EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000002758 (Gene tree)
Gene ID: 102142186
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 8989 bases
Position: chr19:36084234-36093222
Accession: 102142186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000035629	RRM_1	PF00076.22	9.1e-18	1	1
ENSMFAP00000035541	RRM_1	PF00076.22	9.9e-18	1	1
ENSMFAP00000035625	RRM_1	PF00076.22	1e-17	1	1
ENSMFAP00000035498	RRM_1	PF00076.22	1.1e-17	1	1
ENSMFAP00000035564	RRM_1	PF00076.22	1.1e-17	1	1
ENSMFAP00000035647	RRM_1	PF00076.22	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000009781	RBM42-202	1622	XM_005588873	ENSMFAP00000035541	451 (aa)	XP_005588930	A0A2K5WEJ6
ENSMFAT00000009886	RBM42-207	555	-	ENSMFAP00000035647	184 (aa)	-	A0A2K5WEU0
ENSMFAT00000009803	RBM42-203	1707	XM_005588871	ENSMFAP00000035564	480 (aa)	XP_005588928	A0A2K5WEL2
ENSMFAT00000009864	RBM42-204	1377	-	ENSMFAP00000035625	458 (aa)	-	A0A2K5WET5
ENSMFAT00000009870	RBM42-206	1161	-	ENSMFAP00000035631	386 (aa)	-	A0A2K5WES7
ENSMFAT00000009736	RBM42-201	1425	-	ENSMFAP00000035498	474 (aa)	-	A0A2K5WEE4
ENSMFAT00000009868	RBM42-205	1281	-	ENSMFAP00000035629	426 (aa)	-	A0A2K5WEZ9

Gene Model

Click here to download ENSMFAG00000002758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002758	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSMFAG00000002758	RBM42	100	97.510	ENSAMEG00000000524	RBM42	100	97.510	Ailuropoda_melanoleuca
ENSMFAG00000002758	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSMFAG00000002758	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	97.917	Bos_taurus
ENSMFAG00000002758	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSMFAG00000002758	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSMFAG00000002758	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	98.448	Capra_hircus
ENSMFAG00000002758	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSMFAG00000002758	RBM42	81	98.187	ENSCAPG00000009566	RBM42	99	98.187	Cavia_aperea
ENSMFAG00000002758	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.783	Cavia_porcellus
ENSMFAG00000002758	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSMFAG00000002758	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSMFAG00000002758	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.118	Chinchilla_lanigera
ENSMFAG00000002758	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	100.000	Chlorocebus_sabaeus
ENSMFAG00000002758	RBM42	99	90.254	ENSCANG00000030272	RBM42	100	88.750	Colobus_angolensis_palliatus
ENSMFAG00000002758	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	96.842	Cricetulus_griseus_chok1gshd
ENSMFAG00000002758	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.687	Dasypus_novemcinctus
ENSMFAG00000002758	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.639	Dipodomys_ordii
ENSMFAG00000002758	RBM42	91	92.754	ENSETEG00000007878	RBM42	71	92.857	Echinops_telfairi
ENSMFAG00000002758	RBM42	100	97.783	ENSEASG00005001074	RBM42	100	97.783	Equus_asinus_asinus
ENSMFAG00000002758	RBM42	100	97.783	ENSECAG00000018215	RBM42	100	97.783	Equus_caballus
ENSMFAG00000002758	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSMFAG00000002758	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.247	Fukomys_damarensis
ENSMFAG00000002758	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSMFAG00000002758	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSMFAG00000002758	RBM42	100	95.798	ENSHGLG00000008418	RBM42	99	95.798	Heterocephalus_glaber_female
ENSMFAG00000002758	RBM42	100	95.798	ENSHGLG00100018667	RBM42	99	95.798	Heterocephalus_glaber_male
ENSMFAG00000002758	RBM42	100	100.000	ENSSTOG00000013050	RBM42	99	98.004	Ictidomys_tridecemlineatus
ENSMFAG00000002758	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.406	Jaculus_jaculus
ENSMFAG00000002758	RBM42	98	94.692	ENSLAFG00000014993	RBM42	99	91.458	Loxodonta_africana
ENSMFAG00000002758	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSMFAG00000002758	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSMFAG00000002758	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000002758	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSMFAG00000002758	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.429	Microtus_ochrogaster
ENSMFAG00000002758	RBM42	84	100.000	ENSMODG00000013957	RBM42	82	82.803	Monodelphis_domestica
ENSMFAG00000002758	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.059	Mus_caroli
ENSMFAG00000002758	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.059	Mus_musculus
ENSMFAG00000002758	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.059	Mus_pahari
ENSMFAG00000002758	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.059	Mus_spretus
ENSMFAG00000002758	RBM42	100	98.004	ENSMPUG00000006288	RBM42	100	98.004	Mustela_putorius_furo
ENSMFAG00000002758	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	96.458	Myotis_lucifugus
ENSMFAG00000002758	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.639	Nannospalax_galili
ENSMFAG00000002758	RBM42	85	85.792	ENSNLEG00000011272	-	94	92.179	Nomascus_leucogenys
ENSMFAG00000002758	RBM42	96	83.188	ENSMEUG00000016300	RBM42	100	81.429	Notamacropus_eugenii
ENSMFAG00000002758	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	91.667	Ochotona_princeps
ENSMFAG00000002758	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.339	Octodon_degus
ENSMFAG00000002758	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	98.226	Oryctolagus_cuniculus
ENSMFAG00000002758	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.083	Otolemur_garnettii
ENSMFAG00000002758	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	92.693	Ovis_aries
ENSMFAG00000002758	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSMFAG00000002758	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSMFAG00000002758	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSMFAG00000002758	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSMFAG00000002758	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSMFAG00000002758	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.479	Peromyscus_maniculatus_bairdii
ENSMFAG00000002758	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	81.818	Phascolarctos_cinereus
ENSMFAG00000002758	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.763	Pongo_abelii
ENSMFAG00000002758	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	82.292	Procavia_capensis
ENSMFAG00000002758	RBM42	97	75.638	ENSPCOG00000020672	RBM42	81	98.799	Propithecus_coquereli
ENSMFAG00000002758	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSMFAG00000002758	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	97.500	Pteropus_vampyrus
ENSMFAG00000002758	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.269	Rattus_norvegicus
ENSMFAG00000002758	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSMFAG00000002758	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000002758	RBM42	90	98.695	ENSSBOG00000030666	RBM42	100	99.507	Saimiri_boliviensis_boliviensis
ENSMFAG00000002758	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSMFAG00000002758	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.339	Sus_scrofa
ENSMFAG00000002758	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.708	Ursus_americanus
ENSMFAG00000002758	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.708	Ursus_maritimus
ENSMFAG00000002758	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.783	Vulpes_vulpes