EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000002924 (Gene tree)
Gene ID: 102123787
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 2813 bases
Position: chr20:77313414-77316226
Accession: 102123787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000032747	RRM_1	PF00076.22	4.7e-15	1	1
ENSMFAP00000032743	RRM_1	PF00076.22	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000006971	PABPN1L-202	828	XM_005592870	ENSMFAP00000032747	275 (aa)	XP_005592927	A0A2K5W6M4
ENSMFAT00000006967	PABPN1L-201	741	-	ENSMFAP00000032743	247 (aa)	-	A0A2K5W6P9

Gene Model

Click here to download ENSMFAG00000002924's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03015	mRNA surveillance pathway	KEGG
mcf05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000002924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000002924	PABPN1L	50	56.944	ENSMFAG00000031355	-	99	56.944
ENSMFAG00000002924	PABPN1L	71	50.990	ENSMFAG00000032183	BCL2L2-PABPN1	87	57.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000002924	PABPN1L	100	91.367	ENSG00000205022	PABPN1L	100	92.806	Homo_sapiens
ENSMFAG00000002924	PABPN1L	52	61.486	ENSAPOG00000000685	PABPN1L	57	54.922	Acanthochromis_polyacanthus
ENSMFAG00000002924	PABPN1L	56	58.065	ENSACIG00000021400	PABPN1L	85	56.790	Amphilophus_citrinellus
ENSMFAG00000002924	PABPN1L	59	53.892	ENSAOCG00000019844	PABPN1L	71	53.140	Amphiprion_ocellaris
ENSMFAG00000002924	PABPN1L	59	53.892	ENSAPEG00000019534	PABPN1L	71	53.140	Amphiprion_percula
ENSMFAG00000002924	PABPN1L	52	60.811	ENSATEG00000011646	PABPN1L	70	53.886	Anabas_testudineus
ENSMFAG00000002924	PABPN1L	71	58.763	ENSACAG00000013250	PABPN1L	99	58.763	Anolis_carolinensis
ENSMFAG00000002924	PABPN1L	100	81.522	ENSANAG00000038178	PABPN1L	100	82.246	Aotus_nancymaae
ENSMFAG00000002924	PABPN1L	73	51.244	ENSACLG00000025147	PABPN1L	71	51.741	Astatotilapia_calliptera
ENSMFAG00000002924	PABPN1L	58	57.500	ENSAMXG00000010873	PABPN1L	71	54.497	Astyanax_mexicanus
ENSMFAG00000002924	PABPN1L	100	67.742	ENSBTAG00000023752	-	100	67.742	Bos_taurus
ENSMFAG00000002924	PABPN1L	51	79.433	ENSBTAG00000006727	-	86	79.433	Bos_taurus
ENSMFAG00000002924	PABPN1L	100	82.246	ENSCJAG00000045284	PABPN1L	100	82.609	Callithrix_jacchus
ENSMFAG00000002924	PABPN1L	99	63.701	ENSCHIG00000013987	PABPN1L	100	59.727	Capra_hircus
ENSMFAG00000002924	PABPN1L	95	66.171	ENSCAPG00000007240	PABPN1L	100	65.428	Cavia_aperea
ENSMFAG00000002924	PABPN1L	100	68.000	ENSCPOG00000025951	PABPN1L	100	67.273	Cavia_porcellus
ENSMFAG00000002924	PABPN1L	100	84.783	ENSCCAG00000027631	PABPN1L	100	83.333	Cebus_capucinus
ENSMFAG00000002924	PABPN1L	100	97.818	ENSCATG00000031060	PABPN1L	100	97.818	Cercocebus_atys
ENSMFAG00000002924	PABPN1L	100	72.101	ENSCLAG00000000704	PABPN1L	100	70.909	Chinchilla_lanigera
ENSMFAG00000002924	PABPN1L	100	91.409	ENSCSAG00000002881	PABPN1L	100	91.409	Chlorocebus_sabaeus
ENSMFAG00000002924	PABPN1L	71	57.143	ENSCPBG00000023441	PABPN1L	61	59.391	Chrysemys_picta_bellii
ENSMFAG00000002924	PABPN1L	100	93.116	ENSCANG00000039336	PABPN1L	100	91.667	Colobus_angolensis_palliatus
ENSMFAG00000002924	PABPN1L	100	73.551	ENSCGRG00001013211	Pabpn1l	100	71.636	Cricetulus_griseus_chok1gshd
ENSMFAG00000002924	PABPN1L	100	73.551	ENSCGRG00000015868	Pabpn1l	100	71.636	Cricetulus_griseus_crigri
ENSMFAG00000002924	PABPN1L	100	59.859	ENSDNOG00000034677	PABPN1L	100	59.717	Dasypus_novemcinctus
ENSMFAG00000002924	PABPN1L	100	72.401	ENSEASG00005000777	PABPN1L	100	70.144	Equus_asinus_asinus
ENSMFAG00000002924	PABPN1L	100	72.401	ENSECAG00000000378	PABPN1L	100	70.144	Equus_caballus
ENSMFAG00000002924	PABPN1L	100	60.000	ENSEEUG00000004747	PABPN1L	100	58.545	Erinaceus_europaeus
ENSMFAG00000002924	PABPN1L	55	60.667	ENSELUG00000018385	PABPN1L	58	60.897	Esox_lucius
ENSMFAG00000002924	PABPN1L	100	72.143	ENSFCAG00000010465	PABPN1L	100	70.251	Felis_catus
ENSMFAG00000002924	PABPN1L	73	56.219	ENSFALG00000003319	PABPN1L	80	56.219	Ficedula_albicollis
ENSMFAG00000002924	PABPN1L	100	69.928	ENSFDAG00000021067	PABPN1L	100	68.727	Fukomys_damarensis
ENSMFAG00000002924	PABPN1L	59	53.374	ENSFHEG00000018295	PABPN1L	71	51.980	Fundulus_heteroclitus
ENSMFAG00000002924	PABPN1L	55	55.333	ENSGMOG00000001475	PABPN1L	68	54.211	Gadus_morhua
ENSMFAG00000002924	PABPN1L	61	63.690	ENSGALG00000006242	PABPN1L	94	63.690	Gallus_gallus
ENSMFAG00000002924	PABPN1L	59	53.892	ENSGAFG00000012565	PABPN1L	71	52.427	Gambusia_affinis
ENSMFAG00000002924	PABPN1L	59	52.096	ENSGACG00000015428	PABPN1L	72	51.220	Gasterosteus_aculeatus
ENSMFAG00000002924	PABPN1L	65	59.444	ENSGAGG00000010613	PABPN1L	59	59.444	Gopherus_agassizii
ENSMFAG00000002924	PABPN1L	100	94.182	ENSGGOG00000012670	PABPN1L	100	94.182	Gorilla_gorilla
ENSMFAG00000002924	PABPN1L	73	50.500	ENSHBUG00000002388	PABPN1L	71	51.741	Haplochromis_burtoni
ENSMFAG00000002924	PABPN1L	96	70.076	ENSHGLG00000014207	PABPN1L	100	69.582	Heterocephalus_glaber_female
ENSMFAG00000002924	PABPN1L	96	70.076	ENSHGLG00100005230	PABPN1L	100	69.582	Heterocephalus_glaber_male
ENSMFAG00000002924	PABPN1L	62	51.977	ENSHCOG00000004151	PABPN1L	74	51.613	Hippocampus_comes
ENSMFAG00000002924	PABPN1L	59	51.445	ENSIPUG00000023583	PABPN1L	90	54.737	Ictalurus_punctatus
ENSMFAG00000002924	PABPN1L	100	68.929	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSMFAG00000002924	PABPN1L	100	70.758	ENSJJAG00000006433	Pabpn1l	100	68.841	Jaculus_jaculus
ENSMFAG00000002924	PABPN1L	59	54.491	ENSLBEG00000011647	PABPN1L	69	53.365	Labrus_bergylta
ENSMFAG00000002924	PABPN1L	71	66.327	ENSLAFG00000025902	-	78	66.327	Loxodonta_africana
ENSMFAG00000002924	PABPN1L	100	98.909	ENSMMUG00000012438	PABPN1L	100	98.909	Macaca_mulatta
ENSMFAG00000002924	PABPN1L	100	99.636	ENSMNEG00000044808	PABPN1L	100	99.636	Macaca_nemestrina
ENSMFAG00000002924	PABPN1L	100	98.182	ENSMLEG00000032667	PABPN1L	100	98.182	Mandrillus_leucophaeus
ENSMFAG00000002924	PABPN1L	73	51.244	ENSMZEG00005002186	PABPN1L	71	51.741	Maylandia_zebra
ENSMFAG00000002924	PABPN1L	100	68.727	ENSMAUG00000014032	Pabpn1l	100	68.441	Mesocricetus_auratus
ENSMFAG00000002924	PABPN1L	100	78.623	ENSMICG00000028179	PABPN1L	100	77.455	Microcebus_murinus
ENSMFAG00000002924	PABPN1L	100	67.391	ENSMOCG00000007955	Pabpn1l	100	64.727	Microtus_ochrogaster
ENSMFAG00000002924	PABPN1L	100	55.197	ENSMODG00000003873	-	100	52.330	Monodelphis_domestica
ENSMFAG00000002924	PABPN1L	61	54.913	ENSMALG00000016926	PABPN1L	71	51.942	Monopterus_albus
ENSMFAG00000002924	PABPN1L	100	66.304	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.727	Mus_caroli
ENSMFAG00000002924	PABPN1L	100	65.942	ENSMUSG00000069867	Pabpn1l	100	64.364	Mus_musculus
ENSMFAG00000002924	PABPN1L	100	67.029	MGP_PahariEiJ_G0023268	Pabpn1l	100	65.091	Mus_pahari
ENSMFAG00000002924	PABPN1L	100	65.580	MGP_SPRETEiJ_G0032788	Pabpn1l	100	64.000	Mus_spretus
ENSMFAG00000002924	PABPN1L	96	52.899	ENSMLUG00000003228	PABPN1L	95	51.636	Myotis_lucifugus
ENSMFAG00000002924	PABPN1L	100	72.826	ENSNGAG00000023992	Pabpn1l	100	70.182	Nannospalax_galili
ENSMFAG00000002924	PABPN1L	54	59.333	ENSNBRG00000017078	PABPN1L	73	52.406	Neolamprologus_brichardi
ENSMFAG00000002924	PABPN1L	100	70.036	ENSOPRG00000005597	PABPN1L	100	69.203	Ochotona_princeps
ENSMFAG00000002924	PABPN1L	100	62.976	ENSODEG00000004649	PABPN1L	100	62.500	Octodon_degus
ENSMFAG00000002924	PABPN1L	100	51.971	ENSOANG00000013901	PABPN1L	100	53.763	Ornithorhynchus_anatinus
ENSMFAG00000002924	PABPN1L	73	52.736	ENSORLG00000026560	PABPN1L	71	51.980	Oryzias_latipes
ENSMFAG00000002924	PABPN1L	73	52.736	ENSORLG00020015068	PABPN1L	71	51.980	Oryzias_latipes_hni
ENSMFAG00000002924	PABPN1L	73	52.736	ENSORLG00015000397	PABPN1L	71	51.980	Oryzias_latipes_hsok
ENSMFAG00000002924	PABPN1L	77	50.704	ENSOMEG00000017896	PABPN1L	53	50.704	Oryzias_melastigma
ENSMFAG00000002924	PABPN1L	100	77.256	ENSOGAG00000000433	PABPN1L	100	77.455	Otolemur_garnettii
ENSMFAG00000002924	PABPN1L	100	65.677	ENSOARG00000013682	PABPN1L	100	65.677	Ovis_aries
ENSMFAG00000002924	PABPN1L	100	91.367	ENSPPAG00000028866	PABPN1L	100	92.446	Pan_paniscus
ENSMFAG00000002924	PABPN1L	100	71.685	ENSPPRG00000015106	PABPN1L	100	71.685	Panthera_pardus
ENSMFAG00000002924	PABPN1L	93	64.981	ENSPTIG00000015606	PABPN1L	100	64.981	Panthera_tigris_altaica
ENSMFAG00000002924	PABPN1L	100	91.367	ENSPTRG00000031120	PABPN1L	100	92.446	Pan_troglodytes
ENSMFAG00000002924	PABPN1L	100	98.182	ENSPANG00000026039	PABPN1L	100	98.182	Papio_anubis
ENSMFAG00000002924	PABPN1L	70	55.556	ENSPSIG00000003404	PABPN1L	100	57.576	Pelodiscus_sinensis
ENSMFAG00000002924	PABPN1L	100	71.014	ENSPEMG00000016624	Pabpn1l	100	68.727	Peromyscus_maniculatus_bairdii
ENSMFAG00000002924	PABPN1L	52	64.583	ENSPCIG00000007038	-	100	64.583	Phascolarctos_cinereus
ENSMFAG00000002924	PABPN1L	59	53.892	ENSPFOG00000007001	PABPN1L	89	44.206	Poecilia_formosa
ENSMFAG00000002924	PABPN1L	59	53.892	ENSPLAG00000018431	PABPN1L	71	52.427	Poecilia_latipinna
ENSMFAG00000002924	PABPN1L	59	53.892	ENSPMEG00000009108	PABPN1L	71	52.427	Poecilia_mexicana
ENSMFAG00000002924	PABPN1L	100	90.288	ENSPPYG00000007655	PABPN1L	100	91.007	Pongo_abelii
ENSMFAG00000002924	PABPN1L	100	74.909	ENSPCOG00000024077	PABPN1L	100	74.909	Propithecus_coquereli
ENSMFAG00000002924	PABPN1L	100	68.794	ENSPVAG00000002716	PABPN1L	100	67.376	Pteropus_vampyrus
ENSMFAG00000002924	PABPN1L	73	51.244	ENSPNYG00000004803	PABPN1L	71	51.741	Pundamilia_nyererei
ENSMFAG00000002924	PABPN1L	100	69.565	ENSRNOG00000029558	Pabpn1l	100	67.636	Rattus_norvegicus
ENSMFAG00000002924	PABPN1L	100	95.636	ENSRBIG00000030740	PABPN1L	100	95.636	Rhinopithecus_bieti
ENSMFAG00000002924	PABPN1L	100	95.273	ENSRROG00000032240	-	100	95.273	Rhinopithecus_roxellana
ENSMFAG00000002924	PABPN1L	99	96.350	ENSRROG00000035483	-	99	96.350	Rhinopithecus_roxellana
ENSMFAG00000002924	PABPN1L	100	82.609	ENSSBOG00000018410	PABPN1L	100	82.971	Saimiri_boliviensis_boliviensis
ENSMFAG00000002924	PABPN1L	100	52.542	ENSSHAG00000010001	-	100	51.864	Sarcophilus_harrisii
ENSMFAG00000002924	PABPN1L	59	54.268	ENSSMAG00000021348	PABPN1L	72	51.456	Scophthalmus_maximus
ENSMFAG00000002924	PABPN1L	59	53.892	ENSSDUG00000006986	PABPN1L	71	51.456	Seriola_dumerili
ENSMFAG00000002924	PABPN1L	59	54.491	ENSSLDG00000021845	PABPN1L	71	51.942	Seriola_lalandi_dorsalis
ENSMFAG00000002924	PABPN1L	89	53.061	ENSSARG00000005178	-	96	52.245	Sorex_araneus
ENSMFAG00000002924	PABPN1L	70	60.622	ENSSPUG00000007031	PABPN1L	84	60.825	Sphenodon_punctatus
ENSMFAG00000002924	PABPN1L	73	52.195	ENSSPAG00000017978	PABPN1L	71	52.683	Stegastes_partitus
ENSMFAG00000002924	PABPN1L	100	68.571	ENSSSCG00000036367	PABPN1L	100	68.327	Sus_scrofa
ENSMFAG00000002924	PABPN1L	59	55.090	ENSTRUG00000024725	PABPN1L	80	53.398	Takifugu_rubripes
ENSMFAG00000002924	PABPN1L	100	68.705	ENSTTRG00000004691	PABPN1L	100	68.705	Tursiops_truncatus
ENSMFAG00000002924	PABPN1L	60	51.977	ENSXETG00000011258	pabpn1l	96	50.691	Xenopus_tropicalis