EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000002266 (Gene tree)
Gene ID: 101926566
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 10846 bases
Position: chr11:87725132-87735977
Accession: 101926566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000005187	MBD	PF01429.19	9.9e-21	1	1
ENSMFAP00000005208	MBD	PF01429.19	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000023860	MBD4-201	3577	XM_005571720	ENSMFAP00000005187	572 (aa)	XP_005571777	A0A2K5TYQ4
ENSMFAT00000023881	MBD4-202	1509	-	ENSMFAP00000005208	502 (aa)	-	A0A2K5TYP8

Gene Model

Click here to download ENSMFAG00000002266's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002266	MBD4	100	93.391	ENSG00000129071	MBD4	100	93.391	Homo_sapiens
ENSMFAG00000002266	MBD4	99	75.563	ENSAMEG00000004562	MBD4	99	75.563	Ailuropoda_melanoleuca
ENSMFAG00000002266	MBD4	53	59.916	ENSAOCG00000001157	mbd4	62	59.916	Amphiprion_ocellaris
ENSMFAG00000002266	MBD4	99	70.804	ENSBTAG00000021645	MBD4	99	70.804	Bos_taurus
ENSMFAG00000002266	MBD4	100	85.838	ENSCJAG00000017293	MBD4	100	85.838	Callithrix_jacchus
ENSMFAG00000002266	MBD4	99	75.521	ENSCAFG00000004867	MBD4	99	75.521	Canis_familiaris
ENSMFAG00000002266	MBD4	99	75.521	ENSCAFG00020007082	MBD4	99	75.521	Canis_lupus_dingo
ENSMFAG00000002266	MBD4	99	69.580	ENSCHIG00000009760	MBD4	99	69.580	Capra_hircus
ENSMFAG00000002266	MBD4	100	86.874	ENSCCAG00000029796	MBD4	100	86.874	Cebus_capucinus
ENSMFAG00000002266	MBD4	100	98.252	ENSCATG00000035211	MBD4	100	98.252	Cercocebus_atys
ENSMFAG00000002266	MBD4	98	68.838	ENSCLAG00000008974	MBD4	99	68.486	Chinchilla_lanigera
ENSMFAG00000002266	MBD4	100	97.552	ENSCSAG00000009037	MBD4	100	97.552	Chlorocebus_sabaeus
ENSMFAG00000002266	MBD4	70	87.023	ENSCPBG00000014704	MBD4	65	87.023	Chrysemys_picta_bellii
ENSMFAG00000002266	MBD4	100	96.853	ENSCANG00000007120	MBD4	100	96.853	Colobus_angolensis_palliatus
ENSMFAG00000002266	MBD4	99	67.426	ENSCGRG00001003507	Mbd4	99	67.426	Cricetulus_griseus_chok1gshd
ENSMFAG00000002266	MBD4	99	67.426	ENSCGRG00000010974	Mbd4	99	67.426	Cricetulus_griseus_crigri
ENSMFAG00000002266	MBD4	99	76.842	ENSDNOG00000049619	MBD4	99	76.842	Dasypus_novemcinctus
ENSMFAG00000002266	MBD4	80	63.169	ENSDORG00000000902	-	95	63.169	Dipodomys_ordii
ENSMFAG00000002266	MBD4	99	77.972	ENSEASG00005014800	MBD4	99	77.972	Equus_asinus_asinus
ENSMFAG00000002266	MBD4	99	77.972	ENSECAG00000022106	MBD4	99	77.972	Equus_caballus
ENSMFAG00000002266	MBD4	95	60.291	ENSEEUG00000011459	MBD4	99	60.291	Erinaceus_europaeus
ENSMFAG00000002266	MBD4	99	76.990	ENSFCAG00000000083	MBD4	99	76.990	Felis_catus
ENSMFAG00000002266	MBD4	61	81.061	ENSFALG00000013663	MBD4	67	81.061	Ficedula_albicollis
ENSMFAG00000002266	MBD4	70	87.786	ENSGAGG00000018644	MBD4	65	87.786	Gopherus_agassizii
ENSMFAG00000002266	MBD4	100	91.910	ENSGGOG00000010698	MBD4	100	91.910	Gorilla_gorilla
ENSMFAG00000002266	MBD4	98	71.831	ENSHGLG00000009034	MBD4	99	71.831	Heterocephalus_glaber_female
ENSMFAG00000002266	MBD4	98	71.831	ENSHGLG00100000135	MBD4	99	71.831	Heterocephalus_glaber_male
ENSMFAG00000002266	MBD4	99	72.487	ENSSTOG00000020663	MBD4	99	72.487	Ictidomys_tridecemlineatus
ENSMFAG00000002266	MBD4	99	74.306	ENSLAFG00000010609	MBD4	99	74.306	Loxodonta_africana
ENSMFAG00000002266	MBD4	100	99.801	ENSMMUG00000012723	MBD4	100	99.801	Macaca_mulatta
ENSMFAG00000002266	MBD4	96	99.453	ENSMNEG00000029752	MBD4	99	99.453	Macaca_nemestrina
ENSMFAG00000002266	MBD4	100	98.077	ENSMLEG00000024859	MBD4	100	98.077	Mandrillus_leucophaeus
ENSMFAG00000002266	MBD4	100	79.620	ENSMICG00000008022	MBD4	100	79.620	Microcebus_murinus
ENSMFAG00000002266	MBD4	75	50.394	ENSMOCG00000002466	-	99	49.869	Microtus_ochrogaster
ENSMFAG00000002266	MBD4	86	58.929	ENSMODG00000006399	-	99	58.964	Monodelphis_domestica
ENSMFAG00000002266	MBD4	99	66.375	MGP_CAROLIEiJ_G0028760	Mbd4	99	66.375	Mus_caroli
ENSMFAG00000002266	MBD4	99	66.550	ENSMUSG00000030322	Mbd4	99	66.550	Mus_musculus
ENSMFAG00000002266	MBD4	99	67.483	MGP_PahariEiJ_G0022511	-	99	67.483	Mus_pahari
ENSMFAG00000002266	MBD4	99	65.849	MGP_SPRETEiJ_G0029788	Mbd4	99	65.849	Mus_spretus
ENSMFAG00000002266	MBD4	99	75.044	ENSMPUG00000017195	MBD4	99	75.044	Mustela_putorius_furo
ENSMFAG00000002266	MBD4	92	78.731	ENSMLUG00000014766	MBD4	97	78.977	Myotis_lucifugus
ENSMFAG00000002266	MBD4	100	91.883	ENSNLEG00000005337	MBD4	100	91.883	Nomascus_leucogenys
ENSMFAG00000002266	MBD4	99	63.731	ENSOPRG00000000473	MBD4	99	63.731	Ochotona_princeps
ENSMFAG00000002266	MBD4	85	39.469	ENSONIG00000017212	mbd4	50	79.532	Oreochromis_niloticus
ENSMFAG00000002266	MBD4	72	46.572	ENSOANG00000004589	-	89	48.974	Ornithorhynchus_anatinus
ENSMFAG00000002266	MBD4	99	66.495	ENSOCUG00000013006	MBD4	100	66.495	Oryctolagus_cuniculus
ENSMFAG00000002266	MBD4	99	75.436	ENSOGAG00000010236	MBD4	99	75.087	Otolemur_garnettii
ENSMFAG00000002266	MBD4	99	69.755	ENSOARG00000014699	MBD4	99	69.755	Ovis_aries
ENSMFAG00000002266	MBD4	100	93.043	ENSPPAG00000036528	MBD4	100	93.043	Pan_paniscus
ENSMFAG00000002266	MBD4	99	77.098	ENSPPRG00000016480	MBD4	99	77.098	Panthera_pardus
ENSMFAG00000002266	MBD4	100	91.910	ENSPTRG00000015377	MBD4	100	91.910	Pan_troglodytes
ENSMFAG00000002266	MBD4	100	97.610	ENSPANG00000015047	MBD4	100	97.610	Papio_anubis
ENSMFAG00000002266	MBD4	65	83.824	ENSPSIG00000007892	MBD4	59	83.824	Pelodiscus_sinensis
ENSMFAG00000002266	MBD4	90	61.686	ENSPEMG00000006226	Mbd4	97	61.686	Peromyscus_maniculatus_bairdii
ENSMFAG00000002266	MBD4	89	58.004	ENSPCIG00000002276	-	98	58.004	Phascolarctos_cinereus
ENSMFAG00000002266	MBD4	100	92.321	ENSPPYG00000013417	MBD4	100	92.321	Pongo_abelii
ENSMFAG00000002266	MBD4	95	70.705	ENSPCAG00000012915	MBD4	99	70.705	Procavia_capensis
ENSMFAG00000002266	MBD4	99	77.990	ENSPVAG00000005238	MBD4	99	77.643	Pteropus_vampyrus
ENSMFAG00000002266	MBD4	99	66.725	ENSRNOG00000010919	Mbd4	99	66.725	Rattus_norvegicus
ENSMFAG00000002266	MBD4	100	97.378	ENSRBIG00000027722	MBD4	100	97.378	Rhinopithecus_bieti
ENSMFAG00000002266	MBD4	100	97.028	ENSRROG00000029136	MBD4	100	97.028	Rhinopithecus_roxellana
ENSMFAG00000002266	MBD4	99	87.326	ENSSBOG00000016810	MBD4	100	86.806	Saimiri_boliviensis_boliviensis
ENSMFAG00000002266	MBD4	93	56.204	ENSSHAG00000012953	MBD4	92	56.586	Sarcophilus_harrisii
ENSMFAG00000002266	MBD4	85	43.676	ENSSFOG00015016292	mbd4	95	43.676	Scleropages_formosus
ENSMFAG00000002266	MBD4	80	61.803	ENSSARG00000004496	-	80	61.803	Sorex_araneus
ENSMFAG00000002266	MBD4	69	86.154	ENSSPUG00000017344	MBD4	67	86.154	Sphenodon_punctatus
ENSMFAG00000002266	MBD4	99	74.825	ENSSSCG00000033303	MBD4	99	74.825	Sus_scrofa
ENSMFAG00000002266	MBD4	84	40.000	ENSTRUG00000010124	mbd4	53	74.706	Takifugu_rubripes
ENSMFAG00000002266	MBD4	85	39.235	ENSTNIG00000017927	mbd4	58	64.398	Tetraodon_nigroviridis
ENSMFAG00000002266	MBD4	95	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSMFAG00000002266	MBD4	97	75.532	ENSTTRG00000011265	MBD4	100	75.532	Tursiops_truncatus
ENSMFAG00000002266	MBD4	86	78.357	ENSUAMG00000000814	MBD4	99	78.357	Ursus_americanus
ENSMFAG00000002266	MBD4	99	76.399	ENSUMAG00000017542	MBD4	99	76.399	Ursus_maritimus
ENSMFAG00000002266	MBD4	60	95.238	ENSVPAG00000004040	-	55	95.238	Vicugna_pacos
ENSMFAG00000002266	MBD4	99	75.174	ENSVVUG00000014222	MBD4	99	75.174	Vulpes_vulpes
ENSMFAG00000002266	MBD4	83	43.207	ENSXETG00000026622	mbd4	89	42.731	Xenopus_tropicalis