EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000001394 (Gene tree)
Gene ID: 102137569
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 4406 bases
Position: chr16:79496337-79500742
Accession: 102137569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000008167	RRM_1	PF00076.22	2e-13	1	1
ENSMFAP00000008167	FYTT	PF07078.11	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000021892	ALYREF-201	774	XM_005585267	ENSMFAP00000008167	257 (aa)	XP_005585324	A0A2K5U747

Gene Model

Click here to download ENSMFAG00000001394's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03013	RNA transport	KEGG
mcf03015	mRNA surveillance pathway	KEGG
mcf03040	Spliceosome	KEGG
mcf05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000001394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000001394	ALYREF	100	96.591	ENSG00000183684	ALYREF	100	96.591	Homo_sapiens
ENSMFAG00000001394	ALYREF	97	68.382	ENSAPOG00000018455	ALYREF	100	72.426	Acanthochromis_polyacanthus
ENSMFAG00000001394	ALYREF	76	89.744	ENSAMEG00000017463	ALYREF	74	91.848	Ailuropoda_melanoleuca
ENSMFAG00000001394	ALYREF	97	75.573	ENSACAG00000010526	ALYREF	71	89.130	Anolis_carolinensis
ENSMFAG00000001394	ALYREF	69	97.740	ENSANAG00000022638	-	75	97.740	Aotus_nancymaae
ENSMFAG00000001394	ALYREF	100	85.603	ENSANAG00000028229	-	80	85.603	Aotus_nancymaae
ENSMFAG00000001394	ALYREF	97	95.331	ENSBTAG00000008498	ALYREF	100	95.331	Bos_taurus
ENSMFAG00000001394	ALYREF	100	96.212	ENSCJAG00000039942	ALYREF	100	96.212	Callithrix_jacchus
ENSMFAG00000001394	ALYREF	97	95.331	ENSCAFG00000005877	ALYREF	100	95.331	Canis_familiaris
ENSMFAG00000001394	ALYREF	97	95.331	ENSCAFG00020009815	ALYREF	100	95.331	Canis_lupus_dingo
ENSMFAG00000001394	ALYREF	97	94.574	ENSCHIG00000017396	ALYREF	97	94.574	Capra_hircus
ENSMFAG00000001394	ALYREF	84	83.857	ENSTSYG00000002272	ALYREF	69	98.286	Carlito_syrichta
ENSMFAG00000001394	ALYREF	52	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSMFAG00000001394	ALYREF	97	94.553	ENSCPOG00000013710	ALYREF	100	94.553	Cavia_porcellus
ENSMFAG00000001394	ALYREF	97	76.096	ENSCCAG00000030237	-	100	72.400	Cebus_capucinus
ENSMFAG00000001394	ALYREF	100	96.212	ENSCCAG00000020578	-	100	96.212	Cebus_capucinus
ENSMFAG00000001394	ALYREF	100	97.348	ENSCATG00000033169	ALYREF	100	97.348	Cercocebus_atys
ENSMFAG00000001394	ALYREF	97	90.000	ENSCLAG00000015026	ALYREF	100	90.400	Chinchilla_lanigera
ENSMFAG00000001394	ALYREF	100	97.348	ENSCSAG00000002216	ALYREF	100	97.348	Chlorocebus_sabaeus
ENSMFAG00000001394	ALYREF	70	96.685	ENSCANG00000034056	ALYREF	89	89.831	Colobus_angolensis_palliatus
ENSMFAG00000001394	ALYREF	97	91.829	ENSCGRG00001018191	-	100	89.453	Cricetulus_griseus_chok1gshd
ENSMFAG00000001394	ALYREF	74	91.623	ENSCGRG00000015871	-	90	87.097	Cricetulus_griseus_crigri
ENSMFAG00000001394	ALYREF	70	57.447	ENSCSEG00000015438	-	98	57.219	Cynoglossus_semilaevis
ENSMFAG00000001394	ALYREF	69	96.067	ENSDNOG00000002563	ALYREF	75	96.067	Dasypus_novemcinctus
ENSMFAG00000001394	ALYREF	89	82.403	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSMFAG00000001394	ALYREF	69	93.820	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSMFAG00000001394	ALYREF	100	94.318	ENSEASG00005005824	ALYREF	98	94.318	Equus_asinus_asinus
ENSMFAG00000001394	ALYREF	100	94.318	ENSECAG00000018754	ALYREF	98	94.318	Equus_caballus
ENSMFAG00000001394	ALYREF	64	92.442	ENSEEUG00000010164	ALYREF	100	89.474	Erinaceus_europaeus
ENSMFAG00000001394	ALYREF	99	95.038	ENSFCAG00000022549	ALYREF	99	95.038	Felis_catus
ENSMFAG00000001394	ALYREF	70	96.089	ENSFDAG00000001213	ALYREF	81	96.023	Fukomys_damarensis
ENSMFAG00000001394	ALYREF	97	82.625	ENSGALG00000007237	ALYREF	100	83.137	Gallus_gallus
ENSMFAG00000001394	ALYREF	97	70.656	ENSGACG00000013328	ALYREF	100	72.692	Gasterosteus_aculeatus
ENSMFAG00000001394	ALYREF	97	82.946	ENSGAGG00000008536	ALYREF	100	83.333	Gopherus_agassizii
ENSMFAG00000001394	ALYREF	100	96.970	ENSGGOG00000013935	ALYREF	100	96.970	Gorilla_gorilla
ENSMFAG00000001394	ALYREF	97	91.406	ENSHGLG00000008293	ALYREF	100	91.016	Heterocephalus_glaber_female
ENSMFAG00000001394	ALYREF	79	82.569	ENSHGLG00100006949	ALYREF	77	93.923	Heterocephalus_glaber_male
ENSMFAG00000001394	ALYREF	97	68.165	ENSHCOG00000015046	ALYREF	100	68.797	Hippocampus_comes
ENSMFAG00000001394	ALYREF	97	91.440	ENSJJAG00000004134	-	100	91.440	Jaculus_jaculus
ENSMFAG00000001394	ALYREF	97	69.767	ENSLACG00000005694	ALYREF	100	72.093	Latimeria_chalumnae
ENSMFAG00000001394	ALYREF	73	94.681	ENSLAFG00000003083	ALYREF	98	93.478	Loxodonta_africana
ENSMFAG00000001394	ALYREF	100	97.348	ENSMMUG00000012884	ALYREF	100	97.348	Macaca_mulatta
ENSMFAG00000001394	ALYREF	100	97.348	ENSMNEG00000043666	ALYREF	100	97.348	Macaca_nemestrina
ENSMFAG00000001394	ALYREF	72	88.421	ENSMLEG00000043353	ALYREF	83	89.444	Mandrillus_leucophaeus
ENSMFAG00000001394	ALYREF	97	79.600	ENSMAUG00000020552	-	100	77.381	Mesocricetus_auratus
ENSMFAG00000001394	ALYREF	99	95.057	ENSMICG00000017403	ALYREF	99	95.057	Microcebus_murinus
ENSMFAG00000001394	ALYREF	97	84.109	ENSMOCG00000016792	-	100	82.946	Microtus_ochrogaster
ENSMFAG00000001394	ALYREF	97	91.829	ENSMODG00000003030	ALYREF	84	89.883	Monodelphis_domestica
ENSMFAG00000001394	ALYREF	97	69.145	ENSMALG00000019408	ALYREF	100	72.119	Monopterus_albus
ENSMFAG00000001394	ALYREF	97	73.307	MGP_CAROLIEiJ_G0014874	Alyref2	100	69.600	Mus_caroli
ENSMFAG00000001394	ALYREF	97	93.774	MGP_CAROLIEiJ_G0017529	Alyref	100	93.774	Mus_caroli
ENSMFAG00000001394	ALYREF	97	61.303	ENSMUSG00000086727	4931428L18Rik	100	57.588	Mus_musculus
ENSMFAG00000001394	ALYREF	97	93.774	ENSMUSG00000025134	Alyref	100	93.774	Mus_musculus
ENSMFAG00000001394	ALYREF	98	61.649	ENSMUSG00000094144	Gm21312	100	53.069	Mus_musculus
ENSMFAG00000001394	ALYREF	97	61.871	ENSMUSG00000091779	Gm21293	100	53.069	Mus_musculus
ENSMFAG00000001394	ALYREF	98	61.649	ENSMUSG00000097878	Gm8764	99	59.375	Mus_musculus
ENSMFAG00000001394	ALYREF	97	60.536	ENSMUSG00000117091	AC153137.1	100	56.809	Mus_musculus
ENSMFAG00000001394	ALYREF	98	60.777	ENSMUSG00000090854	Gm4340	100	51.957	Mus_musculus
ENSMFAG00000001394	ALYREF	98	61.649	ENSMUSG00000095022	Gm20765	100	53.069	Mus_musculus
ENSMFAG00000001394	ALYREF	98	61.649	ENSMUSG00000097427	Gm6763	99	59.375	Mus_musculus
ENSMFAG00000001394	ALYREF	97	61.871	ENSMUSG00000097550	Gm21304	100	53.069	Mus_musculus
ENSMFAG00000001394	ALYREF	97	73.413	ENSMUSG00000060244	Alyref2	100	71.315	Mus_musculus
ENSMFAG00000001394	ALYREF	71	94.180	MGP_PahariEiJ_G0018656	-	99	94.180	Mus_pahari
ENSMFAG00000001394	ALYREF	97	93.774	MGP_PahariEiJ_G0018655	-	100	93.774	Mus_pahari
ENSMFAG00000001394	ALYREF	81	68.269	MGP_PahariEiJ_G0027254	-	84	65.500	Mus_pahari
ENSMFAG00000001394	ALYREF	81	68.269	MGP_PahariEiJ_G0027255	-	82	65.500	Mus_pahari
ENSMFAG00000001394	ALYREF	97	73.016	MGP_SPRETEiJ_G0015679	Alyref2	100	70.916	Mus_spretus
ENSMFAG00000001394	ALYREF	97	93.774	MGP_SPRETEiJ_G0018373	Alyref	100	93.774	Mus_spretus
ENSMFAG00000001394	ALYREF	69	57.269	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSMFAG00000001394	ALYREF	95	57.312	ENSMLUG00000024471	-	65	62.032	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	59.438	ENSMLUG00000022869	-	64	65.027	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	61.224	ENSMLUG00000024447	-	60	68.715	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	82	59.906	ENSMLUG00000028343	-	85	64.607	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	66.270	ENSMLUG00000002626	-	98	66.270	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	73	90.957	ENSMLUG00000009555	-	66	92.697	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	64.082	ENSMLUG00000026271	-	61	70.225	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	63.158	ENSMLUG00000024976	-	61	69.832	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	71.138	ENSMLUG00000027516	-	78	68.571	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	62.903	ENSMLUG00000025677	-	77	60.484	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	61.290	ENSMLUG00000030407	-	60	70.330	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	97	52.075	ENSMLUG00000023213	-	72	53.476	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	56.349	ENSMLUG00000015043	-	78	62.162	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	95	64.490	ENSMLUG00000027352	-	77	62.857	Myotis_lucifugus
ENSMFAG00000001394	ALYREF	100	96.970	ENSNLEG00000010313	ALYREF	100	96.970	Nomascus_leucogenys
ENSMFAG00000001394	ALYREF	52	94.776	ENSMEUG00000002210	ALYREF	59	94.776	Notamacropus_eugenii
ENSMFAG00000001394	ALYREF	52	91.791	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSMFAG00000001394	ALYREF	97	93.846	ENSODEG00000008359	ALYREF	100	93.846	Octodon_degus
ENSMFAG00000001394	ALYREF	97	69.517	ENSORLG00000012331	ALYREF	100	72.119	Oryzias_latipes
ENSMFAG00000001394	ALYREF	77	89.500	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSMFAG00000001394	ALYREF	69	97.753	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSMFAG00000001394	ALYREF	99	95.038	ENSPPRG00000010829	ALYREF	99	95.038	Panthera_pardus
ENSMFAG00000001394	ALYREF	56	97.931	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSMFAG00000001394	ALYREF	100	96.970	ENSPTRG00000009774	ALYREF	100	96.970	Pan_troglodytes
ENSMFAG00000001394	ALYREF	100	97.348	ENSPANG00000019265	ALYREF	100	97.348	Papio_anubis
ENSMFAG00000001394	ALYREF	51	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSMFAG00000001394	ALYREF	100	96.591	ENSPPYG00000008749	ALYREF	100	96.591	Pongo_abelii
ENSMFAG00000001394	ALYREF	99	95.057	ENSPCOG00000020874	ALYREF	99	95.057	Propithecus_coquereli
ENSMFAG00000001394	ALYREF	97	79.377	ENSPVAG00000017866	ALYREF	100	79.377	Pteropus_vampyrus
ENSMFAG00000001394	ALYREF	64	94.186	ENSRNOG00000036687	Alyref	91	94.186	Rattus_norvegicus
ENSMFAG00000001394	ALYREF	70	96.685	ENSRBIG00000039651	ALYREF	74	96.685	Rhinopithecus_bieti
ENSMFAG00000001394	ALYREF	89	88.596	ENSRROG00000045364	ALYREF	75	96.703	Rhinopithecus_roxellana
ENSMFAG00000001394	ALYREF	75	93.264	ENSSHAG00000010459	ALYREF	95	95.109	Sarcophilus_harrisii
ENSMFAG00000001394	ALYREF	97	53.506	ENSSDUG00000003992	-	100	54.982	Seriola_dumerili
ENSMFAG00000001394	ALYREF	97	54.478	ENSSLDG00000005386	-	100	55.597	Seriola_lalandi_dorsalis
ENSMFAG00000001394	ALYREF	97	80.620	ENSSPUG00000004600	ALYREF	100	80.620	Sphenodon_punctatus
ENSMFAG00000001394	ALYREF	97	68.498	ENSSPAG00000011178	ALYREF	97	70.330	Stegastes_partitus
ENSMFAG00000001394	ALYREF	97	95.331	ENSSSCG00000032655	ALYREF	100	95.331	Sus_scrofa
ENSMFAG00000001394	ALYREF	51	93.939	ENSTGUG00000003513	ALYREF	100	91.852	Taeniopygia_guttata
ENSMFAG00000001394	ALYREF	97	69.173	ENSTRUG00000008828	ALYREF	100	67.547	Takifugu_rubripes
ENSMFAG00000001394	ALYREF	69	96.067	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSMFAG00000001394	ALYREF	97	93.385	ENSTTRG00000012275	ALYREF	100	92.996	Tursiops_truncatus
ENSMFAG00000001394	ALYREF	69	83.051	ENSUAMG00000016931	ALYREF	66	81.356	Ursus_americanus
ENSMFAG00000001394	ALYREF	69	83.051	ENSUMAG00000016384	ALYREF	65	81.356	Ursus_maritimus
ENSMFAG00000001394	ALYREF	97	77.689	ENSXETG00000005391	alyref	100	76.000	Xenopus_tropicalis