ENSMZEG00005024736	smg6	74	54.910	Maylandia_zebra
ENSMEUG00000015804	SMG6	73	64.541	ENSMGAG00000005401	-	97	64.541	Meleagris_gallopavo
ENSMEUG00000015804	SMG6	100	82.759	ENSMICG00000012913	SMG6	98	82.759	Microcebus_murinus
ENSMEUG00000015804	SMG6	88	52.819	ENSMMOG00000010883	smg6	80	53.745	Mola_mola
ENSMEUG00000015804	SMG6	100	88.969	ENSMODG00000010622	SMG6	98	89.041	Monodelphis_domestica
ENSMEUG00000015804	SMG6	85	53.822	ENSMALG00000001106	smg6	73	54.397	Monopterus_albus
ENSMEUG00000015804	SMG6	100	81.753	MGP_CAROLIEiJ_G0016729	Smg6	96	91.266	Mus_caroli
ENSMEUG00000015804	SMG6	100	82.112	ENSMUSG00000038290	Smg6	96	91.703	Mus_musculus
ENSMEUG00000015804	SMG6	100	81.537	MGP_PahariEiJ_G0017866	Smg6	96	91.703	Mus_pahari
ENSMEUG00000015804	SMG6	100	81.897	MGP_SPRETEiJ_G0017572	Smg6	97	90.909	Mus_spretus
ENSMEUG00000015804	SMG6	99	82.925	ENSMPUG00000013046	SMG6	98	82.925	Mustela_putorius_furo
ENSMEUG00000015804	SMG6	100	81.681	ENSMLUG00000005739	SMG6	98	81.681	Myotis_lucifugus
ENSMEUG00000015804	SMG6	100	81.537	ENSNGAG00000007287	Smg6	100	86.920	Nannospalax_galili
ENSMEUG00000015804	SMG6	73	58.372	ENSNBRG00000009511	smg6	81	54.346	Neolamprologus_brichardi
ENSMEUG00000015804	SMG6	99	82.171	ENSNLEG00000017171	SMG6	100	94.325	Nomascus_leucogenys
ENSMEUG00000015804	SMG6	63	78.452	ENSOPRG00000000579	SMG6	92	78.452	Ochotona_princeps
ENSMEUG00000015804	SMG6	96	92.368	ENSODEG00000008038	SMG6	98	92.368	Octodon_degus
ENSMEUG00000015804	SMG6	92	53.107	ENSONIG00000005594	smg6	90	54.210	Oreochromis_niloticus
ENSMEUG00000015804	SMG6	100	81.133	ENSOCUG00000013018	SMG6	98	81.349	Oryctolagus_cuniculus
ENSMEUG00000015804	SMG6	91	51.747	ENSORLG00000003317	smg6	79	51.822	Oryzias_latipes
ENSMEUG00000015804	SMG6	91	51.822	ENSORLG00020015343	smg6	79	52.455	Oryzias_latipes_hni
ENSMEUG00000015804	SMG6	91	51.634	ENSORLG00015020454	smg6	79	52.151	Oryzias_latipes_hsok
ENSMEUG00000015804	SMG6	89	52.226	ENSOMEG00000010838	smg6	78	52.453	Oryzias_melastigma
ENSMEUG00000015804	SMG6	100	82.699	ENSOGAG00000004483	SMG6	98	82.699	Otolemur_garnettii
ENSMEUG00000015804	SMG6	100	82.399	ENSOARG00000015076	SMG6	100	82.637	Ovis_aries
ENSMEUG00000015804	SMG6	100	82.184	ENSPPAG00000043296	SMG6	98	82.184	Pan_paniscus
ENSMEUG00000015804	SMG6	99	83.141	ENSPPRG00000014581	SMG6	98	83.141	Panthera_pardus
ENSMEUG00000015804	SMG6	99	83.141	ENSPTIG00000008925	SMG6	100	95.303	Panthera_tigris_altaica
ENSMEUG00000015804	SMG6	100	82.112	ENSPTRG00000008544	SMG6	100	94.129	Pan_troglodytes
ENSMEUG00000015804	SMG6	100	82.543	ENSPANG00000024588	SMG6	98	82.543	Papio_anubis
ENSMEUG00000015804	SMG6	90	68.500	ENSPSIG00000006660	SMG6	96	68.578	Pelodiscus_sinensis
ENSMEUG00000015804	SMG6	88	53.246	ENSPMGG00000000844	smg6	89	60.925	Periophthalmus_magnuspinnatus
ENSMEUG00000015804	SMG6	100	82.256	ENSPEMG00000020707	Smg6	98	90.830	Peromyscus_maniculatus_bairdii
ENSMEUG00000015804	SMG6	92	53.438	ENSPFOG00000012035	smg6	90	53.927	Poecilia_formosa
ENSMEUG00000015804	SMG6	78	55.952	ENSPLAG00000017660	smg6	74	54.160	Poecilia_latipinna
ENSMEUG00000015804	SMG6	74	57.923	ENSPMEG00000000258	smg6	74	54.818	Poecilia_mexicana
ENSMEUG00000015804	SMG6	78	55.735	ENSPREG00000010066	smg6	74	54.301	Poecilia_reticulata
ENSMEUG00000015804	SMG6	100	76.631	ENSPPYG00000007790	SMG6	98	76.631	Pongo_abelii
ENSMEUG00000015804	SMG6	100	77.874	ENSPCAG00000000552	SMG6	98	77.874	Procavia_capensis
ENSMEUG00000015804	SMG6	100	82.256	ENSPCOG00000020925	SMG6	98	82.256	Propithecus_coquereli
ENSMEUG00000015804	SMG6	86	82.912	ENSPVAG00000002159	SMG6	84	82.912	Pteropus_vampyrus
ENSMEUG00000015804	SMG6	85	53.381	ENSPNYG00000024151	smg6	79	56.866	Pundamilia_nyererei
ENSMEUG00000015804	SMG6	87	51.928	ENSPNAG00000015480	smg6	75	63.914	Pygocentrus_nattereri
ENSMEUG00000015804	SMG6	100	82.112	ENSRNOG00000003041	Smg6	95	85.799	Rattus_norvegicus
ENSMEUG00000015804	SMG6	100	82.112	ENSRBIG00000024746	SMG6	98	82.112	Rhinopithecus_bieti
ENSMEUG00000015804	SMG6	100	82.112	ENSRROG00000030423	SMG6	100	94.129	Rhinopithecus_roxellana
ENSMEUG00000015804	SMG6	100	81.825	ENSSBOG00000022518	SMG6	98	80.316	Saimiri_boliviensis_boliviensis
ENSMEUG00000015804	SMG6	100	90.418	ENSSHAG00000010045	SMG6	98	90.418	Sarcophilus_harrisii
ENSMEUG00000015804	SMG6	73	61.581	ENSSFOG00015005436	smg6	70	57.686	Scleropages_formosus
ENSMEUG00000015804	SMG6	85	54.984	ENSSMAG00000019777	smg6	73	55.331	Scophthalmus_maximus
ENSMEUG00000015804	SMG6	85	54.766	ENSSDUG00000016412	smg6	74	54.756	Seriola_dumerili
ENSMEUG00000015804	SMG6	82	54.002	ENSSLDG00000020747	smg6	77	53.970	Seriola_lalandi_dorsalis
ENSMEUG00000015804	SMG6	99	69.534	ENSSPUG00000007152	SMG6	98	69.534	Sphenodon_punctatus
ENSMEUG00000015804	SMG6	85	53.622	ENSSPAG00000015633	smg6	74	54.431	Stegastes_partitus
ENSMEUG00000015804	SMG6	99	82.433	ENSSSCG00000017826	SMG6	99	81.866	Sus_scrofa
ENSMEUG00000015804	SMG6	100	70.407	ENSTGUG00000005836	SMG6	98	70.529	Taeniopygia_guttata
ENSMEUG00000015804	SMG6	85	54.283	ENSTRUG00000000358	smg6	81	54.567	Takifugu_rubripes
ENSMEUG00000015804	SMG6	92	52.139	ENSTNIG00000016164	smg6	90	52.612	Tetraodon_nigroviridis
ENSMEUG00000015804	SMG6	100	77.802	ENSTBEG00000011424	SMG6	98	77.802	Tupaia_belangeri
ENSMEUG00000015804	SMG6	90	88.182	ENSTTRG00000001175	SMG6	89	88.182	Tursiops_truncatus
ENSMEUG00000015804	SMG6	99	82.818	ENSUAMG00000025152	SMG6	100	82.818	Ursus_americanus
ENSMEUG00000015804	SMG6	99	82.853	ENSUMAG00000009306	SMG6	100	82.853	Ursus_maritimus
ENSMEUG00000015804	SMG6	84	96.296	ENSVPAG00000000225	SMG6	85	96.296	Vicugna_pacos
ENSMEUG00000015804	SMG6	99	82.565	ENSVVUG00000021727	SMG6	98	82.565	Vulpes_vulpes
ENSMEUG00000015804	SMG6	100	58.592	ENSXETG00000023799	SMG6	99	59.094	Xenopus_tropicalis
ENSMEUG00000015804	SMG6	88	53.763	ENSXCOG00000009867	smg6	74	55.164	Xiphophorus_couchianus
ENSMEUG00000015804	SMG6	88	53.517	ENSXMAG00000010321	smg6	77	53.723	Xiphophorus_maculatus