EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000016049 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 6843 bases
Position: chrGeneScaffold_4010:8752-15594
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000014663	PseudoU_synth_2	PF00849.22	3.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000016091	RPUSD1-201	900	-	ENSMEUP00000014663	299 (aa)	-	UPI0001B1F851

Gene Model

Click here to download ENSMEUG00000016049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000016049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000016049	RPUSD1	62	30.049	ENSMEUG00000004370	RPUSD4	52	30.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000016049	RPUSD1	100	67.308	ENSG00000007376	RPUSD1	100	77.381	Homo_sapiens
ENSMEUG00000016049	RPUSD1	98	60.586	ENSAPOG00000022221	rpusd1	98	60.586	Acanthochromis_polyacanthus
ENSMEUG00000016049	RPUSD1	100	72.277	ENSAMEG00000007461	RPUSD1	100	72.277	Ailuropoda_melanoleuca
ENSMEUG00000016049	RPUSD1	98	60.129	ENSACIG00000015863	rpusd1	98	61.238	Amphilophus_citrinellus
ENSMEUG00000016049	RPUSD1	98	61.842	ENSAOCG00000021975	rpusd1	95	61.613	Amphiprion_ocellaris
ENSMEUG00000016049	RPUSD1	98	62.171	ENSAPEG00000001316	rpusd1	95	61.935	Amphiprion_percula
ENSMEUG00000016049	RPUSD1	98	62.500	ENSATEG00000002984	rpusd1	98	62.829	Anabas_testudineus
ENSMEUG00000016049	RPUSD1	77	65.833	ENSAPLG00000012316	RPUSD1	99	65.833	Anas_platyrhynchos
ENSMEUG00000016049	RPUSD1	99	74.333	ENSACAG00000008953	RPUSD1	100	74.333	Anolis_carolinensis
ENSMEUG00000016049	RPUSD1	100	68.790	ENSANAG00000024709	RPUSD1	100	69.551	Aotus_nancymaae
ENSMEUG00000016049	RPUSD1	98	60.703	ENSACLG00000013692	rpusd1	98	62.092	Astatotilapia_calliptera
ENSMEUG00000016049	RPUSD1	99	60.269	ENSAMXG00000019802	rpusd1	100	60.269	Astyanax_mexicanus
ENSMEUG00000016049	RPUSD1	100	69.481	ENSBTAG00000000179	RPUSD1	100	70.096	Bos_taurus
ENSMEUG00000016049	RPUSD1	100	67.949	ENSCJAG00000012253	RPUSD1	100	69.872	Callithrix_jacchus
ENSMEUG00000016049	RPUSD1	100	70.957	ENSCAFG00000019614	RPUSD1	100	70.957	Canis_familiaris
ENSMEUG00000016049	RPUSD1	100	70.957	ENSCAFG00020008891	RPUSD1	100	70.957	Canis_lupus_dingo
ENSMEUG00000016049	RPUSD1	100	70.130	ENSCHIG00000012872	RPUSD1	100	71.061	Capra_hircus
ENSMEUG00000016049	RPUSD1	100	68.301	ENSTSYG00000036934	RPUSD1	100	68.301	Carlito_syrichta
ENSMEUG00000016049	RPUSD1	100	69.775	ENSCAPG00000014219	RPUSD1	100	69.775	Cavia_aperea
ENSMEUG00000016049	RPUSD1	100	69.775	ENSCPOG00000034604	RPUSD1	100	69.775	Cavia_porcellus
ENSMEUG00000016049	RPUSD1	100	69.108	ENSCCAG00000034385	RPUSD1	100	69.872	Cebus_capucinus
ENSMEUG00000016049	RPUSD1	100	67.949	ENSCATG00000042983	RPUSD1	100	69.231	Cercocebus_atys
ENSMEUG00000016049	RPUSD1	100	68.182	ENSCLAG00000013966	RPUSD1	100	68.489	Chinchilla_lanigera
ENSMEUG00000016049	RPUSD1	100	67.628	ENSCSAG00000012121	RPUSD1	100	68.910	Chlorocebus_sabaeus
ENSMEUG00000016049	RPUSD1	99	72.848	ENSCPBG00000021101	RPUSD1	99	72.848	Chrysemys_picta_bellii
ENSMEUG00000016049	RPUSD1	89	74.074	ENSCANG00000028576	RPUSD1	96	74.074	Colobus_angolensis_palliatus
ENSMEUG00000016049	RPUSD1	100	70.455	ENSCGRG00001014253	Rpusd1	100	70.455	Cricetulus_griseus_chok1gshd
ENSMEUG00000016049	RPUSD1	100	70.455	ENSCGRG00000017995	Rpusd1	100	70.455	Cricetulus_griseus_crigri
ENSMEUG00000016049	RPUSD1	99	62.290	ENSCSEG00000018512	rpusd1	100	62.290	Cynoglossus_semilaevis
ENSMEUG00000016049	RPUSD1	98	62.542	ENSCVAG00000022746	rpusd1	98	62.542	Cyprinodon_variegatus
ENSMEUG00000016049	RPUSD1	99	66.013	ENSDARG00000060192	rpusd1	100	66.013	Danio_rerio
ENSMEUG00000016049	RPUSD1	100	67.857	ENSDNOG00000003721	RPUSD1	100	69.156	Dasypus_novemcinctus
ENSMEUG00000016049	RPUSD1	100	71.287	ENSDORG00000026656	Rpusd1	100	71.287	Dipodomys_ordii
ENSMEUG00000016049	RPUSD1	97	47.003	ENSEBUG00000008767	rpusd1	93	47.003	Eptatretus_burgeri
ENSMEUG00000016049	RPUSD1	100	68.038	ENSEASG00005018421	RPUSD1	76	68.987	Equus_asinus_asinus
ENSMEUG00000016049	RPUSD1	98	58.224	ENSELUG00000014307	rpusd1	88	59.016	Esox_lucius
ENSMEUG00000016049	RPUSD1	100	70.957	ENSFCAG00000010359	RPUSD1	100	70.957	Felis_catus
ENSMEUG00000016049	RPUSD1	99	76.000	ENSFALG00000003211	RPUSD1	100	76.000	Ficedula_albicollis
ENSMEUG00000016049	RPUSD1	100	68.489	ENSFDAG00000013398	RPUSD1	100	68.489	Fukomys_damarensis
ENSMEUG00000016049	RPUSD1	98	59.416	ENSFHEG00000004736	rpusd1	98	60.927	Fundulus_heteroclitus
ENSMEUG00000016049	RPUSD1	99	59.283	ENSGMOG00000010756	rpusd1	99	59.283	Gadus_morhua
ENSMEUG00000016049	RPUSD1	99	73.597	ENSGALG00000005315	RPUSD1	100	73.597	Gallus_gallus
ENSMEUG00000016049	RPUSD1	98	61.538	ENSGAFG00000009886	rpusd1	98	61.538	Gambusia_affinis
ENSMEUG00000016049	RPUSD1	97	61.667	ENSGACG00000014276	rpusd1	97	61.258	Gasterosteus_aculeatus
ENSMEUG00000016049	RPUSD1	99	73.841	ENSGAGG00000004181	RPUSD1	99	73.841	Gopherus_agassizii
ENSMEUG00000016049	RPUSD1	100	67.628	ENSGGOG00000013997	RPUSD1	100	68.590	Gorilla_gorilla
ENSMEUG00000016049	RPUSD1	98	60.383	ENSHBUG00000023728	rpusd1	98	61.765	Haplochromis_burtoni
ENSMEUG00000016049	RPUSD1	100	67.857	ENSHGLG00000002595	RPUSD1	100	69.132	Heterocephalus_glaber_female
ENSMEUG00000016049	RPUSD1	100	67.857	ENSHGLG00100014303	RPUSD1	100	69.132	Heterocephalus_glaber_male
ENSMEUG00000016049	RPUSD1	98	63.051	ENSHCOG00000002390	rpusd1	99	63.051	Hippocampus_comes
ENSMEUG00000016049	RPUSD1	99	63.455	ENSIPUG00000001570	rpusd1	99	63.455	Ictalurus_punctatus
ENSMEUG00000016049	RPUSD1	100	70.740	ENSSTOG00000004276	RPUSD1	100	70.740	Ictidomys_tridecemlineatus
ENSMEUG00000016049	RPUSD1	100	69.079	ENSJJAG00000015696	Rpusd1	100	69.579	Jaculus_jaculus
ENSMEUG00000016049	RPUSD1	98	62.542	ENSKMAG00000017287	rpusd1	98	62.542	Kryptolebias_marmoratus
ENSMEUG00000016049	RPUSD1	98	60.645	ENSLBEG00000013354	RPUSD1	98	62.171	Labrus_bergylta
ENSMEUG00000016049	RPUSD1	98	60.645	ENSLBEG00000022502	rpusd1	98	62.171	Labrus_bergylta
ENSMEUG00000016049	RPUSD1	99	70.000	ENSLACG00000008869	RPUSD1	99	70.000	Latimeria_chalumnae
ENSMEUG00000016049	RPUSD1	71	78.505	ENSLOCG00000005682	rpusd1	99	78.505	Lepisosteus_oculatus
ENSMEUG00000016049	RPUSD1	100	70.066	ENSLAFG00000002115	RPUSD1	100	70.066	Loxodonta_africana
ENSMEUG00000016049	RPUSD1	100	68.269	ENSMFAG00000003961	RPUSD1	100	69.231	Macaca_fascicularis
ENSMEUG00000016049	RPUSD1	100	68.269	ENSMMUG00000000842	RPUSD1	100	69.231	Macaca_mulatta
ENSMEUG00000016049	RPUSD1	100	68.269	ENSMNEG00000042712	RPUSD1	100	69.231	Macaca_nemestrina
ENSMEUG00000016049	RPUSD1	100	68.269	ENSMLEG00000030591	RPUSD1	100	69.231	Mandrillus_leucophaeus
ENSMEUG00000016049	RPUSD1	98	62.058	ENSMAMG00000004735	rpusd1	98	62.058	Mastacembelus_armatus
ENSMEUG00000016049	RPUSD1	98	60.703	ENSMZEG00005003214	rpusd1	98	62.092	Maylandia_zebra
ENSMEUG00000016049	RPUSD1	97	73.490	ENSMGAG00000005447	RPUSD1	99	73.490	Meleagris_gallopavo
ENSMEUG00000016049	RPUSD1	86	68.702	ENSMAUG00000019998	Rpusd1	100	68.702	Mesocricetus_auratus
ENSMEUG00000016049	RPUSD1	100	68.730	ENSMICG00000017561	RPUSD1	100	70.358	Microcebus_murinus
ENSMEUG00000016049	RPUSD1	100	70.588	ENSMOCG00000014082	Rpusd1	100	70.096	Microtus_ochrogaster
ENSMEUG00000016049	RPUSD1	98	61.017	ENSMMOG00000012569	rpusd1	99	62.034	Mola_mola
ENSMEUG00000016049	RPUSD1	100	85.993	ENSMODG00000016882	RPUSD1	100	86.319	Monodelphis_domestica
ENSMEUG00000016049	RPUSD1	98	60.772	ENSMALG00000017818	rpusd1	98	61.967	Monopterus_albus
ENSMEUG00000016049	RPUSD1	100	71.569	MGP_CAROLIEiJ_G0021244	Rpusd1	100	71.061	Mus_caroli
ENSMEUG00000016049	RPUSD1	100	71.242	ENSMUSG00000041199	Rpusd1	100	70.740	Mus_musculus
ENSMEUG00000016049	RPUSD1	100	70.455	MGP_PahariEiJ_G0023562	Rpusd1	100	69.968	Mus_pahari
ENSMEUG00000016049	RPUSD1	100	71.242	MGP_SPRETEiJ_G0022155	Rpusd1	100	70.740	Mus_spretus
ENSMEUG00000016049	RPUSD1	100	67.846	ENSMPUG00000015897	RPUSD1	100	69.637	Mustela_putorius_furo
ENSMEUG00000016049	RPUSD1	100	68.269	ENSMLUG00000001089	RPUSD1	100	70.096	Myotis_lucifugus
ENSMEUG00000016049	RPUSD1	100	70.261	ENSNGAG00000003595	Rpusd1	100	70.418	Nannospalax_galili
ENSMEUG00000016049	RPUSD1	98	59.677	ENSNBRG00000006457	rpusd1	98	63.051	Neolamprologus_brichardi
ENSMEUG00000016049	RPUSD1	54	58.857	ENSNLEG00000008424	-	100	61.143	Nomascus_leucogenys
ENSMEUG00000016049	RPUSD1	99	64.784	ENSOPRG00000008340	RPUSD1	99	64.784	Ochotona_princeps
ENSMEUG00000016049	RPUSD1	100	68.489	ENSODEG00000016945	RPUSD1	100	68.489	Octodon_degus
ENSMEUG00000016049	RPUSD1	98	59.807	ENSONIG00000015672	rpusd1	99	61.639	Oreochromis_niloticus
ENSMEUG00000016049	RPUSD1	99	63.000	ENSORLG00000013009	rpusd1	99	63.000	Oryzias_latipes
ENSMEUG00000016049	RPUSD1	99	62.333	ENSORLG00020010382	rpusd1	99	62.333	Oryzias_latipes_hni
ENSMEUG00000016049	RPUSD1	99	61.667	ENSORLG00015021354	rpusd1	99	61.667	Oryzias_latipes_hsok
ENSMEUG00000016049	RPUSD1	98	62.081	ENSOMEG00000021426	rpusd1	98	62.081	Oryzias_melastigma
ENSMEUG00000016049	RPUSD1	100	68.471	ENSOGAG00000003795	RPUSD1	100	70.192	Otolemur_garnettii
ENSMEUG00000016049	RPUSD1	100	70.455	ENSOARG00000014254	RPUSD1	100	71.061	Ovis_aries
ENSMEUG00000016049	RPUSD1	100	66.987	ENSPPAG00000034797	RPUSD1	100	67.949	Pan_paniscus
ENSMEUG00000016049	RPUSD1	100	71.053	ENSPPRG00000012389	RPUSD1	100	71.053	Panthera_pardus
ENSMEUG00000016049	RPUSD1	100	71.053	ENSPTIG00000008545	RPUSD1	92	71.053	Panthera_tigris_altaica
ENSMEUG00000016049	RPUSD1	100	66.987	ENSPTRG00000007565	RPUSD1	100	67.949	Pan_troglodytes
ENSMEUG00000016049	RPUSD1	100	67.949	ENSPANG00000024401	RPUSD1	100	68.910	Papio_anubis
ENSMEUG00000016049	RPUSD1	99	66.225	ENSPKIG00000018890	rpusd1	91	66.225	Paramormyrops_kingsleyae
ENSMEUG00000016049	RPUSD1	99	73.927	ENSPSIG00000013945	RPUSD1	100	73.927	Pelodiscus_sinensis
ENSMEUG00000016049	RPUSD1	97	63.014	ENSPMGG00000014950	rpusd1	97	63.014	Periophthalmus_magnuspinnatus
ENSMEUG00000016049	RPUSD1	100	70.915	ENSPEMG00000000497	Rpusd1	100	70.740	Peromyscus_maniculatus_bairdii
ENSMEUG00000016049	RPUSD1	79	60.759	ENSPMAG00000001563	rpusd1	99	52.318	Petromyzon_marinus
ENSMEUG00000016049	RPUSD1	100	89.769	ENSPCIG00000021216	-	94	89.769	Phascolarctos_cinereus
ENSMEUG00000016049	RPUSD1	98	62.752	ENSPFOG00000007946	rpusd1	98	62.752	Poecilia_formosa
ENSMEUG00000016049	RPUSD1	98	62.752	ENSPLAG00000011925	rpusd1	98	62.752	Poecilia_latipinna
ENSMEUG00000016049	RPUSD1	98	62.416	ENSPMEG00000002910	rpusd1	98	62.416	Poecilia_mexicana
ENSMEUG00000016049	RPUSD1	98	61.873	ENSPREG00000019851	rpusd1	98	61.873	Poecilia_reticulata
ENSMEUG00000016049	RPUSD1	100	56.863	ENSPCAG00000002258	RPUSD1	100	56.863	Procavia_capensis
ENSMEUG00000016049	RPUSD1	100	68.038	ENSPCOG00000022582	RPUSD1	100	69.551	Propithecus_coquereli
ENSMEUG00000016049	RPUSD1	100	67.308	ENSPVAG00000013104	RPUSD1	100	68.269	Pteropus_vampyrus
ENSMEUG00000016049	RPUSD1	98	63.946	ENSPNYG00000024076	rpusd1	98	64.746	Pundamilia_nyererei
ENSMEUG00000016049	RPUSD1	99	61.074	ENSPNAG00000013806	rpusd1	100	61.074	Pygocentrus_nattereri
ENSMEUG00000016049	RPUSD1	100	70.915	ENSRNOG00000023639	Rpusd1	100	70.418	Rattus_norvegicus
ENSMEUG00000016049	RPUSD1	100	68.269	ENSRBIG00000030238	RPUSD1	100	69.231	Rhinopithecus_bieti
ENSMEUG00000016049	RPUSD1	100	68.269	ENSRROG00000036663	RPUSD1	100	69.231	Rhinopithecus_roxellana
ENSMEUG00000016049	RPUSD1	100	69.967	ENSSBOG00000033063	RPUSD1	100	70.724	Saimiri_boliviensis_boliviensis
ENSMEUG00000016049	RPUSD1	100	89.439	ENSSHAG00000013500	RPUSD1	100	89.439	Sarcophilus_harrisii
ENSMEUG00000016049	RPUSD1	99	67.559	ENSSFOG00015014394	rpusd1	99	67.559	Scleropages_formosus
ENSMEUG00000016049	RPUSD1	98	61.184	ENSSMAG00000008045	rpusd1	91	60.784	Scophthalmus_maximus
ENSMEUG00000016049	RPUSD1	85	69.531	ENSSDUG00000001829	rpusd1	95	62.829	Seriola_dumerili
ENSMEUG00000016049	RPUSD1	85	69.531	ENSSLDG00000020853	rpusd1	95	62.829	Seriola_lalandi_dorsalis
ENSMEUG00000016049	RPUSD1	55	79.042	ENSSARG00000011187	-	100	79.042	Sorex_araneus
ENSMEUG00000016049	RPUSD1	62	63.158	ENSSPUG00000005119	-	100	63.158	Sphenodon_punctatus
ENSMEUG00000016049	RPUSD1	98	61.184	ENSSPAG00000012708	rpusd1	98	61.184	Stegastes_partitus
ENSMEUG00000016049	RPUSD1	100	68.790	ENSSSCG00000008000	RPUSD1	98	75.984	Sus_scrofa
ENSMEUG00000016049	RPUSD1	84	81.423	ENSTGUG00000015375	RPUSD1	100	81.423	Taeniopygia_guttata
ENSMEUG00000016049	RPUSD1	98	60.197	ENSTRUG00000003041	rpusd1	98	60.197	Takifugu_rubripes
ENSMEUG00000016049	RPUSD1	98	58.503	ENSTNIG00000002660	rpusd1	99	58.503	Tetraodon_nigroviridis
ENSMEUG00000016049	RPUSD1	100	69.551	ENSTTRG00000010167	RPUSD1	100	70.513	Tursiops_truncatus
ENSMEUG00000016049	RPUSD1	100	71.617	ENSUAMG00000012736	RPUSD1	100	71.617	Ursus_americanus
ENSMEUG00000016049	RPUSD1	100	71.947	ENSUMAG00000021174	RPUSD1	100	71.947	Ursus_maritimus
ENSMEUG00000016049	RPUSD1	100	70.627	ENSVVUG00000012357	RPUSD1	100	70.627	Vulpes_vulpes
ENSMEUG00000016049	RPUSD1	100	68.078	ENSXETG00000007184	rpusd1	100	68.078	Xenopus_tropicalis
ENSMEUG00000016049	RPUSD1	98	61.538	ENSXCOG00000017930	rpusd1	98	61.538	Xiphophorus_couchianus
ENSMEUG00000016049	RPUSD1	98	61.538	ENSXMAG00000024084	rpusd1	98	61.538	Xiphophorus_maculatus