EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000000347 (Gene tree)
Gene ID: 102127962
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 49162 bases
Position: chr8:99271717-99320878
Accession: 102127962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000045224	POP1	PF06978.11	3.5e-38	1	2
ENSMFAP00000045224	POP1	PF06978.11	3.5e-38	2	2
ENSMFAP00000045206	POP1	PF06978.11	3.8e-38	1	2
ENSMFAP00000045206	POP1	PF06978.11	3.8e-38	2	2
ENSMFAP00000045214	POP1	PF06978.11	3.8e-38	1	2
ENSMFAP00000045214	POP1	PF06978.11	3.8e-38	2	2
ENSMFAP00000045224	POPLD	PF08170.12	2.3e-27	1	1
ENSMFAP00000045206	POPLD	PF08170.12	2.4e-27	1	1
ENSMFAP00000045214	POPLD	PF08170.12	2.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000019518	POP1-202	6810	-	ENSMFAP00000045214	1024 (aa)	-	A0A2K5X6W8
ENSMFAT00000019510	POP1-201	4741	XM_005563773	ENSMFAP00000045206	1024 (aa)	XP_005563830	A0A2K5X6W8
ENSMFAT00000019528	POP1-203	2988	-	ENSMFAP00000045224	995 (aa)	-	A0A2K5X6X7

Gene Model

Click here to download ENSMFAG00000000347's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03008	Ribosome biogenesis in eukaryotes	KEGG
mcf03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000000347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000000347	POP1	100	96.582	ENSG00000104356	POP1	100	98.907	Homo_sapiens
ENSMFAG00000000347	POP1	100	47.887	ENSAPOG00000008198	pop1	100	47.793	Acanthochromis_polyacanthus
ENSMFAG00000000347	POP1	100	80.194	ENSAMEG00000000556	POP1	100	80.194	Ailuropoda_melanoleuca
ENSMFAG00000000347	POP1	90	49.045	ENSACIG00000004169	POP1	100	46.220	Amphilophus_citrinellus
ENSMFAG00000000347	POP1	100	47.225	ENSAOCG00000010991	pop1	100	47.264	Amphiprion_ocellaris
ENSMFAG00000000347	POP1	91	47.433	ENSAPEG00000007607	pop1	96	47.889	Amphiprion_percula
ENSMFAG00000000347	POP1	100	46.392	ENSATEG00000024814	POP1	100	46.321	Anabas_testudineus
ENSMFAG00000000347	POP1	92	63.064	ENSAPLG00000014418	POP1	100	62.854	Anas_platyrhynchos
ENSMFAG00000000347	POP1	100	56.551	ENSACAG00000016083	POP1	100	56.551	Anolis_carolinensis
ENSMFAG00000000347	POP1	93	94.362	ENSANAG00000026360	POP1	100	94.362	Aotus_nancymaae
ENSMFAG00000000347	POP1	93	53.134	ENSACLG00000010951	pop1	100	47.314	Astatotilapia_calliptera
ENSMFAG00000000347	POP1	100	45.513	ENSAMXG00000014483	POP1	100	45.120	Astyanax_mexicanus
ENSMFAG00000000347	POP1	100	80.859	ENSBTAG00000012596	POP1	100	80.859	Bos_taurus
ENSMFAG00000000347	POP1	100	92.578	ENSCJAG00000015567	POP1	100	92.578	Callithrix_jacchus
ENSMFAG00000000347	POP1	100	80.664	ENSCAFG00000000469	POP1	100	80.664	Canis_familiaris
ENSMFAG00000000347	POP1	100	81.836	ENSCAFG00020026765	POP1	100	81.836	Canis_lupus_dingo
ENSMFAG00000000347	POP1	100	80.976	ENSCHIG00000017066	POP1	100	80.976	Capra_hircus
ENSMFAG00000000347	POP1	100	85.547	ENSTSYG00000003097	POP1	100	85.547	Carlito_syrichta
ENSMFAG00000000347	POP1	100	77.551	ENSCAPG00000007251	POP1	100	77.551	Cavia_aperea
ENSMFAG00000000347	POP1	100	80.371	ENSCPOG00000002901	POP1	100	80.371	Cavia_porcellus
ENSMFAG00000000347	POP1	100	92.578	ENSCCAG00000018939	POP1	100	92.578	Cebus_capucinus
ENSMFAG00000000347	POP1	100	99.121	ENSCATG00000040916	POP1	100	99.121	Cercocebus_atys
ENSMFAG00000000347	POP1	100	82.129	ENSCLAG00000007208	POP1	97	82.129	Chinchilla_lanigera
ENSMFAG00000000347	POP1	90	98.373	ENSCSAG00000012340	POP1	99	98.373	Chlorocebus_sabaeus
ENSMFAG00000000347	POP1	95	79.713	ENSCHOG00000011432	POP1	100	79.713	Choloepus_hoffmanni
ENSMFAG00000000347	POP1	100	65.661	ENSCPBG00000006373	POP1	100	65.661	Chrysemys_picta_bellii
ENSMFAG00000000347	POP1	82	38.132	ENSCING00000008323	-	90	36.749	Ciona_intestinalis
ENSMFAG00000000347	POP1	100	98.242	ENSCANG00000001647	POP1	100	98.242	Colobus_angolensis_palliatus
ENSMFAG00000000347	POP1	100	76.683	ENSCGRG00001017308	Pop1	100	76.683	Cricetulus_griseus_chok1gshd
ENSMFAG00000000347	POP1	100	71.122	ENSCGRG00000010824	Pop1	100	71.122	Cricetulus_griseus_crigri
ENSMFAG00000000347	POP1	100	45.498	ENSCSEG00000008737	POP1	100	46.270	Cynoglossus_semilaevis
ENSMFAG00000000347	POP1	100	47.154	ENSCVAG00000022248	pop1	100	47.343	Cyprinodon_variegatus
ENSMFAG00000000347	POP1	100	77.663	ENSDNOG00000019974	POP1	100	77.663	Dasypus_novemcinctus
ENSMFAG00000000347	POP1	100	72.585	ENSDORG00000015384	Pop1	100	72.488	Dipodomys_ordii
ENSMFAG00000000347	POP1	61	32.911	FBgn0026702	l(1)G0045	78	30.728	Drosophila_melanogaster
ENSMFAG00000000347	POP1	84	78.205	ENSETEG00000007839	POP1	81	78.205	Echinops_telfairi
ENSMFAG00000000347	POP1	50	35.259	ENSEBUG00000014694	-	99	35.259	Eptatretus_burgeri
ENSMFAG00000000347	POP1	100	83.496	ENSEASG00005003189	POP1	98	83.496	Equus_asinus_asinus
ENSMFAG00000000347	POP1	100	83.301	ENSECAG00000024236	POP1	100	83.301	Equus_caballus
ENSMFAG00000000347	POP1	69	80.556	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSMFAG00000000347	POP1	100	47.098	ENSELUG00000003526	pop1	100	47.193	Esox_lucius
ENSMFAG00000000347	POP1	100	83.496	ENSFCAG00000002168	POP1	100	83.496	Felis_catus
ENSMFAG00000000347	POP1	100	60.445	ENSFALG00000005711	POP1	100	60.580	Ficedula_albicollis
ENSMFAG00000000347	POP1	100	82.617	ENSFDAG00000017068	POP1	100	82.617	Fukomys_damarensis
ENSMFAG00000000347	POP1	100	46.711	ENSFHEG00000019518	pop1	100	46.227	Fundulus_heteroclitus
ENSMFAG00000000347	POP1	93	45.381	ENSGMOG00000000659	POP1	98	45.888	Gadus_morhua
ENSMFAG00000000347	POP1	100	47.064	ENSGAFG00000019770	POP1	100	47.201	Gambusia_affinis
ENSMFAG00000000347	POP1	100	46.330	ENSGACG00000003499	pop1	100	46.330	Gasterosteus_aculeatus
ENSMFAG00000000347	POP1	100	64.341	ENSGAGG00000011737	POP1	98	64.535	Gopherus_agassizii
ENSMFAG00000000347	POP1	100	96.484	ENSGGOG00000003176	POP1	100	96.484	Gorilla_gorilla
ENSMFAG00000000347	POP1	100	46.992	ENSHBUG00000021583	pop1	100	46.748	Haplochromis_burtoni
ENSMFAG00000000347	POP1	100	81.543	ENSHGLG00000006029	POP1	100	81.543	Heterocephalus_glaber_female
ENSMFAG00000000347	POP1	100	81.543	ENSHGLG00100016879	POP1	100	81.543	Heterocephalus_glaber_male
ENSMFAG00000000347	POP1	90	49.521	ENSHCOG00000013888	pop1	96	49.359	Hippocampus_comes
ENSMFAG00000000347	POP1	100	45.197	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSMFAG00000000347	POP1	100	82.910	ENSSTOG00000011455	POP1	97	82.910	Ictidomys_tridecemlineatus
ENSMFAG00000000347	POP1	100	79.303	ENSJJAG00000013325	Pop1	100	79.303	Jaculus_jaculus
ENSMFAG00000000347	POP1	100	46.411	ENSKMAG00000001346	POP1	100	46.507	Kryptolebias_marmoratus
ENSMFAG00000000347	POP1	89	47.676	ENSLBEG00000024457	POP1	100	45.183	Labrus_bergylta
ENSMFAG00000000347	POP1	93	56.112	ENSLACG00000012498	POP1	99	56.212	Latimeria_chalumnae
ENSMFAG00000000347	POP1	100	51.338	ENSLOCG00000009817	POP1	100	51.533	Lepisosteus_oculatus
ENSMFAG00000000347	POP1	100	82.977	ENSLAFG00000010770	POP1	100	82.977	Loxodonta_africana
ENSMFAG00000000347	POP1	100	99.497	ENSMNEG00000036870	POP1	100	99.497	Macaca_nemestrina
ENSMFAG00000000347	POP1	100	99.512	ENSMLEG00000034986	POP1	100	99.512	Mandrillus_leucophaeus
ENSMFAG00000000347	POP1	100	46.591	ENSMAMG00000004040	pop1	100	46.686	Mastacembelus_armatus
ENSMFAG00000000347	POP1	100	47.368	ENSMZEG00005025448	pop1	100	47.314	Maylandia_zebra
ENSMFAG00000000347	POP1	100	58.025	ENSMGAG00000012167	POP1	100	58.657	Meleagris_gallopavo
ENSMFAG00000000347	POP1	100	76.390	ENSMAUG00000017537	Pop1	100	76.390	Mesocricetus_auratus
ENSMFAG00000000347	POP1	100	88.756	ENSMICG00000004361	POP1	100	86.621	Microcebus_murinus
ENSMFAG00000000347	POP1	100	75.293	ENSMOCG00000006356	Pop1	100	75.977	Microtus_ochrogaster
ENSMFAG00000000347	POP1	100	44.704	ENSMMOG00000018242	pop1	100	44.704	Mola_mola
ENSMFAG00000000347	POP1	100	69.603	ENSMODG00000006561	POP1	100	69.052	Monodelphis_domestica
ENSMFAG00000000347	POP1	93	51.560	ENSMALG00000012621	POP1	100	47.064	Monopterus_albus
ENSMFAG00000000347	POP1	100	76.562	MGP_CAROLIEiJ_G0019726	Pop1	100	76.562	Mus_caroli
ENSMFAG00000000347	POP1	100	76.953	ENSMUSG00000022325	Pop1	100	76.953	Mus_musculus
ENSMFAG00000000347	POP1	100	77.148	MGP_PahariEiJ_G0019735	Pop1	100	77.148	Mus_pahari
ENSMFAG00000000347	POP1	100	76.465	MGP_SPRETEiJ_G0020622	Pop1	100	76.465	Mus_spretus
ENSMFAG00000000347	POP1	100	81.907	ENSMPUG00000015250	POP1	100	80.929	Mustela_putorius_furo
ENSMFAG00000000347	POP1	100	77.875	ENSMLUG00000010204	POP1	100	77.973	Myotis_lucifugus
ENSMFAG00000000347	POP1	100	81.348	ENSNGAG00000001582	Pop1	100	81.348	Nannospalax_galili
ENSMFAG00000000347	POP1	82	55.207	ENSNBRG00000002356	pop1	93	55.357	Neolamprologus_brichardi
ENSMFAG00000000347	POP1	100	95.508	ENSNLEG00000002541	POP1	100	95.508	Nomascus_leucogenys
ENSMFAG00000000347	POP1	90	71.470	ENSMEUG00000003118	POP1	92	71.470	Notamacropus_eugenii
ENSMFAG00000000347	POP1	100	78.870	ENSOPRG00000007667	POP1	100	78.676	Ochotona_princeps
ENSMFAG00000000347	POP1	100	80.214	ENSODEG00000003984	POP1	100	80.214	Octodon_degus
ENSMFAG00000000347	POP1	100	48.292	ENSONIG00000016445	pop1	100	48.292	Oreochromis_niloticus
ENSMFAG00000000347	POP1	59	70.122	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSMFAG00000000347	POP1	100	81.633	ENSOCUG00000017400	POP1	100	81.633	Oryctolagus_cuniculus
ENSMFAG00000000347	POP1	100	47.368	ENSORLG00000002839	pop1	100	47.797	Oryzias_latipes
ENSMFAG00000000347	POP1	90	49.468	ENSORLG00020022450	POP1	96	49.104	Oryzias_latipes_hni
ENSMFAG00000000347	POP1	92	49.688	ENSORLG00015012746	POP1	100	47.893	Oryzias_latipes_hsok
ENSMFAG00000000347	POP1	100	47.008	ENSOMEG00000006915	pop1	99	47.059	Oryzias_melastigma
ENSMFAG00000000347	POP1	100	83.496	ENSOGAG00000001466	POP1	100	83.496	Otolemur_garnettii
ENSMFAG00000000347	POP1	100	96.680	ENSPPAG00000018410	POP1	100	96.680	Pan_paniscus
ENSMFAG00000000347	POP1	100	83.415	ENSPPRG00000005002	POP1	100	83.415	Panthera_pardus
ENSMFAG00000000347	POP1	100	83.805	ENSPTIG00000016527	POP1	100	83.805	Panthera_tigris_altaica
ENSMFAG00000000347	POP1	100	96.683	ENSPTRG00000020458	POP1	100	96.683	Pan_troglodytes
ENSMFAG00000000347	POP1	100	99.219	ENSPANG00000009704	POP1	100	99.219	Papio_anubis
ENSMFAG00000000347	POP1	100	49.042	ENSPKIG00000016325	POP1	100	48.946	Paramormyrops_kingsleyae
ENSMFAG00000000347	POP1	100	63.628	ENSPSIG00000012343	POP1	100	63.628	Pelodiscus_sinensis
ENSMFAG00000000347	POP1	90	49.246	ENSPMGG00000022253	POP1	95	49.091	Periophthalmus_magnuspinnatus
ENSMFAG00000000347	POP1	99	75.407	ENSPEMG00000023633	Pop1	100	75.407	Peromyscus_maniculatus_bairdii
ENSMFAG00000000347	POP1	90	43.823	ENSPMAG00000003209	POP1	100	44.245	Petromyzon_marinus
ENSMFAG00000000347	POP1	100	68.142	ENSPCIG00000012216	POP1	100	68.142	Phascolarctos_cinereus
ENSMFAG00000000347	POP1	100	48.752	ENSPFOG00000012490	POP1	100	48.233	Poecilia_formosa
ENSMFAG00000000347	POP1	100	48.607	ENSPLAG00000004646	POP1	100	48.088	Poecilia_latipinna
ENSMFAG00000000347	POP1	100	48.755	ENSPMEG00000019592	POP1	100	47.901	Poecilia_mexicana
ENSMFAG00000000347	POP1	100	48.464	ENSPREG00000020951	POP1	100	48.464	Poecilia_reticulata
ENSMFAG00000000347	POP1	100	95.996	ENSPPYG00000018777	POP1	100	95.996	Pongo_abelii
ENSMFAG00000000347	POP1	100	76.488	ENSPCAG00000016662	POP1	100	76.098	Procavia_capensis
ENSMFAG00000000347	POP1	100	86.914	ENSPCOG00000019420	POP1	100	86.914	Propithecus_coquereli
ENSMFAG00000000347	POP1	100	81.756	ENSPVAG00000014468	POP1	100	81.756	Pteropus_vampyrus
ENSMFAG00000000347	POP1	89	48.283	ENSPNYG00000004476	pop1	95	48.456	Pundamilia_nyererei
ENSMFAG00000000347	POP1	100	45.746	ENSPNAG00000000265	pop1	100	44.099	Pygocentrus_nattereri
ENSMFAG00000000347	POP1	100	77.637	ENSRNOG00000005243	Pop1	100	77.637	Rattus_norvegicus
ENSMFAG00000000347	POP1	100	97.852	ENSRBIG00000007996	POP1	100	97.852	Rhinopithecus_bieti
ENSMFAG00000000347	POP1	100	98.047	ENSRROG00000012334	POP1	100	98.047	Rhinopithecus_roxellana
ENSMFAG00000000347	POP1	99	93.577	ENSSBOG00000020830	POP1	100	93.577	Saimiri_boliviensis_boliviensis
ENSMFAG00000000347	POP1	100	68.635	ENSSHAG00000000296	POP1	100	68.635	Sarcophilus_harrisii
ENSMFAG00000000347	POP1	100	46.507	ENSSFOG00015007429	pop1	99	46.235	Scleropages_formosus
ENSMFAG00000000347	POP1	86	52.986	ENSSMAG00000010467	POP1	98	53.599	Scophthalmus_maximus
ENSMFAG00000000347	POP1	100	46.786	ENSSDUG00000007817	POP1	100	46.987	Seriola_dumerili
ENSMFAG00000000347	POP1	100	46.704	ENSSLDG00000012565	POP1	100	47.175	Seriola_lalandi_dorsalis
ENSMFAG00000000347	POP1	100	59.651	ENSSPUG00000003550	-	100	59.748	Sphenodon_punctatus
ENSMFAG00000000347	POP1	100	47.150	ENSSPAG00000014955	pop1	100	46.763	Stegastes_partitus
ENSMFAG00000000347	POP1	100	81.543	ENSSSCG00000006078	POP1	100	81.543	Sus_scrofa
ENSMFAG00000000347	POP1	92	57.505	ENSTGUG00000012011	-	100	57.505	Taeniopygia_guttata
ENSMFAG00000000347	POP1	91	47.945	ENSTRUG00000010856	pop1	94	47.945	Takifugu_rubripes
ENSMFAG00000000347	POP1	93	47.959	ENSTNIG00000013297	pop1	99	47.959	Tetraodon_nigroviridis
ENSMFAG00000000347	POP1	95	80.450	ENSTBEG00000014214	POP1	100	80.450	Tupaia_belangeri
ENSMFAG00000000347	POP1	100	80.273	ENSTTRG00000016071	POP1	100	80.273	Tursiops_truncatus
ENSMFAG00000000347	POP1	99	78.480	ENSUAMG00000017309	POP1	100	78.480	Ursus_americanus
ENSMFAG00000000347	POP1	92	89.879	ENSUMAG00000016952	POP1	100	89.879	Ursus_maritimus
ENSMFAG00000000347	POP1	82	87.956	ENSVPAG00000008278	POP1	82	87.956	Vicugna_pacos
ENSMFAG00000000347	POP1	100	81.934	ENSVVUG00000010994	POP1	100	81.934	Vulpes_vulpes
ENSMFAG00000000347	POP1	100	42.654	ENSXCOG00000017043	POP1	100	42.912	Xiphophorus_couchianus
ENSMFAG00000000347	POP1	100	46.800	ENSXMAG00000002472	POP1	100	46.800	Xiphophorus_maculatus