EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000015909 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 35087 bases
Position: chrGeneScaffold_5752:8004-43090
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000014538	DND1_DSRM	PF14709.7	3.5e-25	1	1
ENSMEUP00000014538	RRM_1	PF00076.22	6.2e-39	1	3
ENSMEUP00000014538	RRM_1	PF00076.22	6.2e-39	2	3
ENSMEUP00000014538	RRM_1	PF00076.22	6.2e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000015958	A1CF-201	1653	-	ENSMEUP00000014538	550 (aa)	-	UPI0001B215B3

Gene Model

Click here to download ENSMEUG00000015909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000015909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000015909	A1CF	85	52.239	ENSMEUG00000013328	RBM46	100	52.239
ENSMEUG00000015909	A1CF	73	58.394	ENSMEUG00000009516	-	92	58.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000015909	A1CF	100	91.155	ENSG00000148584	A1CF	94	91.155	Homo_sapiens
ENSMEUG00000015909	A1CF	100	74.061	ENSAPOG00000008259	a1cf	94	73.882	Acanthochromis_polyacanthus
ENSMEUG00000015909	A1CF	100	87.857	ENSAMEG00000000523	A1CF	94	88.214	Ailuropoda_melanoleuca
ENSMEUG00000015909	A1CF	100	76.357	ENSACIG00000008632	a1cf	94	77.758	Amphilophus_citrinellus
ENSMEUG00000015909	A1CF	100	74.427	ENSAOCG00000023744	a1cf	88	83.386	Amphiprion_ocellaris
ENSMEUG00000015909	A1CF	100	73.391	ENSAPEG00000009537	a1cf	94	74.261	Amphiprion_percula
ENSMEUG00000015909	A1CF	100	76.224	ENSATEG00000013720	a1cf	94	77.622	Anabas_testudineus
ENSMEUG00000015909	A1CF	100	89.427	ENSAPLG00000002964	A1CF	94	89.427	Anas_platyrhynchos
ENSMEUG00000015909	A1CF	100	86.727	ENSACAG00000015269	A1CF	94	86.727	Anolis_carolinensis
ENSMEUG00000015909	A1CF	100	91.697	ENSANAG00000019974	A1CF	94	91.697	Aotus_nancymaae
ENSMEUG00000015909	A1CF	100	74.513	ENSACLG00000017428	a1cf	94	76.325	Astatotilapia_calliptera
ENSMEUG00000015909	A1CF	95	76.471	ENSAMXG00000018180	a1cf	93	76.471	Astyanax_mexicanus
ENSMEUG00000015909	A1CF	100	90.090	ENSBTAG00000021195	A1CF	94	90.654	Bos_taurus
ENSMEUG00000015909	A1CF	100	90.036	ENSCJAG00000005045	A1CF	94	90.036	Callithrix_jacchus
ENSMEUG00000015909	A1CF	100	88.372	ENSCAFG00000015581	A1CF	94	88.730	Canis_familiaris
ENSMEUG00000015909	A1CF	100	88.372	ENSCAFG00020026421	A1CF	98	91.919	Canis_lupus_dingo
ENSMEUG00000015909	A1CF	100	88.277	ENSCHIG00000020411	A1CF	94	88.277	Capra_hircus
ENSMEUG00000015909	A1CF	100	90.399	ENSTSYG00000001755	A1CF	100	90.761	Carlito_syrichta
ENSMEUG00000015909	A1CF	92	92.276	ENSCAPG00000017386	A1CF	90	92.276	Cavia_aperea
ENSMEUG00000015909	A1CF	100	88.968	ENSCPOG00000009807	A1CF	94	88.968	Cavia_porcellus
ENSMEUG00000015909	A1CF	100	90.018	ENSCCAG00000018168	A1CF	94	90.018	Cebus_capucinus
ENSMEUG00000015909	A1CF	100	91.304	ENSCATG00000043715	A1CF	94	91.486	Cercocebus_atys
ENSMEUG00000015909	A1CF	100	88.475	ENSCLAG00000010424	A1CF	94	88.121	Chinchilla_lanigera
ENSMEUG00000015909	A1CF	100	90.357	ENSCSAG00000007032	A1CF	94	90.536	Chlorocebus_sabaeus
ENSMEUG00000015909	A1CF	100	88.869	ENSCHOG00000009089	A1CF	94	88.869	Choloepus_hoffmanni
ENSMEUG00000015909	A1CF	100	89.247	ENSCPBG00000026464	A1CF	94	89.247	Chrysemys_picta_bellii
ENSMEUG00000015909	A1CF	100	90.357	ENSCANG00000038032	A1CF	94	90.536	Colobus_angolensis_palliatus
ENSMEUG00000015909	A1CF	100	86.679	ENSCGRG00001017413	A1cf	94	86.679	Cricetulus_griseus_chok1gshd
ENSMEUG00000015909	A1CF	100	85.968	ENSCGRG00000017332	A1cf	94	86.146	Cricetulus_griseus_crigri
ENSMEUG00000015909	A1CF	100	75.220	ENSCSEG00000002361	a1cf	94	76.274	Cynoglossus_semilaevis
ENSMEUG00000015909	A1CF	100	74.825	ENSCVAG00000010520	a1cf	94	77.273	Cyprinodon_variegatus
ENSMEUG00000015909	A1CF	100	79.713	ENSDARG00000002968	a1cf	94	80.969	Danio_rerio
ENSMEUG00000015909	A1CF	100	87.922	ENSDNOG00000002829	A1CF	94	88.099	Dasypus_novemcinctus
ENSMEUG00000015909	A1CF	83	94.922	ENSETEG00000012527	A1CF	78	94.922	Echinops_telfairi
ENSMEUG00000015909	A1CF	100	89.027	ENSEASG00005012924	A1CF	97	89.027	Equus_asinus_asinus
ENSMEUG00000015909	A1CF	100	88.850	ENSECAG00000010424	A1CF	94	88.850	Equus_caballus
ENSMEUG00000015909	A1CF	83	78.649	ENSEEUG00000000013	A1CF	97	79.821	Erinaceus_europaeus
ENSMEUG00000015909	A1CF	100	78.508	ENSELUG00000003159	a1cf	94	78.508	Esox_lucius
ENSMEUG00000015909	A1CF	100	89.130	ENSFCAG00000011179	A1CF	94	89.493	Felis_catus
ENSMEUG00000015909	A1CF	100	89.273	ENSFALG00000013183	A1CF	94	89.273	Ficedula_albicollis
ENSMEUG00000015909	A1CF	100	89.189	ENSFDAG00000019371	A1CF	94	89.189	Fukomys_damarensis
ENSMEUG00000015909	A1CF	92	73.814	ENSFHEG00000019652	a1cf	90	76.471	Fundulus_heteroclitus
ENSMEUG00000015909	A1CF	100	69.755	ENSGMOG00000018943	a1cf	94	69.930	Gadus_morhua
ENSMEUG00000015909	A1CF	100	88.351	ENSGALG00000003765	A1CF	96	88.351	Gallus_gallus
ENSMEUG00000015909	A1CF	100	71.201	ENSGAFG00000014868	a1cf	94	71.201	Gambusia_affinis
ENSMEUG00000015909	A1CF	100	73.519	ENSGACG00000010241	a1cf	94	73.868	Gasterosteus_aculeatus
ENSMEUG00000015909	A1CF	100	89.068	ENSGAGG00000016508	A1CF	97	89.068	Gopherus_agassizii
ENSMEUG00000015909	A1CF	100	89.680	ENSGGOG00000009670	A1CF	94	89.680	Gorilla_gorilla
ENSMEUG00000015909	A1CF	100	76.007	ENSHBUG00000021959	a1cf	94	77.583	Haplochromis_burtoni
ENSMEUG00000015909	A1CF	100	89.165	ENSHGLG00000008955	A1CF	94	88.632	Heterocephalus_glaber_female
ENSMEUG00000015909	A1CF	100	88.455	ENSHGLG00100000518	A1CF	94	87.922	Heterocephalus_glaber_male
ENSMEUG00000015909	A1CF	94	71.978	ENSHCOG00000017669	a1cf	94	73.057	Hippocampus_comes
ENSMEUG00000015909	A1CF	89	81.710	ENSIPUG00000010367	a1cf	90	81.710	Ictalurus_punctatus
ENSMEUG00000015909	A1CF	100	76.420	ENSKMAG00000006568	a1cf	94	76.248	Kryptolebias_marmoratus
ENSMEUG00000015909	A1CF	99	73.657	ENSLBEG00000020994	a1cf	93	75.567	Labrus_bergylta
ENSMEUG00000015909	A1CF	100	82.821	ENSLACG00000008061	A1CF	94	82.821	Latimeria_chalumnae
ENSMEUG00000015909	A1CF	100	82.562	ENSLOCG00000006302	a1cf	94	82.562	Lepisosteus_oculatus
ENSMEUG00000015909	A1CF	100	88.810	ENSLAFG00000015462	A1CF	94	88.988	Loxodonta_africana
ENSMEUG00000015909	A1CF	100	91.667	ENSMFAG00000035948	A1CF	94	91.848	Macaca_fascicularis
ENSMEUG00000015909	A1CF	100	91.667	ENSMMUG00000007077	A1CF	94	91.848	Macaca_mulatta
ENSMEUG00000015909	A1CF	100	91.304	ENSMNEG00000031454	A1CF	94	91.486	Macaca_nemestrina
ENSMEUG00000015909	A1CF	100	90.000	ENSMLEG00000037223	A1CF	94	90.179	Mandrillus_leucophaeus
ENSMEUG00000015909	A1CF	100	73.989	ENSMAMG00000010402	a1cf	94	75.923	Mastacembelus_armatus
ENSMEUG00000015909	A1CF	100	75.801	ENSMZEG00005013245	a1cf	94	76.868	Maylandia_zebra
ENSMEUG00000015909	A1CF	100	88.014	ENSMGAG00000001507	A1CF	94	88.014	Meleagris_gallopavo
ENSMEUG00000015909	A1CF	100	85.435	ENSMAUG00000007422	A1cf	94	85.613	Mesocricetus_auratus
ENSMEUG00000015909	A1CF	100	89.068	ENSMICG00000003377	A1CF	94	89.247	Microcebus_murinus
ENSMEUG00000015909	A1CF	100	86.323	ENSMOCG00000021536	A1cf	94	86.501	Microtus_ochrogaster
ENSMEUG00000015909	A1CF	93	71.917	ENSMMOG00000009422	a1cf	94	70.194	Mola_mola
ENSMEUG00000015909	A1CF	91	95.040	ENSMODG00000016478	A1CF	94	95.040	Monodelphis_domestica
ENSMEUG00000015909	A1CF	100	73.105	ENSMALG00000012992	a1cf	94	73.105	Monopterus_albus
ENSMEUG00000015909	A1CF	100	87.027	MGP_CAROLIEiJ_G0022873	A1cf	94	87.207	Mus_caroli
ENSMEUG00000015909	A1CF	100	87.027	ENSMUSG00000052595	A1cf	99	91.919	Mus_musculus
ENSMEUG00000015909	A1CF	100	87.207	MGP_PahariEiJ_G0014366	A1cf	94	87.027	Mus_pahari
ENSMEUG00000015909	A1CF	100	86.667	MGP_SPRETEiJ_G0023792	A1cf	94	86.847	Mus_spretus
ENSMEUG00000015909	A1CF	100	82.500	ENSMPUG00000016971	A1CF	94	82.857	Mustela_putorius_furo
ENSMEUG00000015909	A1CF	100	87.211	ENSMLUG00000016071	A1CF	94	87.211	Myotis_lucifugus
ENSMEUG00000015909	A1CF	100	87.744	ENSNGAG00000015136	A1cf	94	87.922	Nannospalax_galili
ENSMEUG00000015909	A1CF	100	76.357	ENSNBRG00000001712	a1cf	94	77.933	Neolamprologus_brichardi
ENSMEUG00000015909	A1CF	100	89.698	ENSNLEG00000012028	A1CF	97	88.000	Nomascus_leucogenys
ENSMEUG00000015909	A1CF	88	79.108	ENSOPRG00000010667	A1CF	91	78.831	Ochotona_princeps
ENSMEUG00000015909	A1CF	100	75.832	ENSONIG00000019105	a1cf	94	77.583	Oreochromis_niloticus
ENSMEUG00000015909	A1CF	77	90.610	ENSOANG00000007360	A1CF	92	90.610	Ornithorhynchus_anatinus
ENSMEUG00000015909	A1CF	100	88.309	ENSOCUG00000011587	A1CF	94	88.489	Oryctolagus_cuniculus
ENSMEUG00000015909	A1CF	100	73.693	ENSORLG00000013342	a1cf	94	73.693	Oryzias_latipes
ENSMEUG00000015909	A1CF	100	74.003	ENSORLG00020000586	a1cf	94	74.350	Oryzias_latipes_hni
ENSMEUG00000015909	A1CF	100	74.177	ENSORLG00015018569	a1cf	94	74.523	Oryzias_latipes_hsok
ENSMEUG00000015909	A1CF	100	75.747	ENSOMEG00000013531	a1cf	94	75.747	Oryzias_melastigma
ENSMEUG00000015909	A1CF	100	88.929	ENSOGAG00000012884	A1CF	94	89.286	Otolemur_garnettii
ENSMEUG00000015909	A1CF	100	88.455	ENSOARG00000013695	A1CF	94	88.455	Ovis_aries
ENSMEUG00000015909	A1CF	100	89.680	ENSPPAG00000028115	A1CF	93	92.208	Pan_paniscus
ENSMEUG00000015909	A1CF	100	88.214	ENSPPRG00000012180	A1CF	94	88.571	Panthera_pardus
ENSMEUG00000015909	A1CF	100	88.214	ENSPTIG00000021223	A1CF	94	88.571	Panthera_tigris_altaica
ENSMEUG00000015909	A1CF	100	91.155	ENSPTRG00000002508	A1CF	97	89.858	Pan_troglodytes
ENSMEUG00000015909	A1CF	100	91.667	ENSPANG00000021988	A1CF	94	91.848	Papio_anubis
ENSMEUG00000015909	A1CF	100	79.965	ENSPKIG00000025176	a1cf	94	80.142	Paramormyrops_kingsleyae
ENSMEUG00000015909	A1CF	100	90.182	ENSPSIG00000010318	A1CF	94	90.182	Pelodiscus_sinensis
ENSMEUG00000015909	A1CF	98	66.728	ENSPMGG00000013359	a1cf	93	68.066	Periophthalmus_magnuspinnatus
ENSMEUG00000015909	A1CF	100	87.567	ENSPEMG00000015021	A1cf	94	87.211	Peromyscus_maniculatus_bairdii
ENSMEUG00000015909	A1CF	100	97.273	ENSPCIG00000002175	A1CF	94	97.273	Phascolarctos_cinereus
ENSMEUG00000015909	A1CF	100	73.966	ENSPFOG00000006683	a1cf	94	76.379	Poecilia_formosa
ENSMEUG00000015909	A1CF	100	73.793	ENSPFOG00000007437	-	94	76.207	Poecilia_formosa
ENSMEUG00000015909	A1CF	100	74.825	ENSPLAG00000000026	a1cf	94	77.273	Poecilia_latipinna
ENSMEUG00000015909	A1CF	100	74.825	ENSPLAG00000001210	-	94	77.273	Poecilia_latipinna
ENSMEUG00000015909	A1CF	100	67.018	ENSPMEG00000000921	a1cf	94	69.474	Poecilia_mexicana
ENSMEUG00000015909	A1CF	100	66.090	ENSPMEG00000015529	-	94	68.512	Poecilia_mexicana
ENSMEUG00000015909	A1CF	100	73.793	ENSPREG00000016298	a1cf	94	76.207	Poecilia_reticulata
ENSMEUG00000015909	A1CF	100	90.991	ENSPPYG00000002819	A1CF	94	91.171	Pongo_abelii
ENSMEUG00000015909	A1CF	84	71.183	ENSPCAG00000006463	A1CF	70	80.274	Procavia_capensis
ENSMEUG00000015909	A1CF	100	88.121	ENSPCOG00000024172	A1CF	94	88.298	Propithecus_coquereli
ENSMEUG00000015909	A1CF	100	75.130	ENSPNYG00000017944	a1cf	94	76.684	Pundamilia_nyererei
ENSMEUG00000015909	A1CF	100	81.172	ENSPNAG00000007704	a1cf	94	81.172	Pygocentrus_nattereri
ENSMEUG00000015909	A1CF	100	86.847	ENSRNOG00000033195	A1cf	94	87.027	Rattus_norvegicus
ENSMEUG00000015909	A1CF	100	83.808	ENSRBIG00000042892	A1CF	100	90.220	Rhinopithecus_bieti
ENSMEUG00000015909	A1CF	100	91.667	ENSRROG00000041398	A1CF	99	91.848	Rhinopithecus_roxellana
ENSMEUG00000015909	A1CF	100	89.876	ENSSBOG00000021930	A1CF	100	90.476	Saimiri_boliviensis_boliviensis
ENSMEUG00000015909	A1CF	100	95.471	ENSSHAG00000005096	A1CF	94	95.471	Sarcophilus_harrisii
ENSMEUG00000015909	A1CF	100	80.249	ENSSFOG00015011774	a1cf	94	80.605	Scleropages_formosus
ENSMEUG00000015909	A1CF	100	74.138	ENSSMAG00000013271	a1cf	94	74.483	Scophthalmus_maximus
ENSMEUG00000015909	A1CF	100	75.088	ENSSDUG00000013930	a1cf	94	76.140	Seriola_dumerili
ENSMEUG00000015909	A1CF	100	69.735	ENSSLDG00000004290	a1cf	94	70.796	Seriola_lalandi_dorsalis
ENSMEUG00000015909	A1CF	100	79.820	ENSSARG00000005940	A1CF	95	80.180	Sorex_araneus
ENSMEUG00000015909	A1CF	100	85.689	ENSSPUG00000006797	A1CF	94	85.331	Sphenodon_punctatus
ENSMEUG00000015909	A1CF	100	88.988	ENSSSCG00000010431	A1CF	94	88.988	Sus_scrofa
ENSMEUG00000015909	A1CF	100	87.080	ENSTGUG00000005090	A1CF	94	86.903	Taeniopygia_guttata
ENSMEUG00000015909	A1CF	100	73.575	ENSTRUG00000001982	a1cf	94	73.575	Takifugu_rubripes
ENSMEUG00000015909	A1CF	100	74.182	ENSTNIG00000003580	a1cf	94	74.182	Tetraodon_nigroviridis
ENSMEUG00000015909	A1CF	100	85.225	ENSTTRG00000013190	A1CF	93	85.225	Tursiops_truncatus
ENSMEUG00000015909	A1CF	100	89.312	ENSUAMG00000020065	A1CF	94	89.493	Ursus_americanus
ENSMEUG00000015909	A1CF	100	88.351	ENSUMAG00000011162	A1CF	97	88.351	Ursus_maritimus
ENSMEUG00000015909	A1CF	92	86.576	ENSVPAG00000006130	A1CF	86	86.576	Vicugna_pacos
ENSMEUG00000015909	A1CF	100	90.018	ENSVVUG00000002504	A1CF	94	90.200	Vulpes_vulpes
ENSMEUG00000015909	A1CF	100	77.580	ENSXETG00000006611	a1cf	94	77.580	Xenopus_tropicalis
ENSMEUG00000015909	A1CF	100	77.113	ENSXCOG00000003302	a1cf	94	78.169	Xiphophorus_couchianus
ENSMEUG00000015909	A1CF	100	76.042	ENSXMAG00000016703	a1cf	94	77.083	Xiphophorus_maculatus