EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMEUG00000016293 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Notamacropus_eugenii
Status: putative
Strand: Minus strand
Length: 38156 bases
Position: chrGeneScaffold_1542:6715-44870
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMEUP00000014898	zf-C2H2	PF00096.26	9.7e-30	1	5
ENSMEUP00000014898	zf-C2H2	PF00096.26	9.7e-30	2	5
ENSMEUP00000014898	zf-C2H2	PF00096.26	9.7e-30	3	5
ENSMEUP00000014898	zf-C2H2	PF00096.26	9.7e-30	4	5
ENSMEUP00000014898	zf-C2H2	PF00096.26	9.7e-30	5	5
ENSMEUP00000014898	zf-met	PF12874.7	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMEUT00000016338	PATZ1-201	1398	-	ENSMEUP00000014898	465 (aa)	-	UPI0001B2133D

Gene Model

Click here to download ENSMEUG00000016293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMEUG00000016293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMEUG00000016293	PATZ1	50	35.417	ENSMEUG00000009510	SNAI2	53	35.417
ENSMEUG00000016293	PATZ1	78	35.366	ENSMEUG00000010447	ZNF774	69	32.941
ENSMEUG00000016293	PATZ1	79	31.884	ENSMEUG00000005903	-	60	31.441
ENSMEUG00000016293	PATZ1	74	32.308	ENSMEUG00000012147	ZNF628	64	33.728
ENSMEUG00000016293	PATZ1	56	39.344	ENSMEUG00000011922	OVOL2	51	39.344
ENSMEUG00000016293	PATZ1	94	31.330	ENSMEUG00000005611	-	75	31.330
ENSMEUG00000016293	PATZ1	73	32.314	ENSMEUG00000016725	-	100	30.612
ENSMEUG00000016293	PATZ1	71	35.838	ENSMEUG00000004196	-	71	35.838
ENSMEUG00000016293	PATZ1	50	37.066	ENSMEUG00000009482	MAZ	63	33.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMEUG00000016293	PATZ1	99	93.966	ENSG00000100105	PATZ1	68	93.978	Homo_sapiens
ENSMEUG00000016293	PATZ1	97	52.990	ENSAPOG00000018447	patz1	67	52.990	Acanthochromis_polyacanthus
ENSMEUG00000016293	PATZ1	99	94.181	ENSAMEG00000007074	PATZ1	68	94.194	Ailuropoda_melanoleuca
ENSMEUG00000016293	PATZ1	97	58.874	ENSACIG00000016779	patz1	73	64.725	Amphilophus_citrinellus
ENSMEUG00000016293	PATZ1	97	58.506	ENSAPEG00000013354	patz1	70	58.506	Amphiprion_percula
ENSMEUG00000016293	PATZ1	100	62.500	ENSATEG00000011260	patz1	69	58.316	Anabas_testudineus
ENSMEUG00000016293	PATZ1	100	92.903	ENSAPLG00000003934	PATZ1	81	92.903	Anas_platyrhynchos
ENSMEUG00000016293	PATZ1	99	93.966	ENSANAG00000029603	PATZ1	68	93.978	Aotus_nancymaae
ENSMEUG00000016293	PATZ1	93	66.775	ENSAMXG00000002273	patz1	63	66.775	Astyanax_mexicanus
ENSMEUG00000016293	PATZ1	99	93.966	ENSBTAG00000005478	PATZ1	68	93.978	Bos_taurus
ENSMEUG00000016293	PATZ1	99	93.966	ENSCJAG00000010978	PATZ1	68	93.978	Callithrix_jacchus
ENSMEUG00000016293	PATZ1	99	94.181	ENSCAFG00000013087	PATZ1	68	94.194	Canis_familiaris
ENSMEUG00000016293	PATZ1	99	93.534	ENSCHIG00000020203	PATZ1	68	93.548	Capra_hircus
ENSMEUG00000016293	PATZ1	99	94.397	ENSTSYG00000033183	PATZ1	68	94.409	Carlito_syrichta
ENSMEUG00000016293	PATZ1	99	93.966	ENSCCAG00000028772	PATZ1	68	93.978	Cebus_capucinus
ENSMEUG00000016293	PATZ1	99	94.181	ENSCATG00000006101	PATZ1	68	94.194	Cercocebus_atys
ENSMEUG00000016293	PATZ1	100	93.548	ENSCPBG00000011277	PATZ1	68	93.548	Chrysemys_picta_bellii
ENSMEUG00000016293	PATZ1	99	94.181	ENSCANG00000024972	PATZ1	68	94.194	Colobus_angolensis_palliatus
ENSMEUG00000016293	PATZ1	100	91.183	ENSCGRG00001004071	Patz1	67	91.183	Cricetulus_griseus_chok1gshd
ENSMEUG00000016293	PATZ1	100	93.333	ENSCGRG00000004814	Patz1	72	93.333	Cricetulus_griseus_crigri
ENSMEUG00000016293	PATZ1	100	56.584	ENSCSEG00000001385	patz1	71	56.619	Cynoglossus_semilaevis
ENSMEUG00000016293	PATZ1	96	57.783	ENSCVAG00000007684	patz1	68	58.209	Cyprinodon_variegatus
ENSMEUG00000016293	PATZ1	96	53.474	ENSDARG00000076584	patz1	74	52.941	Danio_rerio
ENSMEUG00000016293	PATZ1	85	93.939	ENSDNOG00000003183	PATZ1	64	93.955	Dasypus_novemcinctus
ENSMEUG00000016293	PATZ1	99	94.181	ENSDORG00000023834	Patz1	68	94.194	Dipodomys_ordii
ENSMEUG00000016293	PATZ1	99	93.966	ENSECAG00000025030	PATZ1	68	93.978	Equus_caballus
ENSMEUG00000016293	PATZ1	100	59.773	ENSELUG00000002333	patz1	65	59.773	Esox_lucius
ENSMEUG00000016293	PATZ1	99	94.181	ENSFCAG00000030253	PATZ1	68	94.194	Felis_catus
ENSMEUG00000016293	PATZ1	100	92.688	ENSFALG00000007450	PATZ1	79	92.688	Ficedula_albicollis
ENSMEUG00000016293	PATZ1	100	88.841	ENSFDAG00000005614	PATZ1	70	88.841	Fukomys_damarensis
ENSMEUG00000016293	PATZ1	100	56.531	ENSFHEG00000014755	patz1	68	56.531	Fundulus_heteroclitus
ENSMEUG00000016293	PATZ1	91	56.608	ENSGMOG00000001062	patz1	66	56.427	Gadus_morhua
ENSMEUG00000016293	PATZ1	100	92.473	ENSGALG00000006934	PATZ1	67	92.473	Gallus_gallus
ENSMEUG00000016293	PATZ1	100	52.834	ENSGAFG00000010053	patz1	74	63.312	Gambusia_affinis
ENSMEUG00000016293	PATZ1	100	93.548	ENSGAGG00000003214	PATZ1	80	93.548	Gopherus_agassizii
ENSMEUG00000016293	PATZ1	99	94.181	ENSGGOG00000017171	PATZ1	68	94.194	Gorilla_gorilla
ENSMEUG00000016293	PATZ1	99	51.639	ENSHCOG00000017644	patz1	62	51.639	Hippocampus_comes
ENSMEUG00000016293	PATZ1	96	53.975	ENSIPUG00000017653	patz1	73	61.094	Ictalurus_punctatus
ENSMEUG00000016293	PATZ1	99	94.181	ENSSTOG00000020707	PATZ1	68	94.194	Ictidomys_tridecemlineatus
ENSMEUG00000016293	PATZ1	99	92.672	ENSJJAG00000015259	Patz1	68	92.688	Jaculus_jaculus
ENSMEUG00000016293	PATZ1	100	57.143	ENSKMAG00000008157	patz1	68	57.500	Kryptolebias_marmoratus
ENSMEUG00000016293	PATZ1	100	93.548	ENSLAFG00000002317	PATZ1	69	93.548	Loxodonta_africana
ENSMEUG00000016293	PATZ1	99	94.181	ENSMFAG00000040968	PATZ1	68	94.194	Macaca_fascicularis
ENSMEUG00000016293	PATZ1	99	94.181	ENSMNEG00000037588	PATZ1	68	94.194	Macaca_nemestrina
ENSMEUG00000016293	PATZ1	99	94.181	ENSMLEG00000030938	PATZ1	68	94.194	Mandrillus_leucophaeus
ENSMEUG00000016293	PATZ1	97	56.151	ENSMAMG00000023652	patz1	71	56.151	Mastacembelus_armatus
ENSMEUG00000016293	PATZ1	100	92.473	ENSMGAG00000008439	PATZ1	83	92.473	Meleagris_gallopavo
ENSMEUG00000016293	PATZ1	100	93.763	ENSMAUG00000004129	Patz1	68	93.763	Mesocricetus_auratus
ENSMEUG00000016293	PATZ1	99	94.181	ENSMICG00000005430	PATZ1	68	94.194	Microcebus_murinus
ENSMEUG00000016293	PATZ1	100	93.763	ENSMOCG00000014488	Patz1	68	93.763	Microtus_ochrogaster
ENSMEUG00000016293	PATZ1	63	65.789	ENSMMOG00000021679	patz1	74	65.789	Mola_mola
ENSMEUG00000016293	PATZ1	91	61.086	ENSMALG00000021172	patz1	65	61.086	Monopterus_albus
ENSMEUG00000016293	PATZ1	100	93.548	MGP_CAROLIEiJ_G0016007	Patz1	68	93.548	Mus_caroli
ENSMEUG00000016293	PATZ1	100	93.548	ENSMUSG00000020453	Patz1	68	93.548	Mus_musculus
ENSMEUG00000016293	PATZ1	100	93.548	MGP_PahariEiJ_G0016884	Patz1	68	93.548	Mus_pahari
ENSMEUG00000016293	PATZ1	100	93.548	MGP_SPRETEiJ_G0016846	Patz1	68	93.548	Mus_spretus
ENSMEUG00000016293	PATZ1	99	93.966	ENSMLUG00000009942	PATZ1	68	93.978	Myotis_lucifugus
ENSMEUG00000016293	PATZ1	100	93.978	ENSNGAG00000010268	Patz1	68	93.978	Nannospalax_galili
ENSMEUG00000016293	PATZ1	97	59.322	ENSNBRG00000016032	patz1	77	61.176	Neolamprologus_brichardi
ENSMEUG00000016293	PATZ1	100	93.763	ENSODEG00000003589	PATZ1	68	93.763	Octodon_degus
ENSMEUG00000016293	PATZ1	100	52.305	ENSONIG00000004248	patz1	68	52.305	Oreochromis_niloticus
ENSMEUG00000016293	PATZ1	99	95.464	ENSOANG00000014654	PATZ1	68	95.484	Ornithorhynchus_anatinus
ENSMEUG00000016293	PATZ1	97	55.400	ENSORLG00020010937	patz1	71	55.400	Oryzias_latipes_hni
ENSMEUG00000016293	PATZ1	97	55.400	ENSORLG00015007396	patz1	71	55.400	Oryzias_latipes_hsok
ENSMEUG00000016293	PATZ1	91	54.867	ENSOMEG00000006636	patz1	72	67.114	Oryzias_melastigma
ENSMEUG00000016293	PATZ1	99	94.181	ENSOGAG00000027905	PATZ1	68	94.194	Otolemur_garnettii
ENSMEUG00000016293	PATZ1	99	94.181	ENSPPAG00000033227	PATZ1	68	94.194	Pan_paniscus
ENSMEUG00000016293	PATZ1	99	94.181	ENSPPRG00000001573	PATZ1	68	94.194	Panthera_pardus
ENSMEUG00000016293	PATZ1	99	94.181	ENSPTIG00000007937	PATZ1	71	94.194	Panthera_tigris_altaica
ENSMEUG00000016293	PATZ1	99	94.181	ENSPTRG00000014268	PATZ1	68	94.194	Pan_troglodytes
ENSMEUG00000016293	PATZ1	99	94.181	ENSPANG00000006821	PATZ1	68	94.194	Papio_anubis
ENSMEUG00000016293	PATZ1	100	61.364	ENSPKIG00000019584	patz1	74	60.563	Paramormyrops_kingsleyae
ENSMEUG00000016293	PATZ1	71	89.666	ENSPSIG00000016553	-	76	89.666	Pelodiscus_sinensis
ENSMEUG00000016293	PATZ1	85	94.949	ENSPSIG00000011562	-	100	94.949	Pelodiscus_sinensis
ENSMEUG00000016293	PATZ1	99	57.322	ENSPMGG00000010196	patz1	69	57.322	Periophthalmus_magnuspinnatus
ENSMEUG00000016293	PATZ1	100	93.978	ENSPEMG00000005321	Patz1	68	93.978	Peromyscus_maniculatus_bairdii
ENSMEUG00000016293	PATZ1	100	57.025	ENSPLAG00000010425	patz1	78	56.405	Poecilia_latipinna
ENSMEUG00000016293	PATZ1	100	52.834	ENSPMEG00000000255	patz1	73	54.167	Poecilia_mexicana
ENSMEUG00000016293	PATZ1	100	56.768	ENSPREG00000002440	patz1	70	56.162	Poecilia_reticulata
ENSMEUG00000016293	PATZ1	99	94.397	ENSPPYG00000011732	PATZ1	68	94.409	Pongo_abelii
ENSMEUG00000016293	PATZ1	99	94.181	ENSPCOG00000019729	PATZ1	68	94.194	Propithecus_coquereli
ENSMEUG00000016293	PATZ1	99	94.181	ENSPVAG00000001749	PATZ1	68	94.194	Pteropus_vampyrus
ENSMEUG00000016293	PATZ1	100	58.282	ENSPNYG00000013542	patz1	70	58.282	Pundamilia_nyererei
ENSMEUG00000016293	PATZ1	92	62.121	ENSPNAG00000017222	patz1	76	62.121	Pygocentrus_nattereri
ENSMEUG00000016293	PATZ1	99	94.181	ENSRBIG00000044231	PATZ1	68	94.194	Rhinopithecus_bieti
ENSMEUG00000016293	PATZ1	99	94.181	ENSRROG00000037155	PATZ1	68	94.194	Rhinopithecus_roxellana
ENSMEUG00000016293	PATZ1	99	93.966	ENSSBOG00000003894	PATZ1	68	93.978	Saimiri_boliviensis_boliviensis
ENSMEUG00000016293	PATZ1	84	80.788	ENSSFOG00015013244	patz1	59	80.788	Scleropages_formosus
ENSMEUG00000016293	PATZ1	100	92.903	ENSSPUG00000015298	PATZ1	66	92.903	Sphenodon_punctatus
ENSMEUG00000016293	PATZ1	99	94.181	ENSSSCG00000010027	PATZ1	80	94.194	Sus_scrofa
ENSMEUG00000016293	PATZ1	99	57.831	ENSTRUG00000015366	patz1	74	55.058	Takifugu_rubripes
ENSMEUG00000016293	PATZ1	99	94.181	ENSTTRG00000010279	PATZ1	68	94.194	Tursiops_truncatus
ENSMEUG00000016293	PATZ1	99	84.698	ENSUAMG00000015014	PATZ1	65	84.731	Ursus_americanus
ENSMEUG00000016293	PATZ1	99	76.190	ENSXETG00000004190	patz1	71	76.026	Xenopus_tropicalis
ENSMEUG00000016293	PATZ1	100	52.834	ENSXMAG00000015531	patz1	74	51.758	Xiphophorus_maculatus