EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMFAG00000001339 (Gene tree)
Gene ID
101866893
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Macaca_fascicularis
Status
putative
Strand
Minus strand
Length
51544 bases
Position
chr13:101538036-101589579
Accession
101866893
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMFAP00000008233CPSF73-100_CPF11718.81.4e-5411
ENSMFAP00000008244CPSF73-100_CPF11718.81.5e-5411
ENSMFAP00000008221Beta-CaspPF10996.85.3e-3411
ENSMFAP00000008233Beta-CaspPF10996.87.2e-3411
ENSMFAP00000008244Beta-CaspPF10996.87.9e-3411
ENSMFAP00000008221Lactamase_BPF00753.271.1e-1811
ENSMFAP00000008244Lactamase_BPF00753.271.8e-1811
ENSMFAP00000008233Lactamase_BPF00753.278.9e-1511
ENSMFAP00000008221RMMBLPF07521.121.7e-2111
ENSMFAP00000008233RMMBLPF07521.121.9e-2111
ENSMFAP00000008244RMMBLPF07521.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMFAT00000021830-1533-ENSMFAP00000008221510 (aa)-A0A2K5U7C1
ENSMFAT00000021812-2271XM_015433425ENSMFAP00000008244684 (aa)XP_015288911Q4R7A0
ENSMFAT00000021820-1947XM_015433426ENSMFAP00000008233648 (aa)XP_015288912A0A2K5U795
Gene Model
Click here to download ENSMFAG00000001339's gene model file
Pathways
Pathway IDPathway NameSource
mcf03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000001339's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMFAG00000001339CPSF38740.220ENSMFAG00000044583INTS118141.202
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMFAG00000001339CPSF310099.708ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMFAG00000001339CPSF39495.208ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSMFAG00000001339CPSF39493.750ENSAPOG00000022087cpsf39885.272Acanthochromis_polyacanthus
ENSMFAG00000001339CPSF310099.415ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSMFAG00000001339CPSF39786.349ENSACIG00000023663CPSF39986.349Amphilophus_citrinellus
ENSMFAG00000001339CPSF39782.643ENSACIG00000009846cpsf39982.643Amphilophus_citrinellus
ENSMFAG00000001339CPSF39495.208ENSAOCG00000010077CPSF39887.794Amphiprion_ocellaris
ENSMFAG00000001339CPSF39493.750ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSMFAG00000001339CPSF39493.750ENSAPEG00000019526cpsf39786.574Amphiprion_percula
ENSMFAG00000001339CPSF39495.208ENSAPEG00000021167CPSF39887.794Amphiprion_percula
ENSMFAG00000001339CPSF39495.208ENSATEG00000014525CPSF39883.088Anabas_testudineus
ENSMFAG00000001339CPSF39493.763ENSATEG00000003959cpsf39885.272Anabas_testudineus
ENSMFAG00000001339CPSF39995.511ENSAPLG00000006941CPSF39895.238Anas_platyrhynchos
ENSMFAG00000001339CPSF39892.913ENSACAG00000001759CPSF39992.913Anolis_carolinensis
ENSMFAG00000001339CPSF310093.129ENSANAG00000031254CPSF310093.129Aotus_nancymaae
ENSMFAG00000001339CPSF39786.190ENSACLG00000018846CPSF39986.190Astatotilapia_calliptera
ENSMFAG00000001339CPSF39193.991ENSACLG00000014484cpsf39985.564Astatotilapia_calliptera
ENSMFAG00000001339CPSF39495.208ENSAMXG00000004786cpsf39888.088Astyanax_mexicanus
ENSMFAG00000001339CPSF310099.561ENSBTAG00000019735CPSF310099.561Bos_taurus
ENSMFAG00000001339CPSF39466.667WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSMFAG00000001339CPSF310099.708ENSCJAG00000006276CPSF310099.708Callithrix_jacchus
ENSMFAG00000001339CPSF310099.415ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSMFAG00000001339CPSF39596.687ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSMFAG00000001339CPSF310099.561ENSCHIG00000013973CPSF310099.561Capra_hircus
ENSMFAG00000001339CPSF310099.708ENSTSYG00000002967CPSF310099.708Carlito_syrichta
ENSMFAG00000001339CPSF39997.678ENSCAPG00000013851CPSF310097.751Cavia_aperea
ENSMFAG00000001339CPSF310097.807ENSCPOG00000011299CPSF310097.807Cavia_porcellus
ENSMFAG00000001339CPSF310099.854ENSCCAG00000036730CPSF310099.854Cebus_capucinus
ENSMFAG00000001339CPSF310099.608ENSCATG00000014770CPSF310099.608Cercocebus_atys
ENSMFAG00000001339CPSF310097.368ENSCLAG00000002727CPSF310097.368Chinchilla_lanigera
ENSMFAG00000001339CPSF310092.251ENSCSAG00000007125CPSF310092.251Chlorocebus_sabaeus
ENSMFAG00000001339CPSF386100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSMFAG00000001339CPSF39995.504ENSCPBG00000014074CPSF39995.455Chrysemys_picta_bellii
ENSMFAG00000001339CPSF39875.351ENSCING00000007214-9868.129Ciona_intestinalis
ENSMFAG00000001339CPSF310086.550ENSCANG00000034435CPSF310086.550Colobus_angolensis_palliatus
ENSMFAG00000001339CPSF310098.830ENSCGRG00001013134Cpsf310098.830Cricetulus_griseus_chok1gshd
ENSMFAG00000001339CPSF310098.830ENSCGRG00000018319Cpsf310098.830Cricetulus_griseus_crigri
ENSMFAG00000001339CPSF39494.167ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSMFAG00000001339CPSF39495.000ENSCVAG00000015067CPSF39888.088Cyprinodon_variegatus
ENSMFAG00000001339CPSF39495.417ENSDARG00000027649cpsf39888.824Danio_rerio
ENSMFAG00000001339CPSF310097.664ENSDNOG00000008940CPSF39597.664Dasypus_novemcinctus
ENSMFAG00000001339CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSMFAG00000001339CPSF39876.200FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSMFAG00000001339CPSF39588.091ENSETEG00000003893CPSF310085.561Echinops_telfairi
ENSMFAG00000001339CPSF39887.174ENSEBUG00000009018cpsf39878.940Eptatretus_burgeri
ENSMFAG00000001339CPSF310099.415ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSMFAG00000001339CPSF310099.415ENSECAG00000019911CPSF310099.415Equus_caballus
ENSMFAG00000001339CPSF310083.918ENSEEUG00000015422CPSF310083.918Erinaceus_europaeus
ENSMFAG00000001339CPSF39494.387ENSELUG00000013775cpsf39887.941Esox_lucius
ENSMFAG00000001339CPSF310099.561ENSFCAG00000007852CPSF310099.561Felis_catus
ENSMFAG00000001339CPSF39995.201ENSFALG00000006572CPSF310095.209Ficedula_albicollis
ENSMFAG00000001339CPSF39997.214ENSFDAG00000006317CPSF39997.214Fukomys_damarensis
ENSMFAG00000001339CPSF36368.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSMFAG00000001339CPSF39492.917ENSFHEG00000014774cpsf39884.978Fundulus_heteroclitus
ENSMFAG00000001339CPSF39493.347ENSGMOG00000003157cpsf39886.471Gadus_morhua
ENSMFAG00000001339CPSF39995.007ENSGALG00000016424CPSF39995.007Gallus_gallus
ENSMFAG00000001339CPSF39495.010ENSGAFG00000008016CPSF39887.923Gambusia_affinis
ENSMFAG00000001339CPSF39782.671ENSGAFG00000019449cpsf39982.671Gambusia_affinis
ENSMFAG00000001339CPSF37293.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSMFAG00000001339CPSF39899.843ENSGGOG00000001757CPSF310099.843Gorilla_gorilla
ENSMFAG00000001339CPSF39593.568ENSHBUG00000001188cpsf39985.463Haplochromis_burtoni
ENSMFAG00000001339CPSF36381.235ENSHBUG00000014332CPSF39981.235Haplochromis_burtoni
ENSMFAG00000001339CPSF310096.784ENSHGLG00000000666CPSF39996.784Heterocephalus_glaber_female
ENSMFAG00000001339CPSF310096.784ENSHGLG00100007765CPSF39996.784Heterocephalus_glaber_male
ENSMFAG00000001339CPSF39494.792ENSHCOG00000015957CPSF39786.176Hippocampus_comes
ENSMFAG00000001339CPSF39593.568ENSHCOG00000007251cpsf39984.751Hippocampus_comes
ENSMFAG00000001339CPSF39493.750ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSMFAG00000001339CPSF310098.830ENSSTOG00000004476CPSF310098.830Ictidomys_tridecemlineatus
ENSMFAG00000001339CPSF310097.661ENSJJAG00000023415Cpsf310097.661Jaculus_jaculus
ENSMFAG00000001339CPSF39493.555ENSKMAG00000002806cpsf39884.683Kryptolebias_marmoratus
ENSMFAG00000001339CPSF39495.000ENSKMAG00000007317CPSF39887.500Kryptolebias_marmoratus
ENSMFAG00000001339CPSF39495.208ENSLBEG00000013492CPSF39888.889Labrus_bergylta
ENSMFAG00000001339CPSF39488.981ENSLBEG00000020569cpsf39478.971Labrus_bergylta
ENSMFAG00000001339CPSF35879.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSMFAG00000001339CPSF39983.947ENSLACG00000008308CPSF39883.947Latimeria_chalumnae
ENSMFAG00000001339CPSF39495.000ENSLOCG00000016823cpsf39889.134Lepisosteus_oculatus
ENSMFAG00000001339CPSF39998.916ENSLAFG00000009467CPSF310097.647Loxodonta_africana
ENSMFAG00000001339CPSF3100100.000ENSMMUG00000018038CPSF3100100.000Macaca_mulatta
ENSMFAG00000001339CPSF39988.700ENSMNEG00000039447CPSF310087.281Macaca_nemestrina
ENSMFAG00000001339CPSF310099.854ENSMLEG00000026825CPSF310099.854Mandrillus_leucophaeus
ENSMFAG00000001339CPSF39494.167ENSMAMG00000003076cpsf39885.567Mastacembelus_armatus
ENSMFAG00000001339CPSF39785.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSMFAG00000001339CPSF39495.417ENSMZEG00005006258CPSF39888.382Maylandia_zebra
ENSMFAG00000001339CPSF39593.568ENSMZEG00005014358cpsf39985.463Maylandia_zebra
ENSMFAG00000001339CPSF39994.892ENSMGAG00000013995CPSF310095.052Meleagris_gallopavo
ENSMFAG00000001339CPSF35897.074ENSMAUG00000000166Cpsf310097.074Mesocricetus_auratus
ENSMFAG00000001339CPSF310093.860ENSMICG00000002363CPSF310093.860Microcebus_murinus
ENSMFAG00000001339CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSMFAG00000001339CPSF39982.143ENSMMOG00000018212CPSF39882.171Mola_mola
ENSMFAG00000001339CPSF37777.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSMFAG00000001339CPSF310095.948ENSMODG00000014703CPSF310095.948Monodelphis_domestica
ENSMFAG00000001339CPSF39593.568ENSMALG00000016416cpsf39985.903Monopterus_albus
ENSMFAG00000001339CPSF39883.281ENSMALG00000011474CPSF39983.281Monopterus_albus
ENSMFAG00000001339CPSF310098.538MGP_CAROLIEiJ_G0017640Cpsf310098.538Mus_caroli
ENSMFAG00000001339CPSF310098.538ENSMUSG00000054309Cpsf310098.538Mus_musculus
ENSMFAG00000001339CPSF310098.392MGP_PahariEiJ_G0029397Cpsf310098.392Mus_pahari
ENSMFAG00000001339CPSF310098.538MGP_SPRETEiJ_G0018481Cpsf310098.538Mus_spretus
ENSMFAG00000001339CPSF310098.684ENSMPUG00000013213CPSF310098.684Mustela_putorius_furo
ENSMFAG00000001339CPSF310098.394ENSMLUG00000010636CPSF310098.394Myotis_lucifugus
ENSMFAG00000001339CPSF310098.684ENSNGAG00000019836Cpsf310098.684Nannospalax_galili
ENSMFAG00000001339CPSF39891.036ENSNBRG00000004770cpsf39985.022Neolamprologus_brichardi
ENSMFAG00000001339CPSF39786.190ENSNBRG00000010525CPSF39986.190Neolamprologus_brichardi
ENSMFAG00000001339CPSF3100100.000ENSNLEG00000013359CPSF3100100.000Nomascus_leucogenys
ENSMFAG00000001339CPSF39966.718ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSMFAG00000001339CPSF310089.620ENSOPRG00000008902CPSF310089.620Ochotona_princeps
ENSMFAG00000001339CPSF310096.930ENSODEG00000003129CPSF310096.930Octodon_degus
ENSMFAG00000001339CPSF39891.036ENSONIG00000018812cpsf39985.609Oreochromis_niloticus
ENSMFAG00000001339CPSF38796.277ENSOANG00000008577CPSF310096.277Ornithorhynchus_anatinus
ENSMFAG00000001339CPSF310098.977ENSOCUG00000003728CPSF310098.977Oryctolagus_cuniculus
ENSMFAG00000001339CPSF39593.154ENSORLG00000018854cpsf39983.407Oryzias_latipes
ENSMFAG00000001339CPSF39593.154ENSORLG00020013331cpsf39983.407Oryzias_latipes_hni
ENSMFAG00000001339CPSF39593.154ENSORLG00015011017cpsf39983.407Oryzias_latipes_hsok
ENSMFAG00000001339CPSF39593.154ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSMFAG00000001339CPSF310089.620ENSOGAG00000001680CPSF310089.620Otolemur_garnettii
ENSMFAG00000001339CPSF310099.561ENSOARG00000015073CPSF310099.561Ovis_aries
ENSMFAG00000001339CPSF310099.854ENSPPAG00000042457CPSF310099.854Pan_paniscus
ENSMFAG00000001339CPSF310099.269ENSPPRG00000016790CPSF310099.269Panthera_pardus
ENSMFAG00000001339CPSF39999.265ENSPTIG00000003920CPSF310099.213Panthera_tigris_altaica
ENSMFAG00000001339CPSF310099.854ENSPTRG00000011638CPSF310099.854Pan_troglodytes
ENSMFAG00000001339CPSF310099.854ENSPANG00000016798CPSF310099.854Papio_anubis
ENSMFAG00000001339CPSF39495.426ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSMFAG00000001339CPSF39994.427ENSPSIG00000016144CPSF310093.704Pelodiscus_sinensis
ENSMFAG00000001339CPSF38491.142ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSMFAG00000001339CPSF36379.012ENSPMGG00000015311CPSF39979.012Periophthalmus_magnuspinnatus
ENSMFAG00000001339CPSF310098.246ENSPEMG00000017668Cpsf310098.246Peromyscus_maniculatus_bairdii
ENSMFAG00000001339CPSF39590.103ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSMFAG00000001339CPSF39997.368ENSPCIG00000009823CPSF39897.546Phascolarctos_cinereus
ENSMFAG00000001339CPSF39495.010ENSPFOG00000010418-9887.629Poecilia_formosa
ENSMFAG00000001339CPSF39593.154ENSPFOG00000015922cpsf39984.604Poecilia_formosa
ENSMFAG00000001339CPSF39593.154ENSPLAG00000000882cpsf39984.604Poecilia_latipinna
ENSMFAG00000001339CPSF36280.446ENSPLAG00000021300-9980.446Poecilia_latipinna
ENSMFAG00000001339CPSF39593.154ENSPMEG00000018309cpsf39984.751Poecilia_mexicana
ENSMFAG00000001339CPSF39881.918ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSMFAG00000001339CPSF39495.208ENSPREG00000004482CPSF39882.327Poecilia_reticulata
ENSMFAG00000001339CPSF310095.614ENSPPYG00000012666CPSF310095.614Pongo_abelii
ENSMFAG00000001339CPSF39172.043ENSPCAG00000015042CPSF310063.748Procavia_capensis
ENSMFAG00000001339CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSMFAG00000001339CPSF39999.413ENSPVAG00000005324CPSF39999.413Pteropus_vampyrus
ENSMFAG00000001339CPSF38493.023ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSMFAG00000001339CPSF39593.568ENSPNYG00000004405cpsf39985.463Pundamilia_nyererei
ENSMFAG00000001339CPSF39495.208ENSPNAG00000023060cpsf39887.500Pygocentrus_nattereri
ENSMFAG00000001339CPSF39998.534ENSRNOG00000052418Cpsf39998.534Rattus_norvegicus
ENSMFAG00000001339CPSF310095.062ENSRBIG00000041615CPSF39995.356Rhinopithecus_bieti
ENSMFAG00000001339CPSF310099.854ENSRROG00000033792CPSF310099.854Rhinopithecus_roxellana
ENSMFAG00000001339CPSF38853.205YLR277CYSH19540.805Saccharomyces_cerevisiae
ENSMFAG00000001339CPSF39995.385ENSSBOG00000027263CPSF310093.768Saimiri_boliviensis_boliviensis
ENSMFAG00000001339CPSF310097.661ENSSHAG00000007024CPSF310097.661Sarcophilus_harrisii
ENSMFAG00000001339CPSF39595.228ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSMFAG00000001339CPSF39494.802ENSSMAG00000020534CPSF39587.500Scophthalmus_maximus
ENSMFAG00000001339CPSF39495.208ENSSDUG00000018498CPSF39887.941Seriola_dumerili
ENSMFAG00000001339CPSF39593.568ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSMFAG00000001339CPSF39495.208ENSSLDG00000005234CPSF39887.941Seriola_lalandi_dorsalis
ENSMFAG00000001339CPSF39593.568ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSMFAG00000001339CPSF310081.287ENSSARG00000005186CPSF310081.287Sorex_araneus
ENSMFAG00000001339CPSF39992.000ENSSPUG00000015525CPSF39792.250Sphenodon_punctatus
ENSMFAG00000001339CPSF39495.000ENSSPAG00000002906CPSF39887.647Stegastes_partitus
ENSMFAG00000001339CPSF39493.958ENSSPAG00000018579cpsf39885.420Stegastes_partitus
ENSMFAG00000001339CPSF39999.268ENSSSCG00000020799CPSF39999.268Sus_scrofa
ENSMFAG00000001339CPSF39995.301ENSTGUG00000013016CPSF39995.301Taeniopygia_guttata
ENSMFAG00000001339CPSF36272.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSMFAG00000001339CPSF39494.179ENSTRUG00000007030cpsf39784.706Takifugu_rubripes
ENSMFAG00000001339CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSMFAG00000001339CPSF38898.387ENSTTRG00000000861CPSF38898.387Tursiops_truncatus
ENSMFAG00000001339CPSF39996.334ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSMFAG00000001339CPSF39999.381ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSMFAG00000001339CPSF39595.595ENSVPAG00000008041CPSF310095.741Vicugna_pacos
ENSMFAG00000001339CPSF310099.415ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSMFAG00000001339CPSF39595.643ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSMFAG00000001339CPSF39593.361ENSXCOG00000019695cpsf39984.897Xiphophorus_couchianus
ENSMFAG00000001339CPSF35778.976ENSXCOG00000000957-8778.976Xiphophorus_couchianus
ENSMFAG00000001339CPSF39495.010ENSXMAG00000027291CPSF39887.776Xiphophorus_maculatus
ENSMFAG00000001339CPSF39593.361ENSXMAG00000009784cpsf39984.604Xiphophorus_maculatus

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