EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000003400 (Gene tree)
Gene ID: -
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 1014 bases
Position: chr13:39828608-39829621
Accession: 101866394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000033814	KH_1	PF00013.29	2.1e-50	1	3
ENSMFAP00000033814	KH_1	PF00013.29	2.1e-50	2	3
ENSMFAP00000033814	KH_1	PF00013.29	2.1e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000008042	PCBP1-201	897	XM_005575665	ENSMFAP00000033814	298 (aa)	XP_005575722	A0A2K5W9N3

Gene Model

Click here to download ENSMFAG00000003400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000003400	PCBP1	75	43.077	ENSMFAG00000043672	NOVA2	72	43.077
ENSMFAG00000003400	PCBP1	87	61.512	ENSMFAG00000003437	-	86	61.512
ENSMFAG00000003400	PCBP1	99	81.271	ENSMFAG00000042984	-	95	81.271
ENSMFAG00000003400	PCBP1	99	72.607	ENSMFAG00000034574	PCBP3	85	72.607
ENSMFAG00000003400	PCBP1	100	81.388	ENSMFAG00000044356	PCBP2	94	81.570
ENSMFAG00000003400	PCBP1	98	33.333	ENSMFAG00000039540	IGF2BP2	80	33.333
ENSMFAG00000003400	PCBP1	96	31.200	ENSMFAG00000002935	IGF2BP3	57	31.200
ENSMFAG00000003400	PCBP1	76	34.667	ENSMFAG00000000292	KHSRP	54	34.667
ENSMFAG00000003400	PCBP1	98	58.784	ENSMFAG00000001431	PCBP4	72	58.784
ENSMFAG00000003400	PCBP1	97	40.541	ENSMFAG00000035425	NOVA1	55	40.541
ENSMFAG00000003400	PCBP1	98	34.646	ENSMFAG00000001613	IGF2BP1	59	34.646
ENSMFAG00000003400	PCBP1	90	41.584	ENSMFAG00000042755	HNRNPK	60	42.574
ENSMFAG00000003400	PCBP1	95	38.028	ENSMFAG00000038309	FUBP3	58	34.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003400	PCBP1	100	88.427	ENSG00000169564	PCBP1	95	88.427	Homo_sapiens
ENSMFAG00000003400	PCBP1	100	91.131	ENSAMEG00000016094	PCBP1	95	91.131	Ailuropoda_melanoleuca
ENSMFAG00000003400	PCBP1	82	82.686	ENSANAG00000019364	-	100	82.686	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	100	76.855	ENSANAG00000023938	-	94	76.855	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	100	80.997	ENSANAG00000026077	-	94	80.997	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	93	92.857	ENSANAG00000027108	-	100	92.857	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	82	83.039	ENSANAG00000031745	-	100	83.039	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	100	90.523	ENSANAG00000033377	-	94	90.523	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	82	86.397	ENSANAG00000022494	-	100	86.397	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	97	84.709	ENSANAG00000026989	-	93	84.709	Aotus_nancymaae
ENSMFAG00000003400	PCBP1	89	87.213	ENSBTAG00000008985	PCBP1	93	87.213	Bos_taurus
ENSMFAG00000003400	PCBP1	100	82.493	ENSCJAG00000038388	-	90	82.493	Callithrix_jacchus
ENSMFAG00000003400	PCBP1	100	88.427	ENSCAFG00000003326	PCBP1	95	88.427	Canis_familiaris
ENSMFAG00000003400	PCBP1	100	88.427	ENSCHIG00000007923	PCBP1	95	88.427	Capra_hircus
ENSMFAG00000003400	PCBP1	100	87.834	ENSTSYG00000027848	PCBP1	95	87.834	Carlito_syrichta
ENSMFAG00000003400	PCBP1	100	88.427	ENSCPOG00000013511	PCBP1	95	88.427	Cavia_porcellus
ENSMFAG00000003400	PCBP1	100	89.439	ENSCCAG00000029186	-	92	89.439	Cebus_capucinus
ENSMFAG00000003400	PCBP1	100	88.427	ENSCCAG00000019842	-	95	88.427	Cebus_capucinus
ENSMFAG00000003400	PCBP1	100	88.427	ENSCATG00000015029	PCBP1	95	88.427	Cercocebus_atys
ENSMFAG00000003400	PCBP1	100	88.131	ENSCLAG00000017909	PCBP1	95	88.131	Chinchilla_lanigera
ENSMFAG00000003400	PCBP1	100	88.427	ENSCSAG00000019441	PCBP1	95	88.427	Chlorocebus_sabaeus
ENSMFAG00000003400	PCBP1	100	87.584	ENSCANG00000032470	-	87	87.584	Colobus_angolensis_palliatus
ENSMFAG00000003400	PCBP1	72	70.588	ENSCANG00000033810	-	87	70.588	Colobus_angolensis_palliatus
ENSMFAG00000003400	PCBP1	100	88.427	ENSCANG00000018039	-	95	88.427	Colobus_angolensis_palliatus
ENSMFAG00000003400	PCBP1	100	88.427	ENSCGRG00001015078	Pcbp1	95	88.427	Cricetulus_griseus_chok1gshd
ENSMFAG00000003400	PCBP1	100	88.427	ENSCGRG00000018899	Pcbp1	95	88.427	Cricetulus_griseus_crigri
ENSMFAG00000003400	PCBP1	83	85.614	ENSDNOG00000036372	PCBP1	99	85.614	Dasypus_novemcinctus
ENSMFAG00000003400	PCBP1	100	88.427	ENSDORG00000008216	Pcbp1	95	88.427	Dipodomys_ordii
ENSMFAG00000003400	PCBP1	100	88.427	ENSFCAG00000022238	PCBP1	95	88.427	Felis_catus
ENSMFAG00000003400	PCBP1	100	88.427	ENSFDAG00000019637	PCBP1	95	88.427	Fukomys_damarensis
ENSMFAG00000003400	PCBP1	100	88.427	ENSGGOG00000028130	PCBP1	95	88.427	Gorilla_gorilla
ENSMFAG00000003400	PCBP1	100	86.647	ENSHGLG00000020243	-	95	86.647	Heterocephalus_glaber_female
ENSMFAG00000003400	PCBP1	100	88.427	ENSHGLG00000020345	Pcbp1	95	88.427	Heterocephalus_glaber_female
ENSMFAG00000003400	PCBP1	100	88.131	ENSHGLG00100019620	-	95	88.131	Heterocephalus_glaber_male
ENSMFAG00000003400	PCBP1	100	88.427	ENSHGLG00100019761	Pcbp1	95	88.427	Heterocephalus_glaber_male
ENSMFAG00000003400	PCBP1	100	88.427	ENSSTOG00000026002	PCBP1	95	88.427	Ictidomys_tridecemlineatus
ENSMFAG00000003400	PCBP1	100	88.427	ENSJJAG00000000737	Pcbp1	95	88.427	Jaculus_jaculus
ENSMFAG00000003400	PCBP1	100	88.427	ENSMMUG00000038295	PCBP1	95	88.427	Macaca_mulatta
ENSMFAG00000003400	PCBP1	100	88.427	ENSMNEG00000002934	PCBP1	95	88.427	Macaca_nemestrina
ENSMFAG00000003400	PCBP1	100	88.427	ENSMLEG00000027389	PCBP1	95	88.427	Mandrillus_leucophaeus
ENSMFAG00000003400	PCBP1	100	88.131	ENSMAUG00000009843	Pcbp1	95	88.131	Mesocricetus_auratus
ENSMFAG00000003400	PCBP1	100	88.427	ENSMICG00000038221	PCBP1	95	88.427	Microcebus_murinus
ENSMFAG00000003400	PCBP1	100	88.427	ENSMOCG00000008102	Pcbp1	95	88.427	Microtus_ochrogaster
ENSMFAG00000003400	PCBP1	100	88.427	MGP_CAROLIEiJ_G0028598	Pcbp1	95	88.427	Mus_caroli
ENSMFAG00000003400	PCBP1	100	88.427	ENSMUSG00000051695	Pcbp1	95	88.427	Mus_musculus
ENSMFAG00000003400	PCBP1	100	88.427	MGP_PahariEiJ_G0022335	Pcbp1	95	88.427	Mus_pahari
ENSMFAG00000003400	PCBP1	100	88.427	MGP_SPRETEiJ_G0029609	Pcbp1	95	88.427	Mus_spretus
ENSMFAG00000003400	PCBP1	100	91.131	ENSMPUG00000007175	PCBP1	95	91.131	Mustela_putorius_furo
ENSMFAG00000003400	PCBP1	100	88.427	ENSMLUG00000014173	PCBP1	95	88.427	Myotis_lucifugus
ENSMFAG00000003400	PCBP1	100	88.427	ENSNGAG00000011957	-	95	88.427	Nannospalax_galili
ENSMFAG00000003400	PCBP1	100	88.427	ENSNGAG00000014909	-	95	88.427	Nannospalax_galili
ENSMFAG00000003400	PCBP1	100	88.427	ENSNLEG00000018722	PCBP1	95	88.427	Nomascus_leucogenys
ENSMFAG00000003400	PCBP1	100	71.513	ENSODEG00000000263	PCBP1	94	71.513	Octodon_degus
ENSMFAG00000003400	PCBP1	100	88.427	ENSOCUG00000003634	PCBP1	95	88.427	Oryctolagus_cuniculus
ENSMFAG00000003400	PCBP1	100	91.131	ENSOGAG00000028946	PCBP1	95	91.131	Otolemur_garnettii
ENSMFAG00000003400	PCBP1	100	88.427	ENSOARG00000019516	PCBP1	95	88.427	Ovis_aries
ENSMFAG00000003400	PCBP1	100	88.427	ENSPPAG00000036116	PCBP1	94	88.427	Pan_paniscus
ENSMFAG00000003400	PCBP1	100	88.427	ENSPPRG00000020533	PCBP1	95	88.427	Panthera_pardus
ENSMFAG00000003400	PCBP1	100	88.427	ENSPTIG00000007318	PCBP1	95	88.427	Panthera_tigris_altaica
ENSMFAG00000003400	PCBP1	100	88.427	ENSPTRG00000012025	PCBP1	95	88.427	Pan_troglodytes
ENSMFAG00000003400	PCBP1	100	88.427	ENSPANG00000011314	PCBP1	95	88.427	Papio_anubis
ENSMFAG00000003400	PCBP1	100	88.427	ENSPPYG00000012328	PCBP1	95	88.427	Pongo_abelii
ENSMFAG00000003400	PCBP1	100	88.427	ENSPCOG00000026934	PCBP1	95	88.427	Propithecus_coquereli
ENSMFAG00000003400	PCBP1	92	86.581	ENSRROG00000012514	-	94	86.581	Rhinopithecus_roxellana
ENSMFAG00000003400	PCBP1	100	87.834	ENSRROG00000009684	-	90	87.834	Rhinopithecus_roxellana
ENSMFAG00000003400	PCBP1	100	89.735	ENSSBOG00000035309	-	89	89.735	Saimiri_boliviensis_boliviensis
ENSMFAG00000003400	PCBP1	100	88.427	ENSSSCG00000027224	PCBP1	95	88.427	Sus_scrofa
ENSMFAG00000003400	PCBP1	89	87.171	ENSVVUG00000028033	PCBP1	93	87.171	Vulpes_vulpes