EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000003824 (Gene tree)
Gene ID: 102119578
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 48551 bases
Position: chr20:23681055-23729605
Accession: 102119578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000034689	Ago_hook	PF10427.9	5.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000008919	TNRC6A-201	5811	XM_005591479	ENSMFAP00000034689	1936 (aa)	XP_005591536	A0A2K5WC69

Gene Model

Click here to download ENSMFAG00000003824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000003824	TNRC6A	99	42.269	ENSMFAG00000043943	TNRC6C	98	43.631
ENSMFAG00000003824	TNRC6A	99	35.629	ENSMFAG00000003862	TNRC6B	99	35.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003824	TNRC6A	99	97.815	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSMFAG00000003824	TNRC6A	99	94.953	ENSAMEG00000009333	TNRC6A	99	94.953	Ailuropoda_melanoleuca
ENSMFAG00000003824	TNRC6A	99	80.765	ENSAPLG00000009978	TNRC6A	100	80.714	Anas_platyrhynchos
ENSMFAG00000003824	TNRC6A	95	54.696	ENSACAG00000011857	TNRC6A	94	56.816	Anolis_carolinensis
ENSMFAG00000003824	TNRC6A	99	97.400	ENSANAG00000025252	TNRC6A	98	97.394	Aotus_nancymaae
ENSMFAG00000003824	TNRC6A	92	55.776	ENSAMXG00000019919	tnrc6a	99	55.304	Astyanax_mexicanus
ENSMFAG00000003824	TNRC6A	100	93.673	ENSBTAG00000017999	TNRC6A	100	93.313	Bos_taurus
ENSMFAG00000003824	TNRC6A	99	97.815	ENSCJAG00000020677	TNRC6A	97	97.815	Callithrix_jacchus
ENSMFAG00000003824	TNRC6A	99	94.901	ENSCAFG00000017531	TNRC6A	97	94.901	Canis_familiaris
ENSMFAG00000003824	TNRC6A	99	93.809	ENSCAFG00020021160	TNRC6A	99	93.757	Canis_lupus_dingo
ENSMFAG00000003824	TNRC6A	99	91.223	ENSCHIG00000019448	TNRC6A	99	89.766	Capra_hircus
ENSMFAG00000003824	TNRC6A	99	95.161	ENSTSYG00000012711	TNRC6A	99	95.046	Carlito_syrichta
ENSMFAG00000003824	TNRC6A	99	92.163	ENSCPOG00000036684	TNRC6A	97	92.163	Cavia_porcellus
ENSMFAG00000003824	TNRC6A	99	97.763	ENSCCAG00000033664	TNRC6A	99	97.711	Cebus_capucinus
ENSMFAG00000003824	TNRC6A	99	99.530	ENSCATG00000019284	TNRC6A	97	99.530	Cercocebus_atys
ENSMFAG00000003824	TNRC6A	99	88.036	ENSCLAG00000010217	TNRC6A	97	88.036	Chinchilla_lanigera
ENSMFAG00000003824	TNRC6A	99	98.023	ENSCSAG00000006561	TNRC6A	97	98.023	Chlorocebus_sabaeus
ENSMFAG00000003824	TNRC6A	94	90.780	ENSCHOG00000009374	TNRC6A	92	90.780	Choloepus_hoffmanni
ENSMFAG00000003824	TNRC6A	92	79.607	ENSCPBG00000001881	TNRC6A	99	79.607	Chrysemys_picta_bellii
ENSMFAG00000003824	TNRC6A	100	97.677	ENSCANG00000041549	TNRC6A	99	97.677	Colobus_angolensis_palliatus
ENSMFAG00000003824	TNRC6A	99	93.136	ENSCGRG00001015021	Tnrc6a	99	92.980	Cricetulus_griseus_chok1gshd
ENSMFAG00000003824	TNRC6A	92	55.881	ENSDARG00000079688	tnrc6a	99	55.911	Danio_rerio
ENSMFAG00000003824	TNRC6A	99	92.531	ENSDNOG00000013989	TNRC6A	99	92.479	Dasypus_novemcinctus
ENSMFAG00000003824	TNRC6A	99	84.183	ENSETEG00000014658	TNRC6A	99	84.183	Echinops_telfairi
ENSMFAG00000003824	TNRC6A	99	94.384	ENSEASG00005017693	TNRC6A	99	94.344	Equus_asinus_asinus
ENSMFAG00000003824	TNRC6A	99	94.384	ENSECAG00000025056	TNRC6A	99	94.488	Equus_caballus
ENSMFAG00000003824	TNRC6A	99	88.456	ENSEEUG00000004530	TNRC6A	99	88.404	Erinaceus_europaeus
ENSMFAG00000003824	TNRC6A	99	93.861	ENSFCAG00000025236	TNRC6A	99	93.809	Felis_catus
ENSMFAG00000003824	TNRC6A	99	78.091	ENSFALG00000003757	TNRC6A	97	78.491	Ficedula_albicollis
ENSMFAG00000003824	TNRC6A	92	79.978	ENSGALG00000006068	TNRC6A	99	80.034	Gallus_gallus
ENSMFAG00000003824	TNRC6A	92	79.015	ENSGAGG00000023209	TNRC6A	99	79.127	Gopherus_agassizii
ENSMFAG00000003824	TNRC6A	99	97.711	ENSGGOG00000005137	TNRC6A	99	97.057	Gorilla_gorilla
ENSMFAG00000003824	TNRC6A	99	91.047	ENSHGLG00000012474	-	97	90.942	Heterocephalus_glaber_female
ENSMFAG00000003824	TNRC6A	95	72.643	ENSHGLG00000007368	-	93	72.316	Heterocephalus_glaber_female
ENSMFAG00000003824	TNRC6A	98	90.399	ENSHGLG00100012496	-	97	90.399	Heterocephalus_glaber_male
ENSMFAG00000003824	TNRC6A	99	94.797	ENSSTOG00000023394	TNRC6A	96	94.849	Ictidomys_tridecemlineatus
ENSMFAG00000003824	TNRC6A	99	68.654	ENSLACG00000006277	TNRC6A	100	69.322	Latimeria_chalumnae
ENSMFAG00000003824	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	90	83.223	Lepisosteus_oculatus
ENSMFAG00000003824	TNRC6A	99	91.227	ENSLAFG00000004209	TNRC6A	99	89.085	Loxodonta_africana
ENSMFAG00000003824	TNRC6A	99	98.907	ENSMMUG00000020428	TNRC6A	97	98.907	Macaca_mulatta
ENSMFAG00000003824	TNRC6A	100	99.793	ENSMNEG00000034854	TNRC6A	100	99.793	Macaca_nemestrina
ENSMFAG00000003824	TNRC6A	99	98.749	ENSMLEG00000042737	TNRC6A	97	98.749	Mandrillus_leucophaeus
ENSMFAG00000003824	TNRC6A	95	81.691	ENSMGAG00000006455	TNRC6A	93	81.691	Meleagris_gallopavo
ENSMFAG00000003824	TNRC6A	99	96.722	ENSMICG00000030685	TNRC6A	98	96.670	Microcebus_murinus
ENSMFAG00000003824	TNRC6A	99	80.904	ENSMODG00000016348	TNRC6A	96	81.056	Monodelphis_domestica
ENSMFAG00000003824	TNRC6A	99	89.707	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.319	Mus_caroli
ENSMFAG00000003824	TNRC6A	72	93.959	ENSMUSG00000052707	Tnrc6a	99	93.674	Mus_musculus
ENSMFAG00000003824	TNRC6A	99	90.444	MGP_PahariEiJ_G0013635	Tnrc6a	100	93.959	Mus_pahari
ENSMFAG00000003824	TNRC6A	99	92.356	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.674	Mus_spretus
ENSMFAG00000003824	TNRC6A	99	81.136	ENSMPUG00000012324	TNRC6A	100	78.516	Mustela_putorius_furo
ENSMFAG00000003824	TNRC6A	99	91.623	ENSMLUG00000002701	TNRC6A	100	91.623	Myotis_lucifugus
ENSMFAG00000003824	TNRC6A	99	97.811	ENSNLEG00000011851	TNRC6A	98	97.811	Nomascus_leucogenys
ENSMFAG00000003824	TNRC6A	76	87.363	ENSMEUG00000015959	-	74	87.363	Notamacropus_eugenii
ENSMFAG00000003824	TNRC6A	95	99.627	ENSOPRG00000005819	TNRC6A	93	99.627	Ochotona_princeps
ENSMFAG00000003824	TNRC6A	99	86.925	ENSODEG00000012802	TNRC6A	97	86.663	Octodon_degus
ENSMFAG00000003824	TNRC6A	88	82.353	ENSOANG00000007672	TNRC6A	99	82.346	Ornithorhynchus_anatinus
ENSMFAG00000003824	TNRC6A	99	91.680	ENSOCUG00000004325	TNRC6A	100	91.628	Oryctolagus_cuniculus
ENSMFAG00000003824	TNRC6A	99	95.582	ENSOGAG00000006666	TNRC6A	98	95.582	Otolemur_garnettii
ENSMFAG00000003824	TNRC6A	99	92.547	ENSOARG00000017950	TNRC6A	98	92.184	Ovis_aries
ENSMFAG00000003824	TNRC6A	99	97.867	ENSPPAG00000028379	TNRC6A	99	97.212	Pan_paniscus
ENSMFAG00000003824	TNRC6A	99	93.861	ENSPPRG00000005861	TNRC6A	97	93.809	Panthera_pardus
ENSMFAG00000003824	TNRC6A	99	93.392	ENSPTIG00000006346	TNRC6A	97	93.444	Panthera_tigris_altaica
ENSMFAG00000003824	TNRC6A	99	97.265	ENSPTRG00000007898	TNRC6A	99	97.265	Pan_troglodytes
ENSMFAG00000003824	TNRC6A	99	97.358	ENSPANG00000018523	TNRC6A	99	97.358	Papio_anubis
ENSMFAG00000003824	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	96	78.146	Paramormyrops_kingsleyae
ENSMFAG00000003824	TNRC6A	78	74.411	ENSPSIG00000003965	TNRC6A	100	74.411	Pelodiscus_sinensis
ENSMFAG00000003824	TNRC6A	99	91.432	ENSPEMG00000016318	Tnrc6a	97	91.223	Peromyscus_maniculatus_bairdii
ENSMFAG00000003824	TNRC6A	99	82.719	ENSPCIG00000012106	TNRC6A	99	82.667	Phascolarctos_cinereus
ENSMFAG00000003824	TNRC6A	99	97.399	ENSPPYG00000007202	TNRC6A	97	97.399	Pongo_abelii
ENSMFAG00000003824	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	91	100.000	Procavia_capensis
ENSMFAG00000003824	TNRC6A	99	94.225	ENSPCOG00000010134	TNRC6A	97	94.225	Propithecus_coquereli
ENSMFAG00000003824	TNRC6A	88	70.264	ENSPVAG00000012066	TNRC6A	97	70.381	Pteropus_vampyrus
ENSMFAG00000003824	TNRC6A	99	93.163	ENSRNOG00000024737	Tnrc6a	97	92.906	Rattus_norvegicus
ENSMFAG00000003824	TNRC6A	100	99.070	ENSRBIG00000014222	TNRC6A	99	99.070	Rhinopithecus_bieti
ENSMFAG00000003824	TNRC6A	100	98.915	ENSRROG00000032360	TNRC6A	98	98.915	Rhinopithecus_roxellana
ENSMFAG00000003824	TNRC6A	99	96.514	ENSSBOG00000036197	TNRC6A	100	98.193	Saimiri_boliviensis_boliviensis
ENSMFAG00000003824	TNRC6A	92	81.198	ENSSHAG00000008811	TNRC6A	99	82.115	Sarcophilus_harrisii
ENSMFAG00000003824	TNRC6A	88	67.515	ENSSFOG00015008920	tnrc6a	99	63.910	Scleropages_formosus
ENSMFAG00000003824	TNRC6A	73	80.859	ENSSARG00000002479	TNRC6A	89	80.143	Sorex_araneus
ENSMFAG00000003824	TNRC6A	91	78.300	ENSSPUG00000010525	TNRC6A	100	78.300	Sphenodon_punctatus
ENSMFAG00000003824	TNRC6A	99	93.156	ENSSSCG00000038870	TNRC6A	100	96.620	Sus_scrofa
ENSMFAG00000003824	TNRC6A	99	77.339	ENSTGUG00000006142	TNRC6A	97	77.339	Taeniopygia_guttata
ENSMFAG00000003824	TNRC6A	99	92.924	ENSTBEG00000014965	TNRC6A	99	92.872	Tupaia_belangeri
ENSMFAG00000003824	TNRC6A	92	96.039	ENSTTRG00000002008	TNRC6A	90	96.039	Tursiops_truncatus
ENSMFAG00000003824	TNRC6A	82	91.162	ENSUAMG00000006656	-	94	91.162	Ursus_americanus
ENSMFAG00000003824	TNRC6A	100	94.239	ENSUMAG00000008274	TNRC6A	100	94.393	Ursus_maritimus
ENSMFAG00000003824	TNRC6A	53	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSMFAG00000003824	TNRC6A	96	100.000	ENSVVUG00000005380	TNRC6A	99	94.953	Vulpes_vulpes
ENSMFAG00000003824	TNRC6A	95	64.976	ENSXETG00000030437	TNRC6A	99	65.376	Xenopus_tropicalis