EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000003352 (Gene tree)
Gene ID: 101866663
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 38657 bases
Position: chr10:9442423-9481079
Accession: 101866663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000034068	SAP	PF02037.27	1.4e-09	1	1
ENSMFAP00000034044	SAP	PF02037.27	3.3e-09	1	1
ENSMFAP00000034057	SAP	PF02037.27	4e-09	1	1
ENSMFAP00000034055	SAP	PF02037.27	4.5e-09	1	1
ENSMFAP00000034013	SAP	PF02037.27	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000008272	-	1680	-	ENSMFAP00000034044	559 (aa)	-	A0A2K5WAF7
ENSMFAT00000008241	-	2199	XM_005567141	ENSMFAP00000034013	609 (aa)	XP_005567198	Q4R673
ENSMFAT00000008285	-	1665	-	ENSMFAP00000034057	554 (aa)	-	A0A2K5WAC1
ENSMFAT00000008283	-	1812	-	ENSMFAP00000034055	603 (aa)	-	A0A2K5WAH1
ENSMFAT00000008296	-	669	-	ENSMFAP00000034068	222 (aa)	-	A0A2K5WAF6

Gene Model

Click here to download ENSMFAG00000003352's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003352	XRCC6	100	99.179	ENSG00000196419	XRCC6	100	99.179	Homo_sapiens
ENSMFAG00000003352	XRCC6	99	56.414	ENSAPOG00000012704	xrcc6	99	56.414	Acanthochromis_polyacanthus
ENSMFAG00000003352	XRCC6	99	56.250	ENSACIG00000021277	xrcc6	99	56.250	Amphilophus_citrinellus
ENSMFAG00000003352	XRCC6	99	55.337	ENSAOCG00000021344	xrcc6	99	55.410	Amphiprion_ocellaris
ENSMFAG00000003352	XRCC6	99	55.665	ENSAPEG00000020712	xrcc6	99	55.738	Amphiprion_percula
ENSMFAG00000003352	XRCC6	99	56.250	ENSATEG00000007119	xrcc6	99	56.086	Anabas_testudineus
ENSMFAG00000003352	XRCC6	98	71.455	ENSAPLG00000004469	XRCC6	99	71.143	Anas_platyrhynchos
ENSMFAG00000003352	XRCC6	100	98.851	ENSANAG00000018684	XRCC6	100	98.851	Aotus_nancymaae
ENSMFAG00000003352	XRCC6	100	86.043	ENSANAG00000035230	-	100	86.043	Aotus_nancymaae
ENSMFAG00000003352	XRCC6	100	84.039	ENSANAG00000023445	-	100	84.039	Aotus_nancymaae
ENSMFAG00000003352	XRCC6	100	90.090	ENSANAG00000020017	-	100	90.090	Aotus_nancymaae
ENSMFAG00000003352	XRCC6	99	56.414	ENSACLG00000018608	xrcc6	99	56.250	Astatotilapia_calliptera
ENSMFAG00000003352	XRCC6	99	57.843	ENSAMXG00000007545	xrcc6	99	57.680	Astyanax_mexicanus
ENSMFAG00000003352	XRCC6	100	95.111	ENSCJAG00000040177	-	100	95.111	Callithrix_jacchus
ENSMFAG00000003352	XRCC6	100	95.111	ENSCJAG00000043192	-	100	95.111	Callithrix_jacchus
ENSMFAG00000003352	XRCC6	81	97.765	ENSCJAG00000039518	-	85	97.765	Callithrix_jacchus
ENSMFAG00000003352	XRCC6	100	98.686	ENSCJAG00000045512	XRCC6	100	98.686	Callithrix_jacchus
ENSMFAG00000003352	XRCC6	100	92.889	ENSCJAG00000044926	-	100	92.889	Callithrix_jacchus
ENSMFAG00000003352	XRCC6	99	86.842	ENSTSYG00000011348	XRCC6	99	86.842	Carlito_syrichta
ENSMFAG00000003352	XRCC6	100	92.939	ENSCCAG00000030041	-	95	92.939	Cebus_capucinus
ENSMFAG00000003352	XRCC6	97	98.148	ENSCCAG00000030468	-	100	98.438	Cebus_capucinus
ENSMFAG00000003352	XRCC6	87	94.819	ENSCCAG00000037663	-	97	78.818	Cebus_capucinus
ENSMFAG00000003352	XRCC6	100	79.475	ENSCCAG00000035711	-	100	79.475	Cebus_capucinus
ENSMFAG00000003352	XRCC6	100	100.000	ENSCATG00000042366	XRCC6	100	100.000	Cercocebus_atys
ENSMFAG00000003352	XRCC6	99	85.502	ENSCLAG00000016669	XRCC6	99	85.502	Chinchilla_lanigera
ENSMFAG00000003352	XRCC6	100	100.000	ENSCSAG00000005784	XRCC6	100	100.000	Chlorocebus_sabaeus
ENSMFAG00000003352	XRCC6	99	74.056	ENSCPBG00000020535	XRCC6	99	74.220	Chrysemys_picta_bellii
ENSMFAG00000003352	XRCC6	95	40.278	ENSCING00000000633	-	95	35.849	Ciona_intestinalis
ENSMFAG00000003352	XRCC6	95	40.845	ENSCSAVG00000000984	-	99	42.739	Ciona_savignyi
ENSMFAG00000003352	XRCC6	100	100.000	ENSCANG00000031032	XRCC6	100	100.000	Colobus_angolensis_palliatus
ENSMFAG00000003352	XRCC6	96	81.690	ENSCGRG00001019029	Xrcc6	99	76.809	Cricetulus_griseus_chok1gshd
ENSMFAG00000003352	XRCC6	99	84.539	ENSCGRG00000001528	Xrcc6	99	84.539	Cricetulus_griseus_crigri
ENSMFAG00000003352	XRCC6	95	61.395	ENSCSEG00000020434	xrcc6	99	56.373	Cynoglossus_semilaevis
ENSMFAG00000003352	XRCC6	99	56.486	ENSCVAG00000002189	xrcc6	99	56.486	Cyprinodon_variegatus
ENSMFAG00000003352	XRCC6	94	63.380	ENSDARG00000071551	xrcc6	99	58.689	Danio_rerio
ENSMFAG00000003352	XRCC6	96	66.667	ENSETEG00000015333	-	78	76.923	Echinops_telfairi
ENSMFAG00000003352	XRCC6	99	85.691	ENSEASG00005001514	XRCC6	99	86.020	Equus_asinus_asinus
ENSMFAG00000003352	XRCC6	99	85.197	ENSECAG00000017563	XRCC6	99	86.275	Equus_caballus
ENSMFAG00000003352	XRCC6	100	54.723	ENSELUG00000020301	xrcc6	100	54.723	Esox_lucius
ENSMFAG00000003352	XRCC6	100	70.425	ENSFALG00000011908	XRCC6	97	70.098	Ficedula_albicollis
ENSMFAG00000003352	XRCC6	99	57.353	ENSFHEG00000016833	xrcc6	99	57.190	Fundulus_heteroclitus
ENSMFAG00000003352	XRCC6	94	57.143	ENSGMOG00000013524	xrcc6	99	48.768	Gadus_morhua
ENSMFAG00000003352	XRCC6	98	71.639	ENSGALG00000011932	XRCC6	99	69.885	Gallus_gallus
ENSMFAG00000003352	XRCC6	99	55.229	ENSGAFG00000008130	xrcc6	99	55.229	Gambusia_affinis
ENSMFAG00000003352	XRCC6	99	54.098	ENSGACG00000004868	xrcc6	99	54.098	Gasterosteus_aculeatus
ENSMFAG00000003352	XRCC6	99	73.849	ENSGAGG00000017518	XRCC6	99	74.013	Gopherus_agassizii
ENSMFAG00000003352	XRCC6	100	89.868	ENSGGOG00000026303	-	100	89.868	Gorilla_gorilla
ENSMFAG00000003352	XRCC6	100	99.179	ENSGGOG00000015885	XRCC6	100	99.179	Gorilla_gorilla
ENSMFAG00000003352	XRCC6	97	56.985	ENSHBUG00000023281	xrcc6	99	56.506	Haplochromis_burtoni
ENSMFAG00000003352	XRCC6	99	83.855	ENSHGLG00000018078	XRCC6	99	83.855	Heterocephalus_glaber_female
ENSMFAG00000003352	XRCC6	99	83.855	ENSHGLG00100011264	XRCC6	99	83.855	Heterocephalus_glaber_male
ENSMFAG00000003352	XRCC6	94	59.716	ENSHCOG00000009821	xrcc6	99	53.947	Hippocampus_comes
ENSMFAG00000003352	XRCC6	95	60.930	ENSIPUG00000000767	xrcc6	99	56.739	Ictalurus_punctatus
ENSMFAG00000003352	XRCC6	99	88.158	ENSSTOG00000009490	XRCC6	99	87.993	Ictidomys_tridecemlineatus
ENSMFAG00000003352	XRCC6	99	78.618	ENSJJAG00000017136	Xrcc6	99	79.605	Jaculus_jaculus
ENSMFAG00000003352	XRCC6	99	56.322	ENSKMAG00000002141	xrcc6	99	56.158	Kryptolebias_marmoratus
ENSMFAG00000003352	XRCC6	99	55.556	ENSLBEG00000002691	xrcc6	99	55.556	Labrus_bergylta
ENSMFAG00000003352	XRCC6	90	58.824	ENSLOCG00000011533	xrcc6	99	58.824	Lepisosteus_oculatus
ENSMFAG00000003352	XRCC6	100	100.000	ENSMMUG00000001856	XRCC6	100	100.000	Macaca_mulatta
ENSMFAG00000003352	XRCC6	100	100.000	ENSMNEG00000035076	XRCC6	100	100.000	Macaca_nemestrina
ENSMFAG00000003352	XRCC6	100	100.000	ENSMLEG00000019869	XRCC6	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000003352	XRCC6	99	54.918	ENSMAMG00000003368	xrcc6	99	55.082	Mastacembelus_armatus
ENSMFAG00000003352	XRCC6	97	55.331	ENSMAMG00000003405	xrcc6	97	55.008	Mastacembelus_armatus
ENSMFAG00000003352	XRCC6	99	56.414	ENSMZEG00005028080	xrcc6	99	55.757	Maylandia_zebra
ENSMFAG00000003352	XRCC6	98	71.455	ENSMGAG00000012146	XRCC6	99	69.494	Meleagris_gallopavo
ENSMFAG00000003352	XRCC6	99	84.211	ENSMAUG00000017340	Xrcc6	99	84.211	Mesocricetus_auratus
ENSMFAG00000003352	XRCC6	98	85.662	ENSMOCG00000015717	Xrcc6	99	84.539	Microtus_ochrogaster
ENSMFAG00000003352	XRCC6	99	55.008	ENSMMOG00000003536	xrcc6	99	55.008	Mola_mola
ENSMFAG00000003352	XRCC6	99	57.401	ENSMALG00000013912	xrcc6	94	57.237	Monopterus_albus
ENSMFAG00000003352	XRCC6	99	77.138	MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	Mus_caroli
ENSMFAG00000003352	XRCC6	99	82.895	ENSMUSG00000022471	Xrcc6	99	82.895	Mus_musculus
ENSMFAG00000003352	XRCC6	99	82.072	MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	Mus_pahari
ENSMFAG00000003352	XRCC6	98	82.752	MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	Mus_spretus
ENSMFAG00000003352	XRCC6	99	83.224	ENSNGAG00000013750	Xrcc6	99	83.224	Nannospalax_galili
ENSMFAG00000003352	XRCC6	99	56.908	ENSNBRG00000004125	xrcc6	99	56.743	Neolamprologus_brichardi
ENSMFAG00000003352	XRCC6	100	91.111	ENSNLEG00000034343	-	100	91.111	Nomascus_leucogenys
ENSMFAG00000003352	XRCC6	98	82.537	ENSOPRG00000002386	XRCC6	99	83.103	Ochotona_princeps
ENSMFAG00000003352	XRCC6	99	82.208	ENSODEG00000015847	XRCC6	99	82.372	Octodon_degus
ENSMFAG00000003352	XRCC6	99	56.743	ENSONIG00000019715	xrcc6	99	56.908	Oreochromis_niloticus
ENSMFAG00000003352	XRCC6	96	78.873	ENSOANG00000011328	XRCC6	99	80.097	Ornithorhynchus_anatinus
ENSMFAG00000003352	XRCC6	100	86.043	ENSOCUG00000006948	XRCC6	100	86.371	Oryctolagus_cuniculus
ENSMFAG00000003352	XRCC6	99	55.302	ENSORLG00020007820	xrcc6	99	55.574	Oryzias_latipes_hni
ENSMFAG00000003352	XRCC6	99	54.976	ENSORLG00015006406	xrcc6	99	55.246	Oryzias_latipes_hsok
ENSMFAG00000003352	XRCC6	99	54.976	ENSOMEG00000008998	xrcc6	99	54.976	Oryzias_melastigma
ENSMFAG00000003352	XRCC6	99	87.336	ENSOGAG00000008821	XRCC6	99	87.171	Otolemur_garnettii
ENSMFAG00000003352	XRCC6	100	91.111	ENSPPAG00000043936	-	100	91.111	Pan_paniscus
ENSMFAG00000003352	XRCC6	97	97.674	ENSPPAG00000037167	XRCC6	100	99.490	Pan_paniscus
ENSMFAG00000003352	XRCC6	100	99.179	ENSPTRG00000045824	XRCC6	100	99.179	Pan_troglodytes
ENSMFAG00000003352	XRCC6	100	99.179	ENSPTRG00000022548	XRCC6	100	99.179	Pan_troglodytes
ENSMFAG00000003352	XRCC6	100	91.111	ENSPTRG00000043309	-	100	91.111	Pan_troglodytes
ENSMFAG00000003352	XRCC6	100	91.111	ENSPTRG00000040111	-	100	91.111	Pan_troglodytes
ENSMFAG00000003352	XRCC6	100	99.836	ENSPANG00000001252	XRCC6	100	99.836	Papio_anubis
ENSMFAG00000003352	XRCC6	99	60.526	ENSPKIG00000003974	xrcc6	99	60.526	Paramormyrops_kingsleyae
ENSMFAG00000003352	XRCC6	95	74.648	ENSPSIG00000016499	-	99	73.622	Pelodiscus_sinensis
ENSMFAG00000003352	XRCC6	99	55.372	ENSPMGG00000014220	xrcc6	100	55.537	Periophthalmus_magnuspinnatus
ENSMFAG00000003352	XRCC6	99	83.224	ENSPEMG00000023446	Xrcc6	99	83.224	Peromyscus_maniculatus_bairdii
ENSMFAG00000003352	XRCC6	100	79.016	ENSPCIG00000026409	XRCC6	99	78.852	Phascolarctos_cinereus
ENSMFAG00000003352	XRCC6	99	55.719	ENSPFOG00000017173	xrcc6	99	55.556	Poecilia_formosa
ENSMFAG00000003352	XRCC6	99	55.392	ENSPLAG00000000562	xrcc6	99	55.229	Poecilia_latipinna
ENSMFAG00000003352	XRCC6	99	55.882	ENSPMEG00000018478	xrcc6	99	55.719	Poecilia_mexicana
ENSMFAG00000003352	XRCC6	99	55.700	ENSPREG00000020957	xrcc6	93	55.537	Poecilia_reticulata
ENSMFAG00000003352	XRCC6	100	88.670	ENSPPYG00000011876	XRCC6	100	88.670	Pongo_abelii
ENSMFAG00000003352	XRCC6	99	84.539	ENSPVAG00000001168	XRCC6	99	84.211	Pteropus_vampyrus
ENSMFAG00000003352	XRCC6	99	56.414	ENSPNYG00000003815	xrcc6	99	53.521	Pundamilia_nyererei
ENSMFAG00000003352	XRCC6	99	83.388	ENSRNOG00000006392	Xrcc6	99	83.388	Rattus_norvegicus
ENSMFAG00000003352	XRCC6	97	99.070	ENSRBIG00000039794	XRCC6	100	93.268	Rhinopithecus_bieti
ENSMFAG00000003352	XRCC6	100	88.889	ENSRROG00000037576	-	100	88.889	Rhinopithecus_roxellana
ENSMFAG00000003352	XRCC6	100	100.000	ENSRROG00000030297	XRCC6	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000003352	XRCC6	97	98.140	ENSSBOG00000024724	-	100	85.504	Saimiri_boliviensis_boliviensis
ENSMFAG00000003352	XRCC6	91	86.700	ENSSBOG00000025802	-	91	86.700	Saimiri_boliviensis_boliviensis
ENSMFAG00000003352	XRCC6	99	78.161	ENSSHAG00000010790	XRCC6	99	77.833	Sarcophilus_harrisii
ENSMFAG00000003352	XRCC6	99	60.820	ENSSFOG00015014409	xrcc6	99	60.656	Scleropages_formosus
ENSMFAG00000003352	XRCC6	99	56.908	ENSSMAG00000006496	xrcc6	99	56.908	Scophthalmus_maximus
ENSMFAG00000003352	XRCC6	99	56.536	ENSSDUG00000007542	xrcc6	99	56.373	Seriola_dumerili
ENSMFAG00000003352	XRCC6	99	55.719	ENSSLDG00000009974	xrcc6	99	55.556	Seriola_lalandi_dorsalis
ENSMFAG00000003352	XRCC6	99	73.892	ENSSPUG00000012086	XRCC6	99	73.563	Sphenodon_punctatus
ENSMFAG00000003352	XRCC6	99	56.373	ENSSPAG00000015199	xrcc6	99	56.209	Stegastes_partitus
ENSMFAG00000003352	XRCC6	98	72.192	ENSTGUG00000009852	-	96	72.326	Taeniopygia_guttata
ENSMFAG00000003352	XRCC6	99	55.263	ENSTRUG00000017070	xrcc6	99	55.099	Takifugu_rubripes
ENSMFAG00000003352	XRCC6	94	60.000	ENSTNIG00000012947	xrcc6	99	56.780	Tetraodon_nigroviridis
ENSMFAG00000003352	XRCC6	98	77.798	ENSTBEG00000011736	XRCC6	99	78.141	Tupaia_belangeri
ENSMFAG00000003352	XRCC6	99	70.888	ENSTTRG00000006749	XRCC6	89	84.665	Tursiops_truncatus
ENSMFAG00000003352	XRCC6	99	55.719	ENSXMAG00000009691	xrcc6	99	55.556	Xiphophorus_maculatus