EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000002218 (Gene tree)
Gene ID: 102147306
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 154802 bases
Position: chr5:127049381-127204182
Accession: 102147306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000005102	La	PF05383.17	5e-22	1	1
ENSMFAP00000005126	La	PF05383.17	5.6e-22	1	1
ENSMFAP00000005097	La	PF05383.17	1.1e-21	1	1
ENSMFAP00000005121	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000023768	LARP1B-201	3756	XM_005555904	ENSMFAP00000005097	518 (aa)	XP_005555961	A0A2K5TYG1
ENSMFAT00000023794	LARP1B-203	2742	XM_005555898	ENSMFAP00000005121	913 (aa)	XP_005555955	A0A2K5TYG9
ENSMFAT00000023773	LARP1B-202	2823	XM_005555903	ENSMFAP00000005102	335 (aa)	XP_005555960	A0A2K5TYG6
ENSMFAT00000023799	LARP1B-204	1071	-	ENSMFAP00000005126	356 (aa)	-	A0A2K5TYH4

Gene Model

Click here to download ENSMFAG00000002218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000002218	LARP1B	70	93.258	ENSMFAG00000003306	-	94	93.258
ENSMFAG00000002218	LARP1B	96	59.692	ENSMFAG00000031651	LARP1	87	59.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002218	LARP1B	100	98.263	ENSG00000138709	LARP1B	100	98.263	Homo_sapiens
ENSMFAG00000002218	LARP1B	97	57.343	ENSAPOG00000020101	larp1b	83	57.536	Acanthochromis_polyacanthus
ENSMFAG00000002218	LARP1B	100	92.537	ENSAMEG00000002748	LARP1B	100	92.537	Ailuropoda_melanoleuca
ENSMFAG00000002218	LARP1B	96	55.776	ENSACIG00000023890	larp1b	82	55.169	Amphilophus_citrinellus
ENSMFAG00000002218	LARP1B	97	48.956	ENSAOCG00000014268	larp1b	84	54.850	Amphiprion_ocellaris
ENSMFAG00000002218	LARP1B	98	57.980	ENSAPEG00000004126	larp1b	83	57.872	Amphiprion_percula
ENSMFAG00000002218	LARP1B	99	56.443	ENSATEG00000017849	larp1b	84	56.990	Anabas_testudineus
ENSMFAG00000002218	LARP1B	96	68.908	ENSAPLG00000010129	LARP1B	98	68.985	Anas_platyrhynchos
ENSMFAG00000002218	LARP1B	98	75.758	ENSACAG00000011338	LARP1B	86	78.143	Anolis_carolinensis
ENSMFAG00000002218	LARP1B	99	88.694	ENSANAG00000034618	LARP1B	100	80.672	Aotus_nancymaae
ENSMFAG00000002218	LARP1B	96	56.474	ENSACLG00000011948	larp1b	82	56.405	Astatotilapia_calliptera
ENSMFAG00000002218	LARP1B	84	56.074	ENSAMXG00000006805	larp1b	83	52.532	Astyanax_mexicanus
ENSMFAG00000002218	LARP1B	100	89.727	ENSBTAG00000012135	LARP1B	99	88.269	Bos_taurus
ENSMFAG00000002218	LARP1B	100	97.297	ENSCJAG00000003338	LARP1B	100	97.297	Callithrix_jacchus
ENSMFAG00000002218	LARP1B	100	91.494	ENSCAFG00000003831	LARP1B	100	91.494	Canis_familiaris
ENSMFAG00000002218	LARP1B	100	92.836	ENSCAFG00020018899	LARP1B	100	92.836	Canis_lupus_dingo
ENSMFAG00000002218	LARP1B	100	89.881	ENSCHIG00000023144	LARP1B	100	89.881	Capra_hircus
ENSMFAG00000002218	LARP1B	98	86.018	ENSTSYG00000002037	-	100	82.303	Carlito_syrichta
ENSMFAG00000002218	LARP1B	76	91.071	ENSCPOG00000034668	-	93	91.071	Cavia_porcellus
ENSMFAG00000002218	LARP1B	100	97.490	ENSCCAG00000021948	LARP1B	100	97.490	Cebus_capucinus
ENSMFAG00000002218	LARP1B	100	98.248	ENSCATG00000013541	LARP1B	100	98.248	Cercocebus_atys
ENSMFAG00000002218	LARP1B	100	88.358	ENSCLAG00000006448	-	100	88.358	Chinchilla_lanigera
ENSMFAG00000002218	LARP1B	100	98.799	ENSCSAG00000003582	LARP1B	100	98.799	Chlorocebus_sabaeus
ENSMFAG00000002218	LARP1B	100	81.769	ENSCHOG00000005354	LARP1B	99	81.659	Choloepus_hoffmanni
ENSMFAG00000002218	LARP1B	99	77.571	ENSCPBG00000017480	LARP1B	86	77.790	Chrysemys_picta_bellii
ENSMFAG00000002218	LARP1B	100	93.254	ENSCANG00000026958	LARP1B	100	93.254	Colobus_angolensis_palliatus
ENSMFAG00000002218	LARP1B	100	90.746	ENSCGRG00001004660	-	100	90.746	Cricetulus_griseus_chok1gshd
ENSMFAG00000002218	LARP1B	100	90.448	ENSCGRG00000001914	-	100	90.448	Cricetulus_griseus_crigri
ENSMFAG00000002218	LARP1B	96	53.125	ENSCSEG00000013519	larp1b	85	54.102	Cynoglossus_semilaevis
ENSMFAG00000002218	LARP1B	97	55.854	ENSCVAG00000005046	larp1b	82	56.189	Cyprinodon_variegatus
ENSMFAG00000002218	LARP1B	98	53.341	ENSDARG00000061169	larp1b	79	54.545	Danio_rerio
ENSMFAG00000002218	LARP1B	98	89.970	ENSDNOG00000018765	-	100	88.063	Dasypus_novemcinctus
ENSMFAG00000002218	LARP1B	89	84.874	ENSETEG00000012497	LARP1B	89	84.874	Echinops_telfairi
ENSMFAG00000002218	LARP1B	94	51.299	ENSEBUG00000003668	larp1b	87	52.757	Eptatretus_burgeri
ENSMFAG00000002218	LARP1B	99	93.413	ENSEASG00005018106	LARP1B	99	93.413	Equus_asinus_asinus
ENSMFAG00000002218	LARP1B	98	93.313	ENSECAG00000001088	LARP1B	81	89.606	Equus_caballus
ENSMFAG00000002218	LARP1B	70	53.939	ENSELUG00000023774	larp1b	72	53.939	Esox_lucius
ENSMFAG00000002218	LARP1B	100	92.537	ENSFCAG00000014650	-	100	92.537	Felis_catus
ENSMFAG00000002218	LARP1B	100	69.022	ENSFALG00000008098	LARP1B	99	70.217	Ficedula_albicollis
ENSMFAG00000002218	LARP1B	98	56.170	ENSFHEG00000010264	larp1b	80	56.337	Fundulus_heteroclitus
ENSMFAG00000002218	LARP1B	83	67.007	ENSGMOG00000005207	larp1b	62	68.707	Gadus_morhua
ENSMFAG00000002218	LARP1B	98	70.517	ENSGALG00000010207	LARP1B	87	69.637	Gallus_gallus
ENSMFAG00000002218	LARP1B	91	58.469	ENSGAFG00000012012	larp1b	93	58.741	Gambusia_affinis
ENSMFAG00000002218	LARP1B	97	52.406	ENSGACG00000004609	larp1b	83	54.759	Gasterosteus_aculeatus
ENSMFAG00000002218	LARP1B	99	77.402	ENSGAGG00000017209	LARP1B	85	77.620	Gopherus_agassizii
ENSMFAG00000002218	LARP1B	100	98.456	ENSGGOG00000015900	LARP1B	100	98.456	Gorilla_gorilla
ENSMFAG00000002218	LARP1B	96	56.598	ENSHBUG00000009730	larp1b	82	56.526	Haplochromis_burtoni
ENSMFAG00000002218	LARP1B	100	86.431	ENSHGLG00000006728	-	99	86.726	Heterocephalus_glaber_female
ENSMFAG00000002218	LARP1B	97	75.153	ENSHGLG00000013922	-	96	74.312	Heterocephalus_glaber_female
ENSMFAG00000002218	LARP1B	97	75.153	ENSHGLG00100016491	-	96	74.312	Heterocephalus_glaber_male
ENSMFAG00000002218	LARP1B	100	87.164	ENSHGLG00100014041	-	99	87.087	Heterocephalus_glaber_male
ENSMFAG00000002218	LARP1B	76	59.716	ENSHCOG00000000918	larp1b	96	60.426	Hippocampus_comes
ENSMFAG00000002218	LARP1B	87	59.036	ENSIPUG00000012138	larp1b	80	55.128	Ictalurus_punctatus
ENSMFAG00000002218	LARP1B	96	74.143	ENSSTOG00000034510	-	92	70.725	Ictidomys_tridecemlineatus
ENSMFAG00000002218	LARP1B	100	89.583	ENSSTOG00000008596	-	100	89.583	Ictidomys_tridecemlineatus
ENSMFAG00000002218	LARP1B	91	67.320	ENSSTOG00000033183	-	97	66.443	Ictidomys_tridecemlineatus
ENSMFAG00000002218	LARP1B	99	79.154	ENSSTOG00000021917	-	94	80.243	Ictidomys_tridecemlineatus
ENSMFAG00000002218	LARP1B	99	86.787	ENSJJAG00000022360	Larp1b	99	86.787	Jaculus_jaculus
ENSMFAG00000002218	LARP1B	96	54.885	ENSKMAG00000011589	larp1b	84	55.616	Kryptolebias_marmoratus
ENSMFAG00000002218	LARP1B	97	56.850	ENSLBEG00000005655	larp1b	83	56.531	Labrus_bergylta
ENSMFAG00000002218	LARP1B	99	72.057	ENSLACG00000015247	LARP1B	100	69.466	Latimeria_chalumnae
ENSMFAG00000002218	LARP1B	99	64.067	ENSLOCG00000010684	larp1b	93	65.648	Lepisosteus_oculatus
ENSMFAG00000002218	LARP1B	99	92.262	ENSLAFG00000008473	-	99	92.771	Loxodonta_africana
ENSMFAG00000002218	LARP1B	100	100.000	ENSMMUG00000021347	LARP1B	100	100.000	Macaca_mulatta
ENSMFAG00000002218	LARP1B	91	100.000	ENSMNEG00000030406	LARP1B	100	100.000	Macaca_nemestrina
ENSMFAG00000002218	LARP1B	65	94.595	ENSMNEG00000027747	-	94	93.706	Macaca_nemestrina
ENSMFAG00000002218	LARP1B	100	95.290	ENSMLEG00000009306	LARP1B	100	95.290	Mandrillus_leucophaeus
ENSMFAG00000002218	LARP1B	99	56.554	ENSMAMG00000000081	larp1b	85	56.660	Mastacembelus_armatus
ENSMFAG00000002218	LARP1B	76	62.410	ENSMZEG00005002545	larp1b	94	61.075	Maylandia_zebra
ENSMFAG00000002218	LARP1B	94	63.415	ENSMGAG00000004809	LARP1B	98	63.425	Meleagris_gallopavo
ENSMFAG00000002218	LARP1B	100	89.851	ENSMAUG00000007879	-	100	89.851	Mesocricetus_auratus
ENSMFAG00000002218	LARP1B	100	94.627	ENSMICG00000036111	LARP1B	100	94.627	Microcebus_murinus
ENSMFAG00000002218	LARP1B	98	78.125	ENSMICG00000037883	-	96	78.125	Microcebus_murinus
ENSMFAG00000002218	LARP1B	98	71.176	ENSMICG00000028052	-	99	71.542	Microcebus_murinus
ENSMFAG00000002218	LARP1B	79	92.015	ENSMOCG00000001490	Larp1b	95	92.015	Microtus_ochrogaster
ENSMFAG00000002218	LARP1B	99	86.041	ENSMODG00000012300	LARP1B	81	86.587	Monodelphis_domestica
ENSMFAG00000002218	LARP1B	99	56.429	ENSMALG00000003638	larp1b	84	57.127	Monopterus_albus
ENSMFAG00000002218	LARP1B	100	88.657	MGP_CAROLIEiJ_G0024962	Larp1b	100	88.657	Mus_caroli
ENSMFAG00000002218	LARP1B	100	89.851	ENSMUSG00000025762	Larp1b	100	89.851	Mus_musculus
ENSMFAG00000002218	LARP1B	100	89.552	MGP_PahariEiJ_G0026403	Larp1b	100	89.552	Mus_pahari
ENSMFAG00000002218	LARP1B	100	89.851	MGP_SPRETEiJ_G0025897	Larp1b	100	89.851	Mus_spretus
ENSMFAG00000002218	LARP1B	98	93.313	ENSMPUG00000017365	LARP1B	81	90.700	Mustela_putorius_furo
ENSMFAG00000002218	LARP1B	96	83.187	ENSMLUG00000010229	LARP1B	97	83.187	Myotis_lucifugus
ENSMFAG00000002218	LARP1B	76	57.328	ENSNBRG00000023846	larp1b	77	56.494	Neolamprologus_brichardi
ENSMFAG00000002218	LARP1B	100	98.649	ENSNLEG00000013819	LARP1B	100	98.649	Nomascus_leucogenys
ENSMFAG00000002218	LARP1B	87	83.654	ENSMEUG00000010308	LARP1B	88	83.654	Notamacropus_eugenii
ENSMFAG00000002218	LARP1B	98	73.860	ENSOPRG00000005478	LARP1B	99	71.725	Ochotona_princeps
ENSMFAG00000002218	LARP1B	100	88.060	ENSODEG00000001292	-	100	88.060	Octodon_degus
ENSMFAG00000002218	LARP1B	96	55.961	ENSONIG00000012386	larp1b	93	55.520	Oreochromis_niloticus
ENSMFAG00000002218	LARP1B	98	92.705	ENSOCUG00000013330	LARP1B	98	88.184	Oryctolagus_cuniculus
ENSMFAG00000002218	LARP1B	97	56.230	ENSORLG00000017954	larp1b	82	56.352	Oryzias_latipes
ENSMFAG00000002218	LARP1B	97	55.905	ENSORLG00020013081	larp1b	82	55.796	Oryzias_latipes_hni
ENSMFAG00000002218	LARP1B	97	56.135	ENSORLG00015009580	larp1b	82	56.135	Oryzias_latipes_hsok
ENSMFAG00000002218	LARP1B	97	55.844	ENSOMEG00000004210	larp1b	82	55.952	Oryzias_melastigma
ENSMFAG00000002218	LARP1B	99	89.864	ENSOGAG00000005771	LARP1B	98	89.817	Otolemur_garnettii
ENSMFAG00000002218	LARP1B	100	89.410	ENSOARG00000015300	LARP1B	100	89.410	Ovis_aries
ENSMFAG00000002218	LARP1B	100	97.910	ENSPPAG00000030439	LARP1B	100	97.910	Pan_paniscus
ENSMFAG00000002218	LARP1B	100	92.537	ENSPPRG00000002743	-	100	92.537	Panthera_pardus
ENSMFAG00000002218	LARP1B	100	92.537	ENSPTIG00000011225	LARP1B	100	92.537	Panthera_tigris_altaica
ENSMFAG00000002218	LARP1B	100	98.069	ENSPTRG00000016437	LARP1B	100	98.069	Pan_troglodytes
ENSMFAG00000002218	LARP1B	100	99.719	ENSPANG00000012488	LARP1B	100	99.719	Papio_anubis
ENSMFAG00000002218	LARP1B	90	53.846	ENSPKIG00000014360	larp1b	88	53.837	Paramormyrops_kingsleyae
ENSMFAG00000002218	LARP1B	99	75.435	ENSPSIG00000012885	LARP1B	93	77.639	Pelodiscus_sinensis
ENSMFAG00000002218	LARP1B	79	60.385	ENSPMGG00000007207	larp1b	84	60.385	Periophthalmus_magnuspinnatus
ENSMFAG00000002218	LARP1B	94	52.323	ENSPMAG00000002700	larp1b	94	53.579	Petromyzon_marinus
ENSMFAG00000002218	LARP1B	99	84.967	ENSPCIG00000026516	LARP1B	98	85.428	Phascolarctos_cinereus
ENSMFAG00000002218	LARP1B	98	51.560	ENSPFOG00000022837	-	78	51.193	Poecilia_formosa
ENSMFAG00000002218	LARP1B	97	56.572	ENSPFOG00000019519	larp1b	82	56.257	Poecilia_formosa
ENSMFAG00000002218	LARP1B	97	57.530	ENSPLAG00000007115	larp1b	82	57.313	Poecilia_latipinna
ENSMFAG00000002218	LARP1B	97	57.313	ENSPMEG00000001224	larp1b	81	56.988	Poecilia_mexicana
ENSMFAG00000002218	LARP1B	84	52.050	ENSPREG00000005955	-	97	51.735	Poecilia_reticulata
ENSMFAG00000002218	LARP1B	98	87.234	ENSPCAG00000007546	LARP1B	99	85.027	Procavia_capensis
ENSMFAG00000002218	LARP1B	100	93.731	ENSPCOG00000021874	LARP1B	99	95.172	Propithecus_coquereli
ENSMFAG00000002218	LARP1B	100	83.680	ENSPVAG00000005373	LARP1B	99	83.680	Pteropus_vampyrus
ENSMFAG00000002218	LARP1B	76	62.356	ENSPNYG00000017357	larp1b	94	61.075	Pundamilia_nyererei
ENSMFAG00000002218	LARP1B	96	53.830	ENSPNAG00000008823	larp1b	84	55.496	Pygocentrus_nattereri
ENSMFAG00000002218	LARP1B	100	91.045	ENSRNOG00000038366	Larp1b	100	91.045	Rattus_norvegicus
ENSMFAG00000002218	LARP1B	100	97.683	ENSRBIG00000039982	-	100	97.683	Rhinopithecus_bieti
ENSMFAG00000002218	LARP1B	100	89.552	ENSRBIG00000038568	-	92	89.552	Rhinopithecus_bieti
ENSMFAG00000002218	LARP1B	100	79.403	ENSRROG00000038525	-	96	79.403	Rhinopithecus_roxellana
ENSMFAG00000002218	LARP1B	100	99.614	ENSRROG00000030771	LARP1B	100	99.614	Rhinopithecus_roxellana
ENSMFAG00000002218	LARP1B	98	87.879	ENSSHAG00000014474	LARP1B	100	85.373	Sarcophilus_harrisii
ENSMFAG00000002218	LARP1B	96	56.000	ENSSMAG00000006347	larp1b	91	55.650	Scophthalmus_maximus
ENSMFAG00000002218	LARP1B	96	57.252	ENSSDUG00000004182	larp1b	82	56.989	Seriola_dumerili
ENSMFAG00000002218	LARP1B	78	60.417	ENSSLDG00000014613	larp1b	71	60.000	Seriola_lalandi_dorsalis
ENSMFAG00000002218	LARP1B	98	74.464	ENSSPUG00000011837	LARP1B	97	68.950	Sphenodon_punctatus
ENSMFAG00000002218	LARP1B	97	56.789	ENSSPAG00000017772	larp1b	82	56.681	Stegastes_partitus
ENSMFAG00000002218	LARP1B	98	91.489	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSMFAG00000002218	LARP1B	73	55.967	ENSSSCG00000040491	-	99	75.862	Sus_scrofa
ENSMFAG00000002218	LARP1B	89	70.687	ENSTGUG00000002098	-	96	67.691	Taeniopygia_guttata
ENSMFAG00000002218	LARP1B	98	54.089	ENSTRUG00000005612	larp1b	82	54.031	Takifugu_rubripes
ENSMFAG00000002218	LARP1B	96	53.560	ENSTNIG00000012398	larp1b	94	54.565	Tetraodon_nigroviridis
ENSMFAG00000002218	LARP1B	87	90.385	ENSTBEG00000004177	LARP1B	88	84.615	Tupaia_belangeri
ENSMFAG00000002218	LARP1B	100	80.546	ENSTTRG00000012984	LARP1B	99	80.546	Tursiops_truncatus
ENSMFAG00000002218	LARP1B	100	81.791	ENSUAMG00000016938	-	100	81.250	Ursus_americanus
ENSMFAG00000002218	LARP1B	100	91.138	ENSUMAG00000007373	LARP1B	98	91.138	Ursus_maritimus
ENSMFAG00000002218	LARP1B	99	79.297	ENSVPAG00000007223	LARP1B	99	78.256	Vicugna_pacos
ENSMFAG00000002218	LARP1B	100	91.357	ENSVVUG00000011307	LARP1B	100	91.176	Vulpes_vulpes
ENSMFAG00000002218	LARP1B	97	60.908	ENSXETG00000022512	larp1b	87	60.687	Xenopus_tropicalis
ENSMFAG00000002218	LARP1B	73	59.496	ENSXCOG00000004435	larp1b	68	59.851	Xiphophorus_couchianus
ENSMFAG00000002218	LARP1B	97	57.235	ENSXMAG00000008150	larp1b	81	57.127	Xiphophorus_maculatus