EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000003649 (Gene tree)
Gene ID: 102131309
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 130338 bases
Position: chr1:135574511-135704848
Accession: 102131309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000034345	ResIII	PF04851.15	3.2e-11	1	1
ENSMFAP00000034345	DEAD	PF00270.29	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000008573	HFM1-201	4299	XM_005542761	ENSMFAP00000034345	1432 (aa)	XP_005542818	A0A2K5WB44

Gene Model

Click here to download ENSMFAG00000003649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000003649	HFM1	51	34.324	ENSMFAG00000002081	ASCC3	62	34.324
ENSMFAG00000003649	HFM1	58	31.630	ENSMFAG00000040174	SNRNP200	75	31.630

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003649	HFM1	100	93.407	ENSG00000162669	HFM1	100	95.652	Homo_sapiens
ENSMFAG00000003649	HFM1	64	62.310	ENSAPOG00000005304	hfm1	100	62.310	Acanthochromis_polyacanthus
ENSMFAG00000003649	HFM1	100	83.079	ENSAMEG00000000432	HFM1	100	83.079	Ailuropoda_melanoleuca
ENSMFAG00000003649	HFM1	70	57.253	ENSACIG00000021553	hfm1	91	57.253	Amphilophus_citrinellus
ENSMFAG00000003649	HFM1	64	62.998	ENSAOCG00000022839	hfm1	100	62.998	Amphiprion_ocellaris
ENSMFAG00000003649	HFM1	64	62.881	ENSAPEG00000014316	hfm1	100	62.881	Amphiprion_percula
ENSMFAG00000003649	HFM1	67	61.191	ENSATEG00000019181	hfm1	80	60.152	Anabas_testudineus
ENSMFAG00000003649	HFM1	100	58.010	ENSAPLG00000013639	HFM1	100	58.010	Anas_platyrhynchos
ENSMFAG00000003649	HFM1	100	88.011	ENSANAG00000029513	HFM1	100	88.011	Aotus_nancymaae
ENSMFAG00000003649	HFM1	65	61.087	ENSACLG00000009033	hfm1	97	62.440	Astatotilapia_calliptera
ENSMFAG00000003649	HFM1	85	52.522	ENSAMXG00000006108	hfm1	83	52.522	Astyanax_mexicanus
ENSMFAG00000003649	HFM1	100	82.007	ENSBTAG00000020856	HFM1	100	82.007	Bos_taurus
ENSMFAG00000003649	HFM1	100	89.729	ENSCJAG00000001843	HFM1	100	89.729	Callithrix_jacchus
ENSMFAG00000003649	HFM1	100	82.316	ENSCAFG00000020187	HFM1	100	82.316	Canis_familiaris
ENSMFAG00000003649	HFM1	100	84.141	ENSTSYG00000014250	HFM1	100	84.141	Carlito_syrichta
ENSMFAG00000003649	HFM1	99	75.798	ENSCPOG00000007421	HFM1	99	75.798	Cavia_porcellus
ENSMFAG00000003649	HFM1	100	89.729	ENSCCAG00000033206	HFM1	100	89.729	Cebus_capucinus
ENSMFAG00000003649	HFM1	100	95.836	ENSCATG00000030987	HFM1	100	95.836	Cercocebus_atys
ENSMFAG00000003649	HFM1	100	77.942	ENSCLAG00000005173	HFM1	99	77.942	Chinchilla_lanigera
ENSMFAG00000003649	HFM1	65	96.053	ENSCHOG00000011824	-	74	96.053	Choloepus_hoffmanni
ENSMFAG00000003649	HFM1	100	72.834	ENSCGRG00001016995	Hfm1	100	72.834	Cricetulus_griseus_chok1gshd
ENSMFAG00000003649	HFM1	100	75.017	ENSCGRG00000017181	Hfm1	100	75.017	Cricetulus_griseus_crigri
ENSMFAG00000003649	HFM1	70	57.512	ENSCSEG00000017659	hfm1	93	57.471	Cynoglossus_semilaevis
ENSMFAG00000003649	HFM1	50	65.084	ENSCVAG00000005075	hfm1	86	65.084	Cyprinodon_variegatus
ENSMFAG00000003649	HFM1	79	52.406	ENSDARG00000104288	hfm1	99	52.406	Danio_rerio
ENSMFAG00000003649	HFM1	100	78.240	ENSDNOG00000004776	HFM1	100	78.240	Dasypus_novemcinctus
ENSMFAG00000003649	HFM1	100	75.222	ENSDORG00000014661	Hfm1	100	75.222	Dipodomys_ordii
ENSMFAG00000003649	HFM1	70	81.532	ENSEASG00005015424	HFM1	98	83.913	Equus_asinus_asinus
ENSMFAG00000003649	HFM1	100	81.342	ENSECAG00000024039	HFM1	100	81.342	Equus_caballus
ENSMFAG00000003649	HFM1	64	64.186	ENSELUG00000018944	hfm1	99	64.186	Esox_lucius
ENSMFAG00000003649	HFM1	100	82.606	ENSFCAG00000029116	HFM1	100	82.606	Felis_catus
ENSMFAG00000003649	HFM1	100	57.963	ENSFALG00000001781	HFM1	100	58.362	Ficedula_albicollis
ENSMFAG00000003649	HFM1	100	76.305	ENSFDAG00000020816	HFM1	100	76.305	Fukomys_damarensis
ENSMFAG00000003649	HFM1	66	56.877	ENSGMOG00000017436	hfm1	100	56.877	Gadus_morhua
ENSMFAG00000003649	HFM1	71	58.647	ENSGAFG00000018093	hfm1	95	63.251	Gambusia_affinis
ENSMFAG00000003649	HFM1	66	58.974	ENSGACG00000015686	hfm1	100	58.974	Gasterosteus_aculeatus
ENSMFAG00000003649	HFM1	100	93.060	ENSGGOG00000038524	HFM1	100	93.060	Gorilla_gorilla
ENSMFAG00000003649	HFM1	65	61.087	ENSHBUG00000007309	hfm1	97	56.468	Haplochromis_burtoni
ENSMFAG00000003649	HFM1	57	61.671	ENSHCOG00000019632	hfm1	97	61.671	Hippocampus_comes
ENSMFAG00000003649	HFM1	66	61.273	ENSIPUG00000017020	hfm1	92	63.082	Ictalurus_punctatus
ENSMFAG00000003649	HFM1	100	75.312	ENSJJAG00000017198	Hfm1	100	75.312	Jaculus_jaculus
ENSMFAG00000003649	HFM1	62	60.730	ENSKMAG00000002282	hfm1	90	60.797	Kryptolebias_marmoratus
ENSMFAG00000003649	HFM1	70	57.520	ENSLBEG00000006759	hfm1	98	62.471	Labrus_bergylta
ENSMFAG00000003649	HFM1	66	66.495	ENSLACG00000010698	HFM1	99	62.830	Latimeria_chalumnae
ENSMFAG00000003649	HFM1	75	59.688	ENSLOCG00000004931	hfm1	99	59.780	Lepisosteus_oculatus
ENSMFAG00000003649	HFM1	52	85.294	ENSLAFG00000015903	-	99	85.294	Loxodonta_africana
ENSMFAG00000003649	HFM1	100	96.947	ENSMMUG00000006819	HFM1	100	96.947	Macaca_mulatta
ENSMFAG00000003649	HFM1	57	64.364	ENSMAMG00000004623	hfm1	97	71.357	Mastacembelus_armatus
ENSMFAG00000003649	HFM1	65	61.087	ENSMZEG00005004679	hfm1	97	62.440	Maylandia_zebra
ENSMFAG00000003649	HFM1	54	73.698	ENSMGAG00000008437	HFM1	98	73.698	Meleagris_gallopavo
ENSMFAG00000003649	HFM1	100	74.965	ENSMAUG00000018858	Hfm1	100	74.965	Mesocricetus_auratus
ENSMFAG00000003649	HFM1	100	84.775	ENSMICG00000037935	HFM1	100	84.775	Microcebus_murinus
ENSMFAG00000003649	HFM1	100	72.992	ENSMOCG00000014812	Hfm1	100	72.992	Microtus_ochrogaster
ENSMFAG00000003649	HFM1	62	60.758	ENSMMOG00000006148	hfm1	96	61.628	Mola_mola
ENSMFAG00000003649	HFM1	65	60.699	ENSMALG00000002401	hfm1	100	64.010	Monopterus_albus
ENSMFAG00000003649	HFM1	94	71.907	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.907	Mus_caroli
ENSMFAG00000003649	HFM1	100	74.359	ENSMUSG00000043410	Hfm1	100	74.359	Mus_musculus
ENSMFAG00000003649	HFM1	100	74.151	MGP_PahariEiJ_G0017268	Hfm1	100	74.151	Mus_pahari
ENSMFAG00000003649	HFM1	100	74.012	MGP_SPRETEiJ_G0028495	Hfm1	100	74.012	Mus_spretus
ENSMFAG00000003649	HFM1	100	78.954	ENSMPUG00000004594	HFM1	100	78.954	Mustela_putorius_furo
ENSMFAG00000003649	HFM1	100	79.889	ENSMLUG00000010200	HFM1	100	79.889	Myotis_lucifugus
ENSMFAG00000003649	HFM1	65	57.934	ENSNBRG00000002910	hfm1	97	62.652	Neolamprologus_brichardi
ENSMFAG00000003649	HFM1	100	88.981	ENSNLEG00000010285	HFM1	100	88.981	Nomascus_leucogenys
ENSMFAG00000003649	HFM1	84	66.092	ENSMEUG00000015788	HFM1	84	66.092	Notamacropus_eugenii
ENSMFAG00000003649	HFM1	84	76.670	ENSOPRG00000013916	HFM1	84	76.670	Ochotona_princeps
ENSMFAG00000003649	HFM1	71	59.223	ENSONIG00000010590	hfm1	99	59.117	Oreochromis_niloticus
ENSMFAG00000003649	HFM1	56	63.210	ENSORLG00000026844	hfm1	99	63.210	Oryzias_latipes
ENSMFAG00000003649	HFM1	85	47.331	ENSORLG00020002951	hfm1	96	47.410	Oryzias_latipes_hni
ENSMFAG00000003649	HFM1	85	52.275	ENSOMEG00000016474	hfm1	83	52.275	Oryzias_melastigma
ENSMFAG00000003649	HFM1	85	85.077	ENSOGAG00000032369	HFM1	100	85.077	Otolemur_garnettii
ENSMFAG00000003649	HFM1	100	82.158	ENSOARG00000015812	HFM1	100	82.158	Ovis_aries
ENSMFAG00000003649	HFM1	92	93.534	ENSPPAG00000024582	HFM1	100	93.534	Pan_paniscus
ENSMFAG00000003649	HFM1	100	82.536	ENSPPRG00000003270	HFM1	100	82.536	Panthera_pardus
ENSMFAG00000003649	HFM1	100	82.467	ENSPTIG00000018881	HFM1	100	82.467	Panthera_tigris_altaica
ENSMFAG00000003649	HFM1	100	93.199	ENSPTRG00000000948	HFM1	100	93.199	Pan_troglodytes
ENSMFAG00000003649	HFM1	100	95.489	ENSPANG00000009838	HFM1	100	95.489	Papio_anubis
ENSMFAG00000003649	HFM1	62	64.397	ENSPKIG00000003810	hfm1	95	65.576	Paramormyrops_kingsleyae
ENSMFAG00000003649	HFM1	57	63.228	ENSPMGG00000011059	hfm1	100	63.228	Periophthalmus_magnuspinnatus
ENSMFAG00000003649	HFM1	100	77.008	ENSPEMG00000022852	Hfm1	100	77.008	Peromyscus_maniculatus_bairdii
ENSMFAG00000003649	HFM1	100	64.800	ENSPCIG00000014233	HFM1	100	64.800	Phascolarctos_cinereus
ENSMFAG00000003649	HFM1	70	59.224	ENSPFOG00000017194	hfm1	99	59.224	Poecilia_formosa
ENSMFAG00000003649	HFM1	71	61.240	ENSPLAG00000000571	hfm1	92	61.240	Poecilia_latipinna
ENSMFAG00000003649	HFM1	71	61.234	ENSPMEG00000019475	hfm1	92	61.234	Poecilia_mexicana
ENSMFAG00000003649	HFM1	70	60.392	ENSPREG00000007803	hfm1	93	64.242	Poecilia_reticulata
ENSMFAG00000003649	HFM1	100	92.922	ENSPPYG00000001163	HFM1	100	92.922	Pongo_abelii
ENSMFAG00000003649	HFM1	74	83.051	ENSPCAG00000004289	-	74	83.051	Procavia_capensis
ENSMFAG00000003649	HFM1	100	76.528	ENSPVAG00000009713	HFM1	100	76.528	Pteropus_vampyrus
ENSMFAG00000003649	HFM1	65	60.874	ENSPNYG00000001795	hfm1	97	62.321	Pundamilia_nyererei
ENSMFAG00000003649	HFM1	58	65.119	ENSPNAG00000010865	hfm1	83	65.119	Pygocentrus_nattereri
ENSMFAG00000003649	HFM1	100	73.527	ENSRNOG00000023299	Hfm1	100	73.527	Rattus_norvegicus
ENSMFAG00000003649	HFM1	100	94.379	ENSRROG00000045569	HFM1	100	94.379	Rhinopithecus_roxellana
ENSMFAG00000003649	HFM1	100	87.370	ENSSBOG00000027456	HFM1	100	87.370	Saimiri_boliviensis_boliviensis
ENSMFAG00000003649	HFM1	60	67.391	ENSSHAG00000014616	-	98	67.391	Sarcophilus_harrisii
ENSMFAG00000003649	HFM1	86	54.502	ENSSFOG00015020129	hfm1	83	54.502	Scleropages_formosus
ENSMFAG00000003649	HFM1	62	61.376	ENSSMAG00000006907	hfm1	87	61.376	Scophthalmus_maximus
ENSMFAG00000003649	HFM1	62	63.152	ENSSDUG00000011424	hfm1	100	63.152	Seriola_dumerili
ENSMFAG00000003649	HFM1	62	63.482	ENSSLDG00000016386	hfm1	99	63.482	Seriola_lalandi_dorsalis
ENSMFAG00000003649	HFM1	62	64.062	ENSSPAG00000001023	hfm1	100	64.062	Stegastes_partitus
ENSMFAG00000003649	HFM1	100	78.859	ENSSSCG00000006912	HFM1	100	78.859	Sus_scrofa
ENSMFAG00000003649	HFM1	66	72.037	ENSTGUG00000006172	HFM1	100	72.037	Taeniopygia_guttata
ENSMFAG00000003649	HFM1	100	78.360	ENSTTRG00000013933	HFM1	100	78.360	Tursiops_truncatus
ENSMFAG00000003649	HFM1	93	81.967	ENSVPAG00000011331	HFM1	93	81.967	Vicugna_pacos
ENSMFAG00000003649	HFM1	70	79.054	ENSVVUG00000020760	HFM1	99	79.054	Vulpes_vulpes
ENSMFAG00000003649	HFM1	58	64.124	ENSXMAG00000004178	hfm1	93	64.124	Xiphophorus_maculatus