EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000002331 (Gene tree)
Gene ID: 102127357
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3D
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 11242 bases
Position: chr10:12186622-12197863
Accession: 102127357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000005320	APOBEC_N	PF08210.11	1.8e-108	1	2
ENSMFAP00000005320	APOBEC_N	PF08210.11	1.8e-108	2	2
ENSMFAP00000005320	APOBEC_C	PF05240.14	1.5e-63	1	2
ENSMFAP00000005320	APOBEC_C	PF05240.14	1.5e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000023994	-	1610	XM_005567248	ENSMFAP00000005320	374 (aa)	XP_005567305	A0A2K5TZ28

Gene Model

Click here to download ENSMFAG00000002331's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000002331	-	100	63.830	ENSMFAG00000008980	APOBEC3A	98	63.830
ENSMFAG00000002331	-	100	76.471	ENSMFAG00000004037	APOBEC3F	100	76.471
ENSMFAG00000002331	-	84	34.737	ENSMFAG00000031827	APOBEC3H	92	32.886
ENSMFAG00000002331	-	99	42.931	ENSMFAG00000044711	APOBEC3G	89	42.188
ENSMFAG00000002331	-	95	40.223	ENSMFAG00000037834	AICDA	94	39.716
ENSMFAG00000002331	-	98	34.000	ENSMFAG00000044645	APOBEC2	88	34.000
ENSMFAG00000002331	-	100	74.731	ENSMFAG00000016792	APOBEC3C	100	74.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002331	-	100	76.344	ENSG00000244509	APOBEC3C	100	76.344	Homo_sapiens
ENSMFAG00000002331	-	100	76.882	ENSG00000243811	APOBEC3D	100	76.882	Homo_sapiens
ENSMFAG00000002331	-	100	76.738	ENSG00000128394	APOBEC3F	100	76.738	Homo_sapiens
ENSMFAG00000002331	-	100	71.658	ENSANAG00000030088	-	99	71.658	Aotus_nancymaae
ENSMFAG00000002331	-	70	67.424	ENSCJAG00000015317	-	100	67.424	Callithrix_jacchus
ENSMFAG00000002331	-	94	50.802	ENSCAFG00020002615	-	99	50.802	Canis_lupus_dingo
ENSMFAG00000002331	-	97	56.831	ENSTSYG00000028254	-	99	56.831	Carlito_syrichta
ENSMFAG00000002331	-	100	54.645	ENSTSYG00000034260	-	98	54.645	Carlito_syrichta
ENSMFAG00000002331	-	98	50.820	ENSTSYG00000030036	-	99	50.820	Carlito_syrichta
ENSMFAG00000002331	-	99	66.154	ENSCCAG00000030932	-	86	66.154	Cebus_capucinus
ENSMFAG00000002331	-	100	73.656	ENSCATG00000043226	APOBEC3C	100	73.656	Cercocebus_atys
ENSMFAG00000002331	-	100	83.146	ENSCATG00000033502	-	100	81.989	Cercocebus_atys
ENSMFAG00000002331	-	100	82.353	ENSCSAG00000006382	APOBEC3F	100	82.353	Chlorocebus_sabaeus
ENSMFAG00000002331	-	100	75.269	ENSCSAG00000006402	APOBEC3C	100	75.269	Chlorocebus_sabaeus
ENSMFAG00000002331	-	100	82.620	ENSCANG00000031957	-	100	82.620	Colobus_angolensis_palliatus
ENSMFAG00000002331	-	100	75.269	ENSCANG00000039177	APOBEC3C	100	75.269	Colobus_angolensis_palliatus
ENSMFAG00000002331	-	98	76.630	ENSCANG00000033269	-	99	76.630	Colobus_angolensis_palliatus
ENSMFAG00000002331	-	100	78.342	ENSCANG00000032904	-	100	78.342	Colobus_angolensis_palliatus
ENSMFAG00000002331	-	95	36.785	ENSDNOG00000044642	-	99	36.785	Dasypus_novemcinctus
ENSMFAG00000002331	-	100	46.429	ENSEASG00005018641	-	100	46.429	Equus_asinus_asinus
ENSMFAG00000002331	-	99	48.108	ENSECAG00000006071	-	100	44.809	Equus_caballus
ENSMFAG00000002331	-	100	76.882	ENSGGOG00000036587	-	100	76.882	Gorilla_gorilla
ENSMFAG00000002331	-	100	77.807	ENSGGOG00000038678	APOBEC3F	100	77.807	Gorilla_gorilla
ENSMFAG00000002331	-	99	47.150	ENSHGLG00000017315	-	95	47.150	Heterocephalus_glaber_female
ENSMFAG00000002331	-	99	47.150	ENSHGLG00100003105	-	95	47.150	Heterocephalus_glaber_male
ENSMFAG00000002331	-	100	91.392	ENSMMUG00000004017	APOBEC3F	100	91.392	Macaca_mulatta
ENSMFAG00000002331	-	98	75.543	ENSMMUG00000004018	APOBEC3C	95	75.543	Macaca_mulatta
ENSMFAG00000002331	-	100	93.165	ENSMNEG00000043316	APOBEC3D	100	93.165	Macaca_nemestrina
ENSMFAG00000002331	-	100	74.731	ENSMNEG00000045196	APOBEC3C	100	74.731	Macaca_nemestrina
ENSMFAG00000002331	-	100	73.656	ENSMLEG00000036992	APOBEC3C	100	73.656	Mandrillus_leucophaeus
ENSMFAG00000002331	-	100	77.807	ENSMLEG00000029642	APOBEC3F	100	77.807	Mandrillus_leucophaeus
ENSMFAG00000002331	-	99	52.880	ENSMICG00000042615	-	91	52.880	Microcebus_murinus
ENSMFAG00000002331	-	99	44.268	ENSMLUG00000023676	-	99	44.268	Myotis_lucifugus
ENSMFAG00000002331	-	100	75.130	ENSNLEG00000035811	-	100	75.130	Nomascus_leucogenys
ENSMFAG00000002331	-	100	73.118	ENSNLEG00000028392	APOBEC3C	100	73.118	Nomascus_leucogenys
ENSMFAG00000002331	-	99	47.568	ENSOGAG00000032498	-	99	47.568	Otolemur_garnettii
ENSMFAG00000002331	-	99	44.974	ENSOGAG00000030300	-	99	44.974	Otolemur_garnettii
ENSMFAG00000002331	-	96	41.808	ENSOGAG00000033404	-	99	41.808	Otolemur_garnettii
ENSMFAG00000002331	-	100	77.419	ENSPPAG00000014118	APOBEC3C	100	77.419	Pan_paniscus
ENSMFAG00000002331	-	99	76.899	ENSPPAG00000028218	-	98	76.899	Pan_paniscus
ENSMFAG00000002331	-	99	47.312	ENSPPRG00000003726	-	98	47.312	Panthera_pardus
ENSMFAG00000002331	-	100	74.352	ENSPTRG00000041588	APOBEC3D	100	74.352	Pan_troglodytes
ENSMFAG00000002331	-	100	77.273	ENSPTRG00000014385	APOBEC3C	100	77.273	Pan_troglodytes
ENSMFAG00000002331	-	100	77.273	ENSPANG00000010775	APOBEC3F	100	77.961	Papio_anubis
ENSMFAG00000002331	-	100	73.656	ENSPPYG00000011832	APOBEC3C	100	73.656	Pongo_abelii
ENSMFAG00000002331	-	68	55.039	ENSPCOG00000022067	-	98	55.039	Propithecus_coquereli
ENSMFAG00000002331	-	69	53.968	ENSPCOG00000018072	-	100	53.968	Propithecus_coquereli
ENSMFAG00000002331	-	80	48.333	ENSPVAG00000009461	-	71	48.333	Pteropus_vampyrus
ENSMFAG00000002331	-	100	79.570	ENSRBIG00000030323	-	100	79.570	Rhinopithecus_bieti
ENSMFAG00000002331	-	100	72.460	ENSRBIG00000042297	-	99	78.344	Rhinopithecus_bieti
ENSMFAG00000002331	-	100	83.770	ENSRBIG00000030834	-	100	83.770	Rhinopithecus_bieti
ENSMFAG00000002331	-	100	72.460	ENSRROG00000029996	-	100	72.460	Rhinopithecus_roxellana
ENSMFAG00000002331	-	100	79.570	ENSRROG00000029045	APOBEC3C	100	79.570	Rhinopithecus_roxellana
ENSMFAG00000002331	-	100	84.225	ENSRROG00000028557	-	100	84.225	Rhinopithecus_roxellana
ENSMFAG00000002331	-	99	70.261	ENSSBOG00000032780	-	100	70.261	Saimiri_boliviensis_boliviensis
ENSMFAG00000002331	-	92	50.311	ENSUAMG00000004433	-	100	50.311	Ursus_americanus
ENSMFAG00000002331	-	93	51.220	ENSUMAG00000014441	-	86	51.220	Ursus_maritimus
ENSMFAG00000002331	-	78	53.020	ENSVVUG00000014628	-	91	52.740	Vulpes_vulpes