EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000002004 (Gene tree)
Gene ID: 101865171
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 32450 bases
Position: chr1:123309176-123341625
Accession: 101865171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000004627	RRM_1	PF00076.22	3.5e-18	1	2
ENSMFAP00000004627	RRM_1	PF00076.22	3.5e-18	2	2
ENSMFAP00000004633	RRM_1	PF00076.22	3.5e-18	1	2
ENSMFAP00000004633	RRM_1	PF00076.22	3.5e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000023293	RNPC3-201	3953	XM_005542556	ENSMFAP00000004627	518 (aa)	XP_005542613	A0A2K5TX42
ENSMFAT00000023299	RNPC3-202	3705	XM_015432003	ENSMFAP00000004633	518 (aa)	XP_015287489	A0A2K5TX42

Gene Model

Click here to download ENSMFAG00000002004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000002004	RNPC3	98	72.638	ENSMFAG00000002917	-	98	70.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002004	RNPC3	99	99.417	ENSG00000185946	RNPC3	100	100.000	Homo_sapiens
ENSMFAG00000002004	RNPC3	95	57.056	ENSAPOG00000017371	rnpc3	97	57.056	Acanthochromis_polyacanthus
ENSMFAG00000002004	RNPC3	98	92.899	ENSAMEG00000001694	RNPC3	99	91.892	Ailuropoda_melanoleuca
ENSMFAG00000002004	RNPC3	95	53.663	ENSACIG00000021043	rnpc3	97	53.400	Amphilophus_citrinellus
ENSMFAG00000002004	RNPC3	95	56.287	ENSAOCG00000014052	rnpc3	95	56.287	Amphiprion_ocellaris
ENSMFAG00000002004	RNPC3	95	56.088	ENSAPEG00000008739	rnpc3	95	56.088	Amphiprion_percula
ENSMFAG00000002004	RNPC3	95	54.455	ENSATEG00000021263	rnpc3	97	54.455	Anabas_testudineus
ENSMFAG00000002004	RNPC3	87	68.571	ENSAPLG00000015605	RNPC3	100	69.451	Anas_platyrhynchos
ENSMFAG00000002004	RNPC3	98	67.451	ENSACAG00000002029	RNPC3	99	68.023	Anolis_carolinensis
ENSMFAG00000002004	RNPC3	99	97.282	ENSANAG00000019950	RNPC3	99	97.282	Aotus_nancymaae
ENSMFAG00000002004	RNPC3	94	54.545	ENSACLG00000014702	rnpc3	96	54.343	Astatotilapia_calliptera
ENSMFAG00000002004	RNPC3	94	58.032	ENSAMXG00000033372	rnpc3	96	58.032	Astyanax_mexicanus
ENSMFAG00000002004	RNPC3	99	93.010	ENSBTAG00000019091	RNPC3	99	93.010	Bos_taurus
ENSMFAG00000002004	RNPC3	99	92.427	ENSCJAG00000035686	RNPC3	99	92.816	Callithrix_jacchus
ENSMFAG00000002004	RNPC3	99	92.054	ENSCAFG00000019972	RNPC3	99	92.054	Canis_familiaris
ENSMFAG00000002004	RNPC3	99	92.248	ENSCAFG00020011300	RNPC3	99	92.248	Canis_lupus_dingo
ENSMFAG00000002004	RNPC3	99	92.816	ENSCHIG00000020361	RNPC3	99	92.816	Capra_hircus
ENSMFAG00000002004	RNPC3	99	91.262	ENSTSYG00000030256	RNPC3	99	91.262	Carlito_syrichta
ENSMFAG00000002004	RNPC3	84	80.092	ENSCAPG00000013600	RNPC3	99	78.947	Cavia_aperea
ENSMFAG00000002004	RNPC3	99	90.680	ENSCPOG00000031638	RNPC3	99	90.680	Cavia_porcellus
ENSMFAG00000002004	RNPC3	99	97.282	ENSCCAG00000024301	RNPC3	99	97.282	Cebus_capucinus
ENSMFAG00000002004	RNPC3	98	74.606	ENSCATG00000035930	-	99	72.638	Cercocebus_atys
ENSMFAG00000002004	RNPC3	100	99.807	ENSCATG00000002086	RNPC3	100	99.807	Cercocebus_atys
ENSMFAG00000002004	RNPC3	99	86.408	ENSCLAG00000005169	RNPC3	99	86.408	Chinchilla_lanigera
ENSMFAG00000002004	RNPC3	100	99.614	ENSCSAG00000001519	RNPC3	100	99.614	Chlorocebus_sabaeus
ENSMFAG00000002004	RNPC3	95	70.766	ENSCPBG00000028311	RNPC3	95	70.565	Chrysemys_picta_bellii
ENSMFAG00000002004	RNPC3	95	37.598	ENSCING00000021276	-	98	37.675	Ciona_intestinalis
ENSMFAG00000002004	RNPC3	93	37.423	ENSCSAVG00000002800	-	78	54.015	Ciona_savignyi
ENSMFAG00000002004	RNPC3	100	98.842	ENSCANG00000031444	RNPC3	100	98.842	Colobus_angolensis_palliatus
ENSMFAG00000002004	RNPC3	99	89.320	ENSCGRG00001019276	Rnpc3	99	89.320	Cricetulus_griseus_chok1gshd
ENSMFAG00000002004	RNPC3	87	89.800	ENSCGRG00000000053	Rnpc3	99	89.800	Cricetulus_griseus_crigri
ENSMFAG00000002004	RNPC3	94	54.472	ENSCSEG00000013475	rnpc3	95	53.893	Cynoglossus_semilaevis
ENSMFAG00000002004	RNPC3	94	53.543	ENSCVAG00000002645	rnpc3	96	54.672	Cyprinodon_variegatus
ENSMFAG00000002004	RNPC3	94	57.822	ENSDARG00000011247	rnpc3	94	64.943	Danio_rerio
ENSMFAG00000002004	RNPC3	99	91.262	ENSDNOG00000044555	-	99	91.262	Dasypus_novemcinctus
ENSMFAG00000002004	RNPC3	99	91.262	ENSDNOG00000047498	-	99	91.262	Dasypus_novemcinctus
ENSMFAG00000002004	RNPC3	99	90.097	ENSDORG00000027343	Rnpc3	99	90.097	Dipodomys_ordii
ENSMFAG00000002004	RNPC3	95	48.249	ENSEBUG00000002068	rnpc3	97	48.242	Eptatretus_burgeri
ENSMFAG00000002004	RNPC3	99	92.248	ENSEASG00005015957	RNPC3	99	92.248	Equus_asinus_asinus
ENSMFAG00000002004	RNPC3	99	92.442	ENSECAG00000021148	RNPC3	99	92.442	Equus_caballus
ENSMFAG00000002004	RNPC3	95	53.346	ENSELUG00000002264	rnpc3	98	50.844	Esox_lucius
ENSMFAG00000002004	RNPC3	99	92.442	ENSFCAG00000024312	RNPC3	99	92.442	Felis_catus
ENSMFAG00000002004	RNPC3	87	71.648	ENSFALG00000002580	RNPC3	100	70.952	Ficedula_albicollis
ENSMFAG00000002004	RNPC3	99	90.680	ENSFDAG00000019948	RNPC3	99	90.680	Fukomys_damarensis
ENSMFAG00000002004	RNPC3	95	50.794	ENSFHEG00000020647	rnpc3	98	50.391	Fundulus_heteroclitus
ENSMFAG00000002004	RNPC3	94	54.000	ENSGMOG00000019213	rnpc3	96	53.213	Gadus_morhua
ENSMFAG00000002004	RNPC3	95	71.573	ENSGALG00000005162	RNPC3	89	70.968	Gallus_gallus
ENSMFAG00000002004	RNPC3	94	53.000	ENSGAFG00000017236	rnpc3	96	52.610	Gambusia_affinis
ENSMFAG00000002004	RNPC3	94	55.000	ENSGACG00000002048	rnpc3	96	55.159	Gasterosteus_aculeatus
ENSMFAG00000002004	RNPC3	95	70.363	ENSGAGG00000008438	RNPC3	95	70.363	Gopherus_agassizii
ENSMFAG00000002004	RNPC3	98	77.407	ENSGGOG00000026201	-	98	77.407	Gorilla_gorilla
ENSMFAG00000002004	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSMFAG00000002004	RNPC3	99	91.456	ENSHGLG00000001708	RNPC3	99	91.456	Heterocephalus_glaber_female
ENSMFAG00000002004	RNPC3	99	91.456	ENSHGLG00100003005	RNPC3	99	91.456	Heterocephalus_glaber_male
ENSMFAG00000002004	RNPC3	95	54.839	ENSHCOG00000017135	rnpc3	97	54.839	Hippocampus_comes
ENSMFAG00000002004	RNPC3	93	57.114	ENSIPUG00000002916	rnpc3	95	57.114	Ictalurus_punctatus
ENSMFAG00000002004	RNPC3	99	91.650	ENSSTOG00000025020	RNPC3	99	91.650	Ictidomys_tridecemlineatus
ENSMFAG00000002004	RNPC3	99	87.573	ENSJJAG00000010203	Rnpc3	99	88.544	Jaculus_jaculus
ENSMFAG00000002004	RNPC3	94	55.444	ENSKMAG00000017358	rnpc3	97	54.851	Kryptolebias_marmoratus
ENSMFAG00000002004	RNPC3	95	55.800	ENSLBEG00000024901	rnpc3	95	56.112	Labrus_bergylta
ENSMFAG00000002004	RNPC3	95	61.492	ENSLACG00000005720	RNPC3	89	63.115	Latimeria_chalumnae
ENSMFAG00000002004	RNPC3	94	58.487	ENSLOCG00000007986	rnpc3	96	60.736	Lepisosteus_oculatus
ENSMFAG00000002004	RNPC3	99	89.903	ENSLAFG00000032342	RNPC3	99	89.903	Loxodonta_africana
ENSMFAG00000002004	RNPC3	83	86.385	ENSMMUG00000002098	-	93	86.385	Macaca_mulatta
ENSMFAG00000002004	RNPC3	100	99.614	ENSMMUG00000018039	RNPC3	100	99.614	Macaca_mulatta
ENSMFAG00000002004	RNPC3	98	69.155	ENSMNEG00000029209	-	99	67.583	Macaca_nemestrina
ENSMFAG00000002004	RNPC3	100	95.174	ENSMNEG00000033950	RNPC3	100	95.174	Macaca_nemestrina
ENSMFAG00000002004	RNPC3	98	72.763	ENSMLEG00000034644	-	99	69.052	Mandrillus_leucophaeus
ENSMFAG00000002004	RNPC3	100	99.807	ENSMLEG00000033628	RNPC3	100	99.807	Mandrillus_leucophaeus
ENSMFAG00000002004	RNPC3	95	51.992	ENSMAMG00000007496	rnpc3	96	51.176	Mastacembelus_armatus
ENSMFAG00000002004	RNPC3	94	53.649	ENSMZEG00005020233	rnpc3	97	53.649	Maylandia_zebra
ENSMFAG00000002004	RNPC3	87	69.565	ENSMGAG00000006381	RNPC3	100	70.000	Meleagris_gallopavo
ENSMFAG00000002004	RNPC3	96	90.964	ENSMAUG00000001358	Rnpc3	99	89.709	Mesocricetus_auratus
ENSMFAG00000002004	RNPC3	99	93.786	ENSMICG00000029591	RNPC3	99	93.786	Microcebus_murinus
ENSMFAG00000002004	RNPC3	96	90.180	ENSMOCG00000013423	Rnpc3	99	88.588	Microtus_ochrogaster
ENSMFAG00000002004	RNPC3	95	51.724	ENSMMOG00000005309	rnpc3	97	51.703	Mola_mola
ENSMFAG00000002004	RNPC3	99	78.641	ENSMODG00000002946	RNPC3	99	78.641	Monodelphis_domestica
ENSMFAG00000002004	RNPC3	94	53.213	ENSMALG00000015471	rnpc3	97	53.213	Monopterus_albus
ENSMFAG00000002004	RNPC3	99	87.767	MGP_CAROLIEiJ_G0025555	Rnpc3	99	87.992	Mus_caroli
ENSMFAG00000002004	RNPC3	99	88.350	ENSMUSG00000027981	Rnpc3	99	88.985	Mus_musculus
ENSMFAG00000002004	RNPC3	99	87.767	MGP_PahariEiJ_G0027001	Rnpc3	99	87.992	Mus_pahari
ENSMFAG00000002004	RNPC3	99	87.767	MGP_SPRETEiJ_G0026505	Rnpc3	99	87.992	Mus_spretus
ENSMFAG00000002004	RNPC3	99	91.683	ENSMPUG00000007349	RNPC3	99	91.683	Mustela_putorius_furo
ENSMFAG00000002004	RNPC3	99	89.883	ENSMLUG00000028743	RNPC3	99	89.883	Myotis_lucifugus
ENSMFAG00000002004	RNPC3	99	89.084	ENSNGAG00000010939	Rnpc3	99	89.126	Nannospalax_galili
ENSMFAG00000002004	RNPC3	94	54.141	ENSNBRG00000012196	rnpc3	93	54.141	Neolamprologus_brichardi
ENSMFAG00000002004	RNPC3	99	98.835	ENSNLEG00000012013	RNPC3	99	98.835	Nomascus_leucogenys
ENSMFAG00000002004	RNPC3	99	88.544	ENSODEG00000007612	RNPC3	99	88.544	Octodon_degus
ENSMFAG00000002004	RNPC3	94	55.152	ENSONIG00000004770	rnpc3	99	55.152	Oreochromis_niloticus
ENSMFAG00000002004	RNPC3	90	77.634	ENSOANG00000008220	RNPC3	99	77.634	Ornithorhynchus_anatinus
ENSMFAG00000002004	RNPC3	99	91.262	ENSOCUG00000004016	RNPC3	99	91.262	Oryctolagus_cuniculus
ENSMFAG00000002004	RNPC3	95	53.924	ENSORLG00000005694	rnpc3	97	53.924	Oryzias_latipes
ENSMFAG00000002004	RNPC3	95	54.637	ENSORLG00020005513	rnpc3	97	54.637	Oryzias_latipes_hni
ENSMFAG00000002004	RNPC3	95	54.032	ENSORLG00015002179	rnpc3	97	54.032	Oryzias_latipes_hsok
ENSMFAG00000002004	RNPC3	95	54.747	ENSOMEG00000017737	rnpc3	97	56.048	Oryzias_melastigma
ENSMFAG00000002004	RNPC3	99	93.204	ENSOGAG00000026182	RNPC3	99	93.204	Otolemur_garnettii
ENSMFAG00000002004	RNPC3	99	93.010	ENSOARG00000018719	RNPC3	99	93.010	Ovis_aries
ENSMFAG00000002004	RNPC3	99	79.223	ENSPPAG00000030278	-	99	79.417	Pan_paniscus
ENSMFAG00000002004	RNPC3	99	99.031	ENSPPAG00000037459	RNPC3	99	99.031	Pan_paniscus
ENSMFAG00000002004	RNPC3	99	92.442	ENSPPRG00000020246	RNPC3	99	92.442	Panthera_pardus
ENSMFAG00000002004	RNPC3	98	92.688	ENSPTIG00000009887	RNPC3	99	92.688	Panthera_tigris_altaica
ENSMFAG00000002004	RNPC3	99	78.252	ENSPTRG00000044227	-	99	78.252	Pan_troglodytes
ENSMFAG00000002004	RNPC3	99	99.223	ENSPTRG00000033902	RNPC3	99	99.223	Pan_troglodytes
ENSMFAG00000002004	RNPC3	100	99.614	ENSPANG00000012137	RNPC3	100	99.614	Papio_anubis
ENSMFAG00000002004	RNPC3	97	76.726	ENSPANG00000029957	-	99	72.387	Papio_anubis
ENSMFAG00000002004	RNPC3	94	53.187	ENSPKIG00000008828	rnpc3	95	51.663	Paramormyrops_kingsleyae
ENSMFAG00000002004	RNPC3	63	69.486	ENSPSIG00000007396	RNPC3	99	67.674	Pelodiscus_sinensis
ENSMFAG00000002004	RNPC3	93	51.717	ENSPMGG00000011742	rnpc3	95	52.227	Periophthalmus_magnuspinnatus
ENSMFAG00000002004	RNPC3	88	89.474	ENSPEMG00000020112	Rnpc3	99	90.244	Peromyscus_maniculatus_bairdii
ENSMFAG00000002004	RNPC3	96	45.594	ENSPMAG00000003778	rnpc3	98	45.873	Petromyzon_marinus
ENSMFAG00000002004	RNPC3	99	79.029	ENSPCIG00000004415	-	99	79.029	Phascolarctos_cinereus
ENSMFAG00000002004	RNPC3	96	52.590	ENSPFOG00000009895	rnpc3	97	52.811	Poecilia_formosa
ENSMFAG00000002004	RNPC3	96	52.590	ENSPLAG00000012023	rnpc3	97	52.811	Poecilia_latipinna
ENSMFAG00000002004	RNPC3	96	53.175	ENSPMEG00000003663	rnpc3	97	53.012	Poecilia_mexicana
ENSMFAG00000002004	RNPC3	96	52.789	ENSPREG00000010206	rnpc3	97	52.906	Poecilia_reticulata
ENSMFAG00000002004	RNPC3	84	96.544	ENSPPYG00000001102	RNPC3	99	96.544	Pongo_abelii
ENSMFAG00000002004	RNPC3	94	54.343	ENSPNYG00000020603	rnpc3	96	54.141	Pundamilia_nyererei
ENSMFAG00000002004	RNPC3	95	55.030	ENSPNAG00000000524	rnpc3	89	55.424	Pygocentrus_nattereri
ENSMFAG00000002004	RNPC3	99	87.573	ENSRNOG00000017310	Rnpc3	99	87.573	Rattus_norvegicus
ENSMFAG00000002004	RNPC3	100	93.642	ENSRBIG00000043897	RNPC3	100	93.642	Rhinopithecus_bieti
ENSMFAG00000002004	RNPC3	100	99.421	ENSRROG00000032334	RNPC3	100	99.421	Rhinopithecus_roxellana
ENSMFAG00000002004	RNPC3	99	96.311	ENSSBOG00000024473	RNPC3	99	96.311	Saimiri_boliviensis_boliviensis
ENSMFAG00000002004	RNPC3	99	78.835	ENSSHAG00000011859	RNPC3	99	78.835	Sarcophilus_harrisii
ENSMFAG00000002004	RNPC3	96	59.127	ENSSFOG00015013055	rnpc3	99	57.143	Scleropages_formosus
ENSMFAG00000002004	RNPC3	95	51.896	ENSSMAG00000020346	rnpc3	97	50.775	Scophthalmus_maximus
ENSMFAG00000002004	RNPC3	94	54.672	ENSSDUG00000006600	rnpc3	96	54.672	Seriola_dumerili
ENSMFAG00000002004	RNPC3	94	54.871	ENSSLDG00000007979	rnpc3	96	54.871	Seriola_lalandi_dorsalis
ENSMFAG00000002004	RNPC3	93	71.340	ENSSPUG00000008539	-	92	71.901	Sphenodon_punctatus
ENSMFAG00000002004	RNPC3	96	65.531	ENSSPUG00000003872	-	93	65.531	Sphenodon_punctatus
ENSMFAG00000002004	RNPC3	95	55.691	ENSSPAG00000005633	rnpc3	97	56.301	Stegastes_partitus
ENSMFAG00000002004	RNPC3	99	93.010	ENSSSCG00000037254	RNPC3	99	92.039	Sus_scrofa
ENSMFAG00000002004	RNPC3	87	70.485	ENSTGUG00000004795	-	100	69.383	Taeniopygia_guttata
ENSMFAG00000002004	RNPC3	95	55.110	ENSTNIG00000018963	rnpc3	97	55.110	Tetraodon_nigroviridis
ENSMFAG00000002004	RNPC3	98	93.281	ENSUMAG00000007775	RNPC3	99	93.281	Ursus_maritimus
ENSMFAG00000002004	RNPC3	99	92.248	ENSVVUG00000000331	RNPC3	99	92.248	Vulpes_vulpes
ENSMFAG00000002004	RNPC3	93	52.653	ENSXETG00000025027	rnpc3	95	52.653	Xenopus_tropicalis
ENSMFAG00000002004	RNPC3	96	51.451	ENSXCOG00000005013	rnpc3	97	50.672	Xiphophorus_couchianus
ENSMFAG00000002004	RNPC3	96	52.964	ENSXMAG00000006495	rnpc3	97	52.778	Xiphophorus_maculatus