EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000002117 (Gene tree)
Gene ID: 101865868
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 78083 bases
Position: chrX:126322939-126401021
Accession: 101865868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000005423	ResIII	PF04851.15	8.7e-12	1	1
ENSMFAP00000005434	ResIII	PF04851.15	8.7e-12	1	1
ENSMFAP00000005400	ResIII	PF04851.15	8.8e-12	1	1
ENSMFAP00000005409	ResIII	PF04851.15	1e-11	1	1
ENSMFAP00000005434	DEAD	PF00270.29	1.5e-06	1	1
ENSMFAP00000005400	DEAD	PF00270.29	1.6e-06	1	1
ENSMFAP00000005423	DEAD	PF00270.29	1.7e-06	1	1
ENSMFAP00000005409	DEAD	PF00270.29	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000024076	SMARCA1-201	4072	XM_005594534	ENSMFAP00000005400	1042 (aa)	XP_005594591	A0A2K5TZ87
ENSMFAT00000024100	SMARCA1-203	3213	XM_005594531	ENSMFAP00000005423	1070 (aa)	XP_005594588	A0A2K5TZG0
ENSMFAT00000024111	SMARCA1-204	3024	-	ENSMFAP00000005434	1007 (aa)	-	A0A2K5TZA9
ENSMFAT00000024085	SMARCA1-202	3576	-	ENSMFAP00000005409	1110 (aa)	-	A0A2K5TZ91

Gene Model

Click here to download ENSMFAG00000002117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000002117	SMARCA1	52	42.287	ENSMFAG00000032830	CHD6	75	40.048
ENSMFAG00000002117	SMARCA1	94	86.211	ENSMFAG00000043649	SMARCA5	94	85.035
ENSMFAG00000002117	SMARCA1	56	44.248	ENSMFAG00000043562	CHD1L	63	44.320
ENSMFAG00000002117	SMARCA1	52	48.207	ENSMFAG00000044053	HELLS	78	48.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002117	SMARCA1	100	100.000	ENSG00000102038	SMARCA1	100	100.000	Homo_sapiens
ENSMFAG00000002117	SMARCA1	93	84.771	ENSAPOG00000016035	smarca5	98	84.026	Acanthochromis_polyacanthus
ENSMFAG00000002117	SMARCA1	100	97.009	ENSAMEG00000015218	SMARCA1	100	97.009	Ailuropoda_melanoleuca
ENSMFAG00000002117	SMARCA1	86	85.532	ENSACIG00000016982	smarca5	99	84.152	Amphilophus_citrinellus
ENSMFAG00000002117	SMARCA1	93	84.771	ENSAOCG00000015578	smarca5	95	82.762	Amphiprion_ocellaris
ENSMFAG00000002117	SMARCA1	93	84.771	ENSAPEG00000011117	smarca5	99	84.080	Amphiprion_percula
ENSMFAG00000002117	SMARCA1	99	81.138	ENSATEG00000012894	smarca5	95	83.213	Anabas_testudineus
ENSMFAG00000002117	SMARCA1	94	93.856	ENSAPLG00000013149	SMARCA1	100	93.279	Anas_platyrhynchos
ENSMFAG00000002117	SMARCA1	97	91.726	ENSACAG00000011376	SMARCA1	95	91.491	Anolis_carolinensis
ENSMFAG00000002117	SMARCA1	100	94.766	ENSANAG00000023098	SMARCA1	100	94.802	Aotus_nancymaae
ENSMFAG00000002117	SMARCA1	94	84.762	ENSACLG00000025356	smarca5	95	83.165	Astatotilapia_calliptera
ENSMFAG00000002117	SMARCA1	93	85.181	ENSAMXG00000005709	smarca5	94	84.000	Astyanax_mexicanus
ENSMFAG00000002117	SMARCA1	91	88.889	ENSAMXG00000011227	smarca1	99	90.182	Astyanax_mexicanus
ENSMFAG00000002117	SMARCA1	99	97.495	ENSBTAG00000002292	SMARCA1	99	97.429	Bos_taurus
ENSMFAG00000002117	SMARCA1	95	64.264	WBGene00002169	isw-1	97	63.673	Caenorhabditis_elegans
ENSMFAG00000002117	SMARCA1	100	99.626	ENSCJAG00000002868	SMARCA1	100	99.716	Callithrix_jacchus
ENSMFAG00000002117	SMARCA1	100	88.941	ENSCAFG00000018673	SMARCA1	99	88.824	Canis_familiaris
ENSMFAG00000002117	SMARCA1	99	98.647	ENSCAFG00020001751	SMARCA1	100	98.677	Canis_lupus_dingo
ENSMFAG00000002117	SMARCA1	99	97.495	ENSCHIG00000009837	SMARCA1	100	97.549	Capra_hircus
ENSMFAG00000002117	SMARCA1	98	98.584	ENSTSYG00000004240	SMARCA1	99	98.584	Carlito_syrichta
ENSMFAG00000002117	SMARCA1	98	96.300	ENSCPOG00000013601	SMARCA1	99	95.989	Cavia_porcellus
ENSMFAG00000002117	SMARCA1	100	96.729	ENSCCAG00000030817	SMARCA1	100	96.786	Cebus_capucinus
ENSMFAG00000002117	SMARCA1	100	100.000	ENSCATG00000015921	SMARCA1	100	100.000	Cercocebus_atys
ENSMFAG00000002117	SMARCA1	99	97.005	ENSCLAG00000002171	SMARCA1	100	97.070	Chinchilla_lanigera
ENSMFAG00000002117	SMARCA1	99	99.903	ENSCSAG00000008460	SMARCA1	100	99.905	Chlorocebus_sabaeus
ENSMFAG00000002117	SMARCA1	99	91.767	ENSCPBG00000001146	SMARCA1	94	92.793	Chrysemys_picta_bellii
ENSMFAG00000002117	SMARCA1	94	74.921	ENSCING00000004110	swi/snf	97	73.797	Ciona_intestinalis
ENSMFAG00000002117	SMARCA1	94	73.931	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSMFAG00000002117	SMARCA1	100	99.907	ENSCANG00000007183	SMARCA1	100	99.907	Colobus_angolensis_palliatus
ENSMFAG00000002117	SMARCA1	100	94.865	ENSCGRG00001010776	Smarca1	98	96.343	Cricetulus_griseus_chok1gshd
ENSMFAG00000002117	SMARCA1	98	96.162	ENSCGRG00000015301	Smarca1	99	96.162	Cricetulus_griseus_crigri
ENSMFAG00000002117	SMARCA1	95	84.326	ENSCSEG00000000328	smarca5	95	83.114	Cynoglossus_semilaevis
ENSMFAG00000002117	SMARCA1	94	84.127	ENSCVAG00000008668	smarca5	99	83.628	Cyprinodon_variegatus
ENSMFAG00000002117	SMARCA1	94	83.841	ENSDARG00000052348	smarca5	95	82.727	Danio_rerio
ENSMFAG00000002117	SMARCA1	96	85.930	ENSDARG00000012776	smarca1	97	85.375	Danio_rerio
ENSMFAG00000002117	SMARCA1	99	96.139	ENSDNOG00000004315	SMARCA1	100	96.139	Dasypus_novemcinctus
ENSMFAG00000002117	SMARCA1	100	96.449	ENSDORG00000009270	Smarca1	100	96.449	Dipodomys_ordii
ENSMFAG00000002117	SMARCA1	94	74.004	FBgn0011604	Iswi	98	72.305	Drosophila_melanogaster
ENSMFAG00000002117	SMARCA1	81	93.750	ENSETEG00000017426	SMARCA1	86	93.750	Echinops_telfairi
ENSMFAG00000002117	SMARCA1	93	82.334	ENSEBUG00000001239	smarca5	96	80.899	Eptatretus_burgeri
ENSMFAG00000002117	SMARCA1	97	93.750	ENSEASG00005008218	SMARCA1	100	93.333	Equus_asinus_asinus
ENSMFAG00000002117	SMARCA1	99	97.977	ENSECAG00000012106	SMARCA1	100	98.021	Equus_caballus
ENSMFAG00000002117	SMARCA1	80	97.682	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSMFAG00000002117	SMARCA1	96	87.140	ENSELUG00000010515	smarca1	98	86.927	Esox_lucius
ENSMFAG00000002117	SMARCA1	100	98.598	ENSFCAG00000018496	SMARCA1	100	98.677	Felis_catus
ENSMFAG00000002117	SMARCA1	91	93.531	ENSFALG00000000209	SMARCA1	98	93.640	Ficedula_albicollis
ENSMFAG00000002117	SMARCA1	98	96.503	ENSFDAG00000009818	SMARCA1	97	97.982	Fukomys_damarensis
ENSMFAG00000002117	SMARCA1	94	84.550	ENSFHEG00000007687	smarca5	94	82.828	Fundulus_heteroclitus
ENSMFAG00000002117	SMARCA1	96	93.043	ENSGALG00000008431	SMARCA1	97	92.835	Gallus_gallus
ENSMFAG00000002117	SMARCA1	94	84.550	ENSGAFG00000017731	smarca5	95	82.828	Gambusia_affinis
ENSMFAG00000002117	SMARCA1	94	93.664	ENSGAGG00000023575	SMARCA1	100	93.519	Gopherus_agassizii
ENSMFAG00000002117	SMARCA1	76	96.000	ENSGGOG00000012841	-	98	96.000	Gorilla_gorilla
ENSMFAG00000002117	SMARCA1	99	97.101	ENSHGLG00000003080	SMARCA1	100	97.070	Heterocephalus_glaber_female
ENSMFAG00000002117	SMARCA1	97	97.035	ENSHGLG00100001102	SMARCA1	100	96.803	Heterocephalus_glaber_male
ENSMFAG00000002117	SMARCA1	93	84.591	ENSHCOG00000005458	smarca5	95	82.727	Hippocampus_comes
ENSMFAG00000002117	SMARCA1	98	86.032	ENSIPUG00000016905	Smarca1	99	86.925	Ictalurus_punctatus
ENSMFAG00000002117	SMARCA1	94	83.878	ENSIPUG00000005229	SMARCA5	97	82.657	Ictalurus_punctatus
ENSMFAG00000002117	SMARCA1	100	97.333	ENSSTOG00000014524	SMARCA1	100	98.299	Ictidomys_tridecemlineatus
ENSMFAG00000002117	SMARCA1	100	96.545	ENSJJAG00000002593	Smarca1	100	96.545	Jaculus_jaculus
ENSMFAG00000002117	SMARCA1	93	84.803	ENSKMAG00000003777	smarca5	95	82.929	Kryptolebias_marmoratus
ENSMFAG00000002117	SMARCA1	93	83.708	ENSLBEG00000013295	SMARCA1	100	84.829	Labrus_bergylta
ENSMFAG00000002117	SMARCA1	95	83.631	ENSLBEG00000018112	smarca5	95	82.626	Labrus_bergylta
ENSMFAG00000002117	SMARCA1	99	89.257	ENSLACG00000016697	SMARCA1	98	90.190	Latimeria_chalumnae
ENSMFAG00000002117	SMARCA1	97	88.832	ENSLOCG00000014591	smarca1	97	88.855	Lepisosteus_oculatus
ENSMFAG00000002117	SMARCA1	98	96.468	ENSLAFG00000000896	SMARCA1	100	96.720	Loxodonta_africana
ENSMFAG00000002117	SMARCA1	100	100.000	ENSMMUG00000008818	SMARCA1	100	100.000	Macaca_mulatta
ENSMFAG00000002117	SMARCA1	100	100.000	ENSMNEG00000041768	SMARCA1	100	100.000	Macaca_nemestrina
ENSMFAG00000002117	SMARCA1	100	99.907	ENSMLEG00000043198	SMARCA1	100	99.907	Mandrillus_leucophaeus
ENSMFAG00000002117	SMARCA1	94	84.762	ENSMAMG00000014294	smarca5	96	82.583	Mastacembelus_armatus
ENSMFAG00000002117	SMARCA1	94	84.762	ENSMZEG00005009369	smarca5	95	83.165	Maylandia_zebra
ENSMFAG00000002117	SMARCA1	96	92.000	ENSMGAG00000007042	SMARCA1	99	91.494	Meleagris_gallopavo
ENSMFAG00000002117	SMARCA1	100	95.893	ENSMAUG00000008133	Smarca1	100	95.893	Mesocricetus_auratus
ENSMFAG00000002117	SMARCA1	100	98.224	ENSMICG00000015768	SMARCA1	100	98.299	Microcebus_murinus
ENSMFAG00000002117	SMARCA1	100	95.066	ENSMOCG00000009464	Smarca1	100	95.673	Microtus_ochrogaster
ENSMFAG00000002117	SMARCA1	94	82.180	ENSMMOG00000005547	smarca5	99	81.231	Mola_mola
ENSMFAG00000002117	SMARCA1	99	90.120	ENSMODG00000013187	-	99	89.545	Monodelphis_domestica
ENSMFAG00000002117	SMARCA1	95	83.247	ENSMALG00000002081	smarca5	97	82.922	Monopterus_albus
ENSMFAG00000002117	SMARCA1	100	95.893	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.893	Mus_caroli
ENSMFAG00000002117	SMARCA1	100	95.893	ENSMUSG00000031099	Smarca1	100	95.893	Mus_musculus
ENSMFAG00000002117	SMARCA1	100	95.989	MGP_PahariEiJ_G0031579	Smarca1	100	95.989	Mus_pahari
ENSMFAG00000002117	SMARCA1	100	95.989	MGP_SPRETEiJ_G0034192	Smarca1	100	95.989	Mus_spretus
ENSMFAG00000002117	SMARCA1	100	98.224	ENSMPUG00000017423	SMARCA1	98	96.320	Mustela_putorius_furo
ENSMFAG00000002117	SMARCA1	100	94.590	ENSMLUG00000029614	SMARCA1	100	94.030	Myotis_lucifugus
ENSMFAG00000002117	SMARCA1	100	96.657	ENSNGAG00000006492	Smarca1	100	96.657	Nannospalax_galili
ENSMFAG00000002117	SMARCA1	94	84.868	ENSNBRG00000004463	smarca5	99	83.131	Neolamprologus_brichardi
ENSMFAG00000002117	SMARCA1	100	99.159	ENSNLEG00000015179	SMARCA1	100	99.159	Nomascus_leucogenys
ENSMFAG00000002117	SMARCA1	94	81.866	ENSMEUG00000008819	SMARCA1	100	81.866	Notamacropus_eugenii
ENSMFAG00000002117	SMARCA1	100	95.446	ENSODEG00000012163	SMARCA1	99	96.466	Octodon_degus
ENSMFAG00000002117	SMARCA1	94	84.868	ENSONIG00000009993	smarca5	95	83.266	Oreochromis_niloticus
ENSMFAG00000002117	SMARCA1	94	94.093	ENSOANG00000002862	SMARCA1	100	93.827	Ornithorhynchus_anatinus
ENSMFAG00000002117	SMARCA1	99	96.715	ENSOCUG00000001047	SMARCA1	100	96.692	Oryctolagus_cuniculus
ENSMFAG00000002117	SMARCA1	93	84.591	ENSORLG00000021998	smarca5	95	82.828	Oryzias_latipes
ENSMFAG00000002117	SMARCA1	93	84.697	ENSORLG00020017679	smarca5	95	82.929	Oryzias_latipes_hni
ENSMFAG00000002117	SMARCA1	93	84.591	ENSORLG00015017210	smarca5	95	82.727	Oryzias_latipes_hsok
ENSMFAG00000002117	SMARCA1	93	84.591	ENSOMEG00000000086	smarca5	95	82.727	Oryzias_melastigma
ENSMFAG00000002117	SMARCA1	100	97.343	ENSOGAG00000004399	SMARCA1	99	98.376	Otolemur_garnettii
ENSMFAG00000002117	SMARCA1	97	97.077	ENSOARG00000014638	SMARCA1	100	98.878	Ovis_aries
ENSMFAG00000002117	SMARCA1	100	100.000	ENSPPAG00000034647	SMARCA1	100	100.000	Pan_paniscus
ENSMFAG00000002117	SMARCA1	100	98.598	ENSPPRG00000008929	SMARCA1	100	98.677	Panthera_pardus
ENSMFAG00000002117	SMARCA1	97	96.586	ENSPTIG00000000915	SMARCA1	98	97.151	Panthera_tigris_altaica
ENSMFAG00000002117	SMARCA1	100	100.000	ENSPTRG00000049876	SMARCA1	100	100.000	Pan_troglodytes
ENSMFAG00000002117	SMARCA1	100	100.000	ENSPANG00000003871	SMARCA1	100	100.000	Papio_anubis
ENSMFAG00000002117	SMARCA1	97	86.256	ENSPKIG00000013411	smarca1	99	86.256	Paramormyrops_kingsleyae
ENSMFAG00000002117	SMARCA1	97	91.524	ENSPSIG00000010101	SMARCA1	100	93.210	Pelodiscus_sinensis
ENSMFAG00000002117	SMARCA1	100	96.562	ENSPEMG00000017503	Smarca1	100	96.562	Peromyscus_maniculatus_bairdii
ENSMFAG00000002117	SMARCA1	98	92.065	ENSPCIG00000015460	SMARCA1	98	92.192	Phascolarctos_cinereus
ENSMFAG00000002117	SMARCA1	93	84.803	ENSPFOG00000007649	smarca5	95	82.828	Poecilia_formosa
ENSMFAG00000002117	SMARCA1	93	84.803	ENSPLAG00000003363	smarca5	95	82.828	Poecilia_latipinna
ENSMFAG00000002117	SMARCA1	93	84.697	ENSPMEG00000019849	smarca5	95	82.727	Poecilia_mexicana
ENSMFAG00000002117	SMARCA1	93	84.697	ENSPREG00000023250	smarca5	95	82.727	Poecilia_reticulata
ENSMFAG00000002117	SMARCA1	99	97.198	ENSPPYG00000020703	SMARCA1	100	97.259	Pongo_abelii
ENSMFAG00000002117	SMARCA1	81	90.909	ENSPCOG00000020722	SMARCA1	94	93.953	Propithecus_coquereli
ENSMFAG00000002117	SMARCA1	94	95.791	ENSPVAG00000003805	SMARCA1	94	97.297	Pteropus_vampyrus
ENSMFAG00000002117	SMARCA1	58	83.924	ENSPNYG00000012299	smarca5	92	82.933	Pundamilia_nyererei
ENSMFAG00000002117	SMARCA1	99	96.329	ENSRNOG00000003762	Smarca1	100	96.408	Rattus_norvegicus
ENSMFAG00000002117	SMARCA1	100	99.907	ENSRROG00000034167	SMARCA1	100	99.907	Rhinopithecus_roxellana
ENSMFAG00000002117	SMARCA1	99	96.749	ENSSBOG00000020641	SMARCA1	100	99.796	Saimiri_boliviensis_boliviensis
ENSMFAG00000002117	SMARCA1	94	86.856	ENSSHAG00000013518	SMARCA1	99	86.742	Sarcophilus_harrisii
ENSMFAG00000002117	SMARCA1	95	88.854	ENSSFOG00015009043	smarca1	98	87.675	Scleropages_formosus
ENSMFAG00000002117	SMARCA1	95	83.820	ENSSFOG00015016794	smarca5	100	83.814	Scleropages_formosus
ENSMFAG00000002117	SMARCA1	94	83.368	ENSSMAG00000004801	smarca5	95	82.371	Scophthalmus_maximus
ENSMFAG00000002117	SMARCA1	94	84.233	ENSSDUG00000020690	smarca5	96	82.525	Seriola_dumerili
ENSMFAG00000002117	SMARCA1	94	84.233	ENSSLDG00000025190	smarca5	96	82.525	Seriola_lalandi_dorsalis
ENSMFAG00000002117	SMARCA1	90	88.406	ENSSARG00000000842	SMARCA1	87	97.163	Sorex_araneus
ENSMFAG00000002117	SMARCA1	98	91.388	ENSSPUG00000000590	SMARCA1	97	90.070	Sphenodon_punctatus
ENSMFAG00000002117	SMARCA1	94	84.444	ENSSPAG00000002894	smarca5	97	84.026	Stegastes_partitus
ENSMFAG00000002117	SMARCA1	99	97.690	ENSSSCG00000012649	SMARCA1	100	97.690	Sus_scrofa
ENSMFAG00000002117	SMARCA1	94	93.538	ENSTGUG00000003899	-	100	92.770	Taeniopygia_guttata
ENSMFAG00000002117	SMARCA1	94	84.339	ENSTRUG00000014094	smarca5	95	82.727	Takifugu_rubripes
ENSMFAG00000002117	SMARCA1	93	83.493	ENSTNIG00000017717	smarca5	94	81.616	Tetraodon_nigroviridis
ENSMFAG00000002117	SMARCA1	89	96.158	ENSTBEG00000014973	SMARCA1	99	91.304	Tupaia_belangeri
ENSMFAG00000002117	SMARCA1	97	94.052	ENSTTRG00000006168	SMARCA1	99	95.320	Tursiops_truncatus
ENSMFAG00000002117	SMARCA1	99	98.068	ENSUAMG00000020201	SMARCA1	100	98.110	Ursus_americanus
ENSMFAG00000002117	SMARCA1	98	93.737	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSMFAG00000002117	SMARCA1	77	99.683	ENSVPAG00000010492	-	85	99.675	Vicugna_pacos
ENSMFAG00000002117	SMARCA1	97	98.774	ENSVVUG00000008878	SMARCA1	100	98.956	Vulpes_vulpes
ENSMFAG00000002117	SMARCA1	95	90.198	ENSXETG00000001526	smarca1	99	89.347	Xenopus_tropicalis
ENSMFAG00000002117	SMARCA1	94	84.444	ENSXCOG00000011170	smarca5	98	82.727	Xiphophorus_couchianus
ENSMFAG00000002117	SMARCA1	94	84.444	ENSXMAG00000009678	smarca5	98	84.641	Xiphophorus_maculatus