EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000003572 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 5139 bases
Position: chr5:183951654-183956792
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000034163	Gar1	PF04410.14	3.3e-28	1	1
ENSMFAP00000034166	Gar1	PF04410.14	6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000008391	-	573	-	ENSMFAP00000034163	190 (aa)	-	A0A2K5WAM0
ENSMFAT00000008394	-	726	-	ENSMFAP00000034166	241 (aa)	-	A0A2K5WAV2

Gene Model

Click here to download ENSMFAG00000003572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000003572	-	54	82.727	ENSMFAG00000024592	GAR1	50	84.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003572	-	53	83.486	ENSG00000109534	GAR1	50	84.259	Homo_sapiens
ENSMFAG00000003572	-	52	80.374	ENSAPOG00000019754	gar1	51	80.556	Acanthochromis_polyacanthus
ENSMFAG00000003572	-	53	81.651	ENSAMEG00000004605	GAR1	53	82.407	Ailuropoda_melanoleuca
ENSMFAG00000003572	-	52	80.374	ENSAOCG00000020947	gar1	50	80.556	Amphiprion_ocellaris
ENSMFAG00000003572	-	52	80.374	ENSAPEG00000001676	gar1	50	80.556	Amphiprion_percula
ENSMFAG00000003572	-	52	80.374	ENSATEG00000003733	gar1	50	80.556	Anabas_testudineus
ENSMFAG00000003572	-	52	76.415	ENSAPLG00000010926	GAR1	59	76.636	Anas_platyrhynchos
ENSMFAG00000003572	-	52	76.415	ENSACAG00000010031	GAR1	50	76.636	Anolis_carolinensis
ENSMFAG00000003572	-	53	83.486	ENSANAG00000021608	GAR1	50	84.259	Aotus_nancymaae
ENSMFAG00000003572	-	53	82.569	ENSBTAG00000000748	GAR1	51	83.333	Bos_taurus
ENSMFAG00000003572	-	64	50.617	WBGene00022046	Y66H1A.4	61	40.667	Caenorhabditis_elegans
ENSMFAG00000003572	-	53	83.486	ENSCJAG00000004041	GAR1	50	84.259	Callithrix_jacchus
ENSMFAG00000003572	-	52	82.075	ENSCAFG00020015566	GAR1	56	83.333	Canis_lupus_dingo
ENSMFAG00000003572	-	54	81.818	ENSCHIG00000016026	-	52	83.333	Capra_hircus
ENSMFAG00000003572	-	53	83.486	ENSTSYG00000013668	-	51	84.259	Carlito_syrichta
ENSMFAG00000003572	-	53	77.064	ENSTSYG00000026632	-	55	77.778	Carlito_syrichta
ENSMFAG00000003572	-	54	81.818	ENSCPOG00000004216	GAR1	50	83.333	Cavia_porcellus
ENSMFAG00000003572	-	53	83.486	ENSCCAG00000029372	GAR1	50	84.259	Cebus_capucinus
ENSMFAG00000003572	-	54	82.727	ENSCATG00000021854	GAR1	55	84.259	Cercocebus_atys
ENSMFAG00000003572	-	54	80.909	ENSCLAG00000005335	GAR1	71	78.947	Chinchilla_lanigera
ENSMFAG00000003572	-	52	82.243	ENSCSAG00000003922	GAR1	55	84.259	Chlorocebus_sabaeus
ENSMFAG00000003572	-	52	78.302	ENSCPBG00000004310	GAR1	54	78.505	Chrysemys_picta_bellii
ENSMFAG00000003572	-	54	82.727	ENSCANG00000039262	GAR1	50	84.259	Colobus_angolensis_palliatus
ENSMFAG00000003572	-	52	82.243	ENSCVAG00000002103	gar1	52	82.407	Cyprinodon_variegatus
ENSMFAG00000003572	-	53	82.569	ENSDNOG00000037632	GAR1	55	83.333	Dasypus_novemcinctus
ENSMFAG00000003572	-	54	81.982	ENSDORG00000000482	Gar1	50	83.333	Dipodomys_ordii
ENSMFAG00000003572	-	82	48.485	FBgn0011824	CG4038	75	48.485	Drosophila_melanogaster
ENSMFAG00000003572	-	54	82.727	ENSEASG00005004658	GAR1	50	84.259	Equus_asinus_asinus
ENSMFAG00000003572	-	54	81.818	ENSECAG00000013624	GAR1	55	83.333	Equus_caballus
ENSMFAG00000003572	-	70	52.941	ENSFCAG00000025841	-	57	63.393	Felis_catus
ENSMFAG00000003572	-	53	82.569	ENSFCAG00000040791	-	52	83.333	Felis_catus
ENSMFAG00000003572	-	54	81.081	ENSFHEG00000008068	gar1	50	82.407	Fundulus_heteroclitus
ENSMFAG00000003572	-	51	78.846	ENSGAGG00000004393	GAR1	55	77.570	Gopherus_agassizii
ENSMFAG00000003572	-	54	83.495	ENSGGOG00000036205	-	54	84.000	Gorilla_gorilla
ENSMFAG00000003572	-	53	82.569	ENSGGOG00000008681	GAR1	50	83.333	Gorilla_gorilla
ENSMFAG00000003572	-	52	82.243	ENSHGLG00000000493	GAR1	74	80.357	Heterocephalus_glaber_female
ENSMFAG00000003572	-	63	72.656	ENSIPUG00000003194	gar1	63	72.727	Ictalurus_punctatus
ENSMFAG00000003572	-	53	81.651	ENSSTOG00000005577	GAR1	74	77.193	Ictidomys_tridecemlineatus
ENSMFAG00000003572	-	54	76.577	ENSKMAG00000010402	gar1	51	78.704	Kryptolebias_marmoratus
ENSMFAG00000003572	-	59	69.167	ENSLACG00000003306	GAR1	64	74.766	Latimeria_chalumnae
ENSMFAG00000003572	-	52	79.439	ENSLOCG00000011711	GAR1	74	75.207	Lepisosteus_oculatus
ENSMFAG00000003572	-	54	82.727	ENSMMUG00000021225	GAR1	50	84.259	Macaca_mulatta
ENSMFAG00000003572	-	100	100.000	ENSMMUG00000038929	-	100	100.000	Macaca_mulatta
ENSMFAG00000003572	-	54	82.727	ENSMNEG00000042594	GAR1	50	84.259	Macaca_nemestrina
ENSMFAG00000003572	-	67	83.621	ENSMLEG00000002496	GAR1	56	83.761	Mandrillus_leucophaeus
ENSMFAG00000003572	-	53	81.651	ENSMAUG00000016788	Gar1	72	77.193	Mesocricetus_auratus
ENSMFAG00000003572	-	55	81.250	ENSMICG00000003326	GAR1	50	83.333	Microcebus_murinus
ENSMFAG00000003572	-	53	80.734	ENSMOCG00000001340	Gar1	72	78.947	Microtus_ochrogaster
ENSMFAG00000003572	-	52	79.439	ENSMMOG00000004156	gar1	53	79.630	Mola_mola
ENSMFAG00000003572	-	52	79.439	ENSMALG00000009672	gar1	50	79.630	Monopterus_albus
ENSMFAG00000003572	-	53	81.651	MGP_CAROLIEiJ_G0025627	Gar1	72	78.947	Mus_caroli
ENSMFAG00000003572	-	54	80.909	ENSMUSG00000028010	Gar1	72	78.947	Mus_musculus
ENSMFAG00000003572	-	54	80.909	MGP_PahariEiJ_G0027076	Gar1	72	78.947	Mus_pahari
ENSMFAG00000003572	-	54	80.909	MGP_SPRETEiJ_G0026580	Gar1	72	78.947	Mus_spretus
ENSMFAG00000003572	-	53	82.569	ENSMPUG00000008615	GAR1	52	83.333	Mustela_putorius_furo
ENSMFAG00000003572	-	63	81.250	ENSMLUG00000003776	GAR1	58	79.389	Myotis_lucifugus
ENSMFAG00000003572	-	54	83.636	ENSNGAG00000008268	Gar1	74	78.947	Nannospalax_galili
ENSMFAG00000003572	-	54	82.727	ENSNLEG00000016578	GAR1	50	84.259	Nomascus_leucogenys
ENSMFAG00000003572	-	89	70.588	ENSNLEG00000034282	-	55	88.119	Nomascus_leucogenys
ENSMFAG00000003572	-	52	82.243	ENSODEG00000011083	GAR1	56	82.407	Octodon_degus
ENSMFAG00000003572	-	53	82.569	ENSOCUG00000003901	GAR1	50	83.333	Oryctolagus_cuniculus
ENSMFAG00000003572	-	53	82.569	ENSOGAG00000004693	GAR1	51	83.333	Otolemur_garnettii
ENSMFAG00000003572	-	53	82.569	ENSOARG00000004910	GAR1	51	83.333	Ovis_aries
ENSMFAG00000003572	-	63	82.677	ENSPPAG00000014081	GAR1	58	82.677	Pan_paniscus
ENSMFAG00000003572	-	53	82.569	ENSPPRG00000023697	GAR1	52	83.333	Panthera_pardus
ENSMFAG00000003572	-	53	82.569	ENSPTIG00000021565	GAR1	52	83.333	Panthera_tigris_altaica
ENSMFAG00000003572	-	54	82.727	ENSPTRG00000016364	GAR1	55	84.259	Pan_troglodytes
ENSMFAG00000003572	-	64	71.901	ENSPTRG00000049340	-	51	84.000	Pan_troglodytes
ENSMFAG00000003572	-	100	92.531	ENSPANG00000033062	-	100	92.531	Papio_anubis
ENSMFAG00000003572	-	54	82.727	ENSPANG00000000639	GAR1	50	84.259	Papio_anubis
ENSMFAG00000003572	-	53	81.651	ENSPEMG00000015838	Gar1	72	77.193	Peromyscus_maniculatus_bairdii
ENSMFAG00000003572	-	53	77.778	ENSPCIG00000018912	GAR1	55	72.308	Phascolarctos_cinereus
ENSMFAG00000003572	-	52	80.374	ENSPFOG00000024155	gar1	51	80.556	Poecilia_formosa
ENSMFAG00000003572	-	52	80.374	ENSPLAG00000015056	gar1	51	80.556	Poecilia_latipinna
ENSMFAG00000003572	-	52	81.308	ENSPMEG00000009320	gar1	52	81.481	Poecilia_mexicana
ENSMFAG00000003572	-	53	83.486	ENSPPYG00000014996	GAR1	50	84.259	Pongo_abelii
ENSMFAG00000003572	-	52	82.243	ENSPCOG00000027049	GAR1	55	84.259	Propithecus_coquereli
ENSMFAG00000003572	-	54	82.727	ENSRNOG00000061146	Gar1	63	84.259	Rattus_norvegicus
ENSMFAG00000003572	-	52	84.112	ENSRBIG00000019547	GAR1	55	84.259	Rhinopithecus_bieti
ENSMFAG00000003572	-	81	92.810	ENSRBIG00000042411	-	80	92.810	Rhinopithecus_bieti
ENSMFAG00000003572	-	100	87.629	ENSRROG00000044348	-	100	90.722	Rhinopithecus_roxellana
ENSMFAG00000003572	-	54	82.727	ENSRROG00000028454	GAR1	55	84.259	Rhinopithecus_roxellana
ENSMFAG00000003572	-	53	83.486	ENSSBOG00000024785	GAR1	50	84.259	Saimiri_boliviensis_boliviensis
ENSMFAG00000003572	-	52	77.570	ENSSMAG00000009976	gar1	75	69.006	Scophthalmus_maximus
ENSMFAG00000003572	-	52	79.439	ENSSLDG00000023264	gar1	51	79.630	Seriola_lalandi_dorsalis
ENSMFAG00000003572	-	61	77.236	ENSSPUG00000008707	GAR1	69	78.862	Sphenodon_punctatus
ENSMFAG00000003572	-	54	81.818	ENSSSCG00000009137	GAR1	53	83.333	Sus_scrofa
ENSMFAG00000003572	-	52	77.570	ENSTRUG00000020580	gar1	52	77.778	Takifugu_rubripes
ENSMFAG00000003572	-	51	79.808	ENSTNIG00000013023	gar1	61	80.556	Tetraodon_nigroviridis
ENSMFAG00000003572	-	52	82.075	ENSUAMG00000005652	GAR1	56	83.333	Ursus_americanus
ENSMFAG00000003572	-	53	82.569	ENSUMAG00000000776	GAR1	52	83.333	Ursus_maritimus
ENSMFAG00000003572	-	53	82.569	ENSVVUG00000017612	GAR1	56	83.333	Vulpes_vulpes