EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMFAG00000001462 (Gene tree)
Gene ID
102131983
Gene Symbol
CPSF4
Alias
CPSF30|NAR
Full Name
cleavage and polyadenylation specific factor 4
Gene Type
protein_coding
Species
Macaca_fascicularis
Status
putative
Strand
Plus strand
Length
27371 bases
Position
chr3:43698030-43725400
Accession
102131983
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMFAP00000003507zf-CCCHPF00642.244.1e-2012
ENSMFAP00000003507zf-CCCHPF00642.244.1e-2022
ENSMFAP00000003459zf-CCCHPF00642.245.2e-2012
ENSMFAP00000003459zf-CCCHPF00642.245.2e-2022
ENSMFAP00000003494zf-CCCHPF00642.243.5e-1811
ENSMFAP00000003497zf-CCCHPF00642.242.1e-1512
ENSMFAP00000003497zf-CCCHPF00642.242.1e-1522
ENSMFAP00000003507zf-CCHCPF00098.234.3e-0611
ENSMFAP00000003497zf-CCHCPF00098.234.9e-0611
ENSMFAP00000003494zf-CCHCPF00098.235.6e-0611
ENSMFAP00000003459zf-CCHCPF00098.236.7e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMFAT00000022167CPSF4-2041810XM_015447098ENSMFAP00000003507191 (aa)XP_015302584A0A2K5TTX3
ENSMFAT00000022157CPSF4-203636-ENSMFAP00000003497211 (aa)-A0A2K5TTW2
ENSMFAT00000022154CPSF4-202699-ENSMFAP00000003494232 (aa)-A0A2K5TTV2
ENSMFAT00000022119CPSF4-2011836XM_005549139ENSMFAP00000003459269 (aa)XP_005549196G7P0A7
Gene Model
Click here to download ENSMFAG00000001462's gene model file
Pathways
Pathway IDPathway NameSource
mcf03015mRNA surveillance pathwayKEGG
mcf05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000001462's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMFAG00000001462CPSF47764.246ENSMFAG00000037840CPSF4L9964.246
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMFAG00000001462CPSF4100100.000ENSG00000160917CPSF4100100.000Homo_sapiens
ENSMFAG00000001462CPSF48268.362ENSAPOG00000004921cpsf410074.176Acanthochromis_polyacanthus
ENSMFAG00000001462CPSF410099.257ENSAMEG00000006252CPSF410099.257Ailuropoda_melanoleuca
ENSMFAG00000001462CPSF410087.435ENSACIG00000009248cpsf410082.158Amphilophus_citrinellus
ENSMFAG00000001462CPSF410084.815ENSAOCG00000019616cpsf410084.815Amphiprion_ocellaris
ENSMFAG00000001462CPSF410084.815ENSAPEG00000011679cpsf410084.815Amphiprion_percula
ENSMFAG00000001462CPSF410084.536ENSATEG00000007010cpsf410084.191Anabas_testudineus
ENSMFAG00000001462CPSF410093.680ENSACAG00000012941CPSF48993.680Anolis_carolinensis
ENSMFAG00000001462CPSF4100100.000ENSANAG00000021360CPSF4100100.000Aotus_nancymaae
ENSMFAG00000001462CPSF410084.074ENSACLG00000010374cpsf410084.074Astatotilapia_calliptera
ENSMFAG00000001462CPSF410085.782ENSAMXG00000031647cpsf410085.978Astyanax_mexicanus
ENSMFAG00000001462CPSF410098.429ENSBTAG00000002090CPSF410090.947Bos_taurus
ENSMFAG00000001462CPSF4100100.000ENSCJAG00000015826CPSF4100100.000Callithrix_jacchus
ENSMFAG00000001462CPSF410098.885ENSCAFG00000015036CPSF410098.885Canis_familiaris
ENSMFAG00000001462CPSF410092.565ENSCAFG00020014462CPSF410092.565Canis_lupus_dingo
ENSMFAG00000001462CPSF410099.257ENSCHIG00000014313CPSF410099.257Capra_hircus
ENSMFAG00000001462CPSF410092.188ENSTSYG00000008195-10089.503Carlito_syrichta
ENSMFAG00000001462CPSF410090.625ENSTSYG00000014604-10088.263Carlito_syrichta
ENSMFAG00000001462CPSF410099.476ENSTSYG00000005712-10099.052Carlito_syrichta
ENSMFAG00000001462CPSF410087.500ENSCAPG00000013881CPSF48799.083Cavia_aperea
ENSMFAG00000001462CPSF410099.052ENSCPOG00000001783CPSF410099.052Cavia_porcellus
ENSMFAG00000001462CPSF4100100.000ENSCCAG00000028291CPSF4100100.000Cebus_capucinus
ENSMFAG00000001462CPSF4100100.000ENSCATG00000038440CPSF4100100.000Cercocebus_atys
ENSMFAG00000001462CPSF410099.257ENSCLAG00000007050CPSF410099.257Chinchilla_lanigera
ENSMFAG00000001462CPSF4100100.000ENSCSAG00000017795CPSF4100100.000Chlorocebus_sabaeus
ENSMFAG00000001462CPSF47280.120ENSCPBG00000010269-10080.723Chrysemys_picta_bellii
ENSMFAG00000001462CPSF410082.407ENSCPBG00000020869CPSF410095.833Chrysemys_picta_bellii
ENSMFAG00000001462CPSF49755.939ENSCING00000021080-9755.939Ciona_intestinalis
ENSMFAG00000001462CPSF49653.546ENSCSAVG00000011469-9753.546Ciona_savignyi
ENSMFAG00000001462CPSF4100100.000ENSCANG00000019384CPSF4100100.000Colobus_angolensis_palliatus
ENSMFAG00000001462CPSF410099.052ENSCGRG00001024184Cpsf410099.052Cricetulus_griseus_chok1gshd
ENSMFAG00000001462CPSF410099.257ENSCGRG00000013892Cpsf410099.257Cricetulus_griseus_crigri
ENSMFAG00000001462CPSF410084.360ENSCSEG00000019055cpsf410084.360Cynoglossus_semilaevis
ENSMFAG00000001462CPSF410083.333ENSCVAG00000016528cpsf410083.333Cyprinodon_variegatus
ENSMFAG00000001462CPSF410085.240ENSDARG00000020217cpsf410085.240Danio_rerio
ENSMFAG00000001462CPSF410099.628ENSDNOG00000006344CPSF410099.628Dasypus_novemcinctus
ENSMFAG00000001462CPSF410087.037ENSDORG00000000742Cpsf410098.618Dipodomys_ordii
ENSMFAG00000001462CPSF410054.110FBgn0015621Clp9954.110Drosophila_melanogaster
ENSMFAG00000001462CPSF481100.000ENSETEG00000002608CPSF470100.000Echinops_telfairi
ENSMFAG00000001462CPSF49972.821ENSEBUG00000012552cpsf49870.711Eptatretus_burgeri
ENSMFAG00000001462CPSF410098.953ENSEASG00005002487CPSF410090.984Equus_asinus_asinus
ENSMFAG00000001462CPSF410099.257ENSECAG00000007525CPSF410099.257Equus_caballus
ENSMFAG00000001462CPSF468100.000ENSEEUG00000002158CPSF473100.000Erinaceus_europaeus
ENSMFAG00000001462CPSF410082.847ENSELUG00000011481cpsf410082.847Esox_lucius
ENSMFAG00000001462CPSF410099.257ENSFCAG00000015070CPSF410099.257Felis_catus
ENSMFAG00000001462CPSF410095.288ENSFALG00000013799CPSF410087.654Ficedula_albicollis
ENSMFAG00000001462CPSF47156.977ENSFALG00000012906-10056.977Ficedula_albicollis
ENSMFAG00000001462CPSF49098.354ENSFDAG00000014092CPSF410098.354Fukomys_damarensis
ENSMFAG00000001462CPSF410082.963ENSFHEG00000010880cpsf410082.963Fundulus_heteroclitus
ENSMFAG00000001462CPSF410079.310ENSGMOG00000002330cpsf410076.015Gadus_morhua
ENSMFAG00000001462CPSF49938.947ENSGALG00000004441-9238.764Gallus_gallus
ENSMFAG00000001462CPSF410094.764ENSGALG00000004714CPSF410089.344Gallus_gallus
ENSMFAG00000001462CPSF410082.222ENSGAFG00000010580cpsf410082.222Gambusia_affinis
ENSMFAG00000001462CPSF410082.412ENSGACG00000007792cpsf410076.384Gasterosteus_aculeatus
ENSMFAG00000001462CPSF410095.911ENSGAGG00000021835CPSF410095.911Gopherus_agassizii
ENSMFAG00000001462CPSF47976.087ENSGAGG00000020579-9976.087Gopherus_agassizii
ENSMFAG00000001462CPSF4100100.000ENSGGOG00000015131CPSF4100100.000Gorilla_gorilla
ENSMFAG00000001462CPSF410084.074ENSHBUG00000013699cpsf410084.074Haplochromis_burtoni
ENSMFAG00000001462CPSF410098.578ENSHGLG00000017150CPSF410098.578Heterocephalus_glaber_female
ENSMFAG00000001462CPSF410070.616ENSHGLG00100017302-10068.720Heterocephalus_glaber_male
ENSMFAG00000001462CPSF49986.111ENSHGLG00100009215-10096.023Heterocephalus_glaber_male
ENSMFAG00000001462CPSF410080.741ENSHCOG00000004397cpsf410080.741Hippocampus_comes
ENSMFAG00000001462CPSF410084.133ENSIPUG00000017147cpsf410085.294Ictalurus_punctatus
ENSMFAG00000001462CPSF410099.257ENSSTOG00000001688CPSF410099.257Ictidomys_tridecemlineatus
ENSMFAG00000001462CPSF410099.257ENSJJAG00000019426Cpsf410099.257Jaculus_jaculus
ENSMFAG00000001462CPSF410081.852ENSKMAG00000015642cpsf410081.852Kryptolebias_marmoratus
ENSMFAG00000001462CPSF410089.259ENSLACG00000010938CPSF410089.259Latimeria_chalumnae
ENSMFAG00000001462CPSF410064.777ENSLACG00000018470-10064.777Latimeria_chalumnae
ENSMFAG00000001462CPSF410089.219ENSLOCG00000004814cpsf410089.219Lepisosteus_oculatus
ENSMFAG00000001462CPSF410098.885ENSLAFG00000000159CPSF410098.885Loxodonta_africana
ENSMFAG00000001462CPSF4100100.000ENSMMUG00000019191CPSF4100100.000Macaca_mulatta
ENSMFAG00000001462CPSF4100100.000ENSMNEG00000032306CPSF4100100.000Macaca_nemestrina
ENSMFAG00000001462CPSF4100100.000ENSMLEG00000034721CPSF4100100.000Mandrillus_leucophaeus
ENSMFAG00000001462CPSF410084.074ENSMAMG00000006244cpsf410084.074Mastacembelus_armatus
ENSMFAG00000001462CPSF410084.074ENSMZEG00005007515cpsf410084.074Maylandia_zebra
ENSMFAG00000001462CPSF410094.764ENSMGAG00000004235CPSF410088.095Meleagris_gallopavo
ENSMFAG00000001462CPSF410099.257ENSMAUG00000021253Cpsf410099.257Mesocricetus_auratus
ENSMFAG00000001462CPSF410099.628ENSMICG00000017429CPSF410099.628Microcebus_murinus
ENSMFAG00000001462CPSF410099.257ENSMOCG00000014901Cpsf410099.257Microtus_ochrogaster
ENSMFAG00000001462CPSF410085.308ENSMMOG00000001813cpsf410085.308Mola_mola
ENSMFAG00000001462CPSF410097.770ENSMODG00000001367CPSF410097.770Monodelphis_domestica
ENSMFAG00000001462CPSF410082.963ENSMALG00000012611cpsf410082.963Monopterus_albus
ENSMFAG00000001462CPSF410099.257MGP_CAROLIEiJ_G0028012Cpsf410099.257Mus_caroli
ENSMFAG00000001462CPSF410099.257ENSMUSG00000029625Cpsf410099.257Mus_musculus
ENSMFAG00000001462CPSF410099.257MGP_PahariEiJ_G0024581Cpsf410099.257Mus_pahari
ENSMFAG00000001462CPSF410099.628MGP_SPRETEiJ_G0029013Cpsf410099.628Mus_spretus
ENSMFAG00000001462CPSF410099.257ENSMPUG00000016508CPSF410099.257Mustela_putorius_furo
ENSMFAG00000001462CPSF410098.429ENSMLUG00000010980CPSF49198.429Myotis_lucifugus
ENSMFAG00000001462CPSF410098.885ENSNGAG00000001567Cpsf410098.885Nannospalax_galili
ENSMFAG00000001462CPSF410079.245ENSNBRG00000003943cpsf49883.740Neolamprologus_brichardi
ENSMFAG00000001462CPSF4100100.000ENSNLEG00000011074CPSF4100100.000Nomascus_leucogenys
ENSMFAG00000001462CPSF410097.770ENSMEUG00000006955CPSF410097.770Notamacropus_eugenii
ENSMFAG00000001462CPSF410098.885ENSOPRG00000013663CPSF410098.885Ochotona_princeps
ENSMFAG00000001462CPSF410074.359ENSODEG00000009779-10074.359Octodon_degus
ENSMFAG00000001462CPSF49890.374ENSODEG00000018283-9177.500Octodon_degus
ENSMFAG00000001462CPSF410099.257ENSODEG00000011181-10099.257Octodon_degus
ENSMFAG00000001462CPSF410084.074ENSONIG00000008495cpsf410084.074Oreochromis_niloticus
ENSMFAG00000001462CPSF410053.957ENSOANG00000009568-10052.518Ornithorhynchus_anatinus
ENSMFAG00000001462CPSF410086.047ENSOANG00000007729CPSF410096.170Ornithorhynchus_anatinus
ENSMFAG00000001462CPSF410098.885ENSOCUG00000002437CPSF47098.885Oryctolagus_cuniculus
ENSMFAG00000001462CPSF410083.271ENSORLG00000022798cpsf410083.271Oryzias_latipes
ENSMFAG00000001462CPSF410083.271ENSORLG00020008548cpsf410083.271Oryzias_latipes_hni
ENSMFAG00000001462CPSF410082.900ENSORLG00015019575cpsf410082.900Oryzias_latipes_hsok
ENSMFAG00000001462CPSF410083.886ENSOMEG00000005176cpsf410083.886Oryzias_melastigma
ENSMFAG00000001462CPSF410099.628ENSOGAG00000010884CPSF410099.628Otolemur_garnettii
ENSMFAG00000001462CPSF410088.278ENSOARG00000018668CPSF410087.912Ovis_aries
ENSMFAG00000001462CPSF410099.628ENSPPAG00000043355CPSF410099.628Pan_paniscus
ENSMFAG00000001462CPSF410099.257ENSPPRG00000003134CPSF410099.257Panthera_pardus
ENSMFAG00000001462CPSF49099.174ENSPTIG00000005604CPSF49099.174Panthera_tigris_altaica
ENSMFAG00000001462CPSF410099.628ENSPTRG00000019453CPSF410099.628Pan_troglodytes
ENSMFAG00000001462CPSF4100100.000ENSPANG00000023123CPSF4100100.000Papio_anubis
ENSMFAG00000001462CPSF410084.307ENSPKIG00000014278cpsf410084.307Paramormyrops_kingsleyae
ENSMFAG00000001462CPSF410081.944ENSPSIG00000011229CPSF410095.370Pelodiscus_sinensis
ENSMFAG00000001462CPSF410065.464ENSPSIG00000018198-10064.767Pelodiscus_sinensis
ENSMFAG00000001462CPSF410085.864ENSPMGG00000017735cpsf410076.987Periophthalmus_magnuspinnatus
ENSMFAG00000001462CPSF410099.257ENSPEMG00000004508Cpsf410099.257Peromyscus_maniculatus_bairdii
ENSMFAG00000001462CPSF410097.770ENSPCIG00000024776CPSF410097.770Phascolarctos_cinereus
ENSMFAG00000001462CPSF410082.222ENSPFOG00000014912cpsf410082.222Poecilia_formosa
ENSMFAG00000001462CPSF410078.756ENSPLAG00000009599cpsf410078.049Poecilia_latipinna
ENSMFAG00000001462CPSF410082.222ENSPMEG00000009790cpsf410082.222Poecilia_mexicana
ENSMFAG00000001462CPSF410081.481ENSPREG00000018166cpsf410079.182Poecilia_reticulata
ENSMFAG00000001462CPSF410087.500ENSPPYG00000017378CPSF410099.145Pongo_abelii
ENSMFAG00000001462CPSF410098.141ENSPCAG00000001892CPSF410098.141Procavia_capensis
ENSMFAG00000001462CPSF410099.257ENSPCOG00000012771CPSF410099.257Propithecus_coquereli
ENSMFAG00000001462CPSF410092.565ENSPVAG00000007531CPSF410092.565Pteropus_vampyrus
ENSMFAG00000001462CPSF410084.074ENSPNYG00000018559cpsf410084.074Pundamilia_nyererei
ENSMFAG00000001462CPSF410086.347ENSPNAG00000003736cpsf410087.085Pygocentrus_nattereri
ENSMFAG00000001462CPSF410099.052ENSRNOG00000000985Cpsf410099.052Rattus_norvegicus
ENSMFAG00000001462CPSF410088.426ENSRBIG00000033886CPSF4100100.000Rhinopithecus_bieti
ENSMFAG00000001462CPSF4100100.000ENSRROG00000040431CPSF4100100.000Rhinopithecus_roxellana
ENSMFAG00000001462CPSF4100100.000ENSSBOG00000020493CPSF4100100.000Saimiri_boliviensis_boliviensis
ENSMFAG00000001462CPSF410097.770ENSSHAG00000011533CPSF410097.770Sarcophilus_harrisii
ENSMFAG00000001462CPSF410085.507ENSSFOG00015007883cpsf410086.232Scleropages_formosus
ENSMFAG00000001462CPSF410086.598ENSSMAG00000006374cpsf410080.894Scophthalmus_maximus
ENSMFAG00000001462CPSF410083.333ENSSDUG00000018887cpsf410083.333Seriola_dumerili
ENSMFAG00000001462CPSF410084.074ENSSLDG00000019078cpsf410084.074Seriola_lalandi_dorsalis
ENSMFAG00000001462CPSF410087.963ENSSARG00000012416CPSF410099.573Sorex_araneus
ENSMFAG00000001462CPSF49567.111ENSSPUG00000014803-9767.111Sphenodon_punctatus
ENSMFAG00000001462CPSF410094.424ENSSPUG00000003549CPSF410094.424Sphenodon_punctatus
ENSMFAG00000001462CPSF410087.958ENSSPAG00000006174cpsf410082.158Stegastes_partitus
ENSMFAG00000001462CPSF410099.476ENSSSCG00000026896CPSF410091.393Sus_scrofa
ENSMFAG00000001462CPSF410095.288ENSTGUG00000007552CPSF410086.531Taeniopygia_guttata
ENSMFAG00000001462CPSF410081.111ENSTRUG00000024220cpsf410081.111Takifugu_rubripes
ENSMFAG00000001462CPSF410080.000ENSTNIG00000006265cpsf410081.481Tetraodon_nigroviridis
ENSMFAG00000001462CPSF48790.171ENSTBEG00000011406CPSF410090.171Tupaia_belangeri
ENSMFAG00000001462CPSF485100.000ENSTTRG00000003007CPSF410078.810Tursiops_truncatus
ENSMFAG00000001462CPSF48898.225ENSUAMG00000008051CPSF48590.045Ursus_americanus
ENSMFAG00000001462CPSF410098.429ENSUMAG00000009474CPSF410090.947Ursus_maritimus
ENSMFAG00000001462CPSF410098.429ENSVVUG00000008824CPSF410091.393Vulpes_vulpes
ENSMFAG00000001462CPSF410088.172ENSXETG00000009892cpsf410088.172Xenopus_tropicalis
ENSMFAG00000001462CPSF49960.821ENSXETG00000004641cpsf4l9960.821Xenopus_tropicalis
ENSMFAG00000001462CPSF410083.886ENSXCOG00000016040cpsf410083.886Xiphophorus_couchianus
ENSMFAG00000001462CPSF410082.222ENSXMAG00000024670cpsf410082.222Xiphophorus_maculatus

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