EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000003862 (Gene tree)
Gene ID: 102143861
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 202503 bases
Position: chr10:10829550-11032052
Accession: 102143861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000035171	Ago_hook	PF10427.9	9.3e-21	1	1
ENSMFAP00000035221	Ago_hook	PF10427.9	1.1e-19	1	1
ENSMFAP00000035195	Ago_hook	PF10427.9	1.4e-19	1	1
ENSMFAP00000035232	Ago_hook	PF10427.9	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000009472	TNRC6B-205	2181	-	ENSMFAP00000035237	726 (aa)	-	A0A2K5WDP2
ENSMFAT00000009406	TNRC6B-201	3060	XM_015457156	ENSMFAP00000035171	1019 (aa)	XP_015312642	A0A2K5WDI5
ENSMFAT00000009456	TNRC6B-203	5283	-	ENSMFAP00000035221	1760 (aa)	-	A0A2K5WDL9
ENSMFAT00000009467	TNRC6B-204	5250	-	ENSMFAP00000035232	1749 (aa)	-	A0A2K5WDN8
ENSMFAT00000009430	TNRC6B-202	5472	XM_005567203	ENSMFAP00000035195	1823 (aa)	XP_005567260	A0A2K5WDJ8

Gene Model

Click here to download ENSMFAG00000003862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000003862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000003862	TNRC6B	90	50.633	ENSMFAG00000043943	TNRC6C	99	36.740
ENSMFAG00000003862	TNRC6B	99	35.517	ENSMFAG00000003824	TNRC6A	99	35.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000003862	TNRC6B	100	98.909	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSMFAG00000003862	TNRC6B	99	96.618	ENSAMEG00000011025	TNRC6B	99	96.618	Ailuropoda_melanoleuca
ENSMFAG00000003862	TNRC6B	99	83.105	ENSAPLG00000009347	TNRC6B	100	85.437	Anas_platyrhynchos
ENSMFAG00000003862	TNRC6B	95	85.417	ENSACAG00000007281	TNRC6B	98	73.771	Anolis_carolinensis
ENSMFAG00000003862	TNRC6B	100	98.473	ENSANAG00000035042	TNRC6B	100	98.473	Aotus_nancymaae
ENSMFAG00000003862	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	82	47.059	Astyanax_mexicanus
ENSMFAG00000003862	TNRC6B	99	95.754	ENSBTAG00000021076	TNRC6B	99	95.402	Bos_taurus
ENSMFAG00000003862	TNRC6B	100	98.157	ENSCJAG00000002732	TNRC6B	100	100.000	Callithrix_jacchus
ENSMFAG00000003862	TNRC6B	99	96.411	ENSCAFG00000001255	TNRC6B	99	96.411	Canis_familiaris
ENSMFAG00000003862	TNRC6B	99	96.560	ENSCAFG00020002189	TNRC6B	99	94.845	Canis_lupus_dingo
ENSMFAG00000003862	TNRC6B	98	98.193	ENSCHIG00000003491	TNRC6B	99	95.660	Capra_hircus
ENSMFAG00000003862	TNRC6B	100	97.471	ENSTSYG00000011836	TNRC6B	100	97.471	Carlito_syrichta
ENSMFAG00000003862	TNRC6B	99	96.907	ENSCPOG00000005705	TNRC6B	98	97.072	Cavia_porcellus
ENSMFAG00000003862	TNRC6B	100	98.300	ENSCCAG00000019912	TNRC6B	100	98.300	Cebus_capucinus
ENSMFAG00000003862	TNRC6B	100	99.902	ENSCATG00000029291	TNRC6B	100	99.902	Cercocebus_atys
ENSMFAG00000003862	TNRC6B	99	97.077	ENSCLAG00000016942	TNRC6B	97	97.023	Chinchilla_lanigera
ENSMFAG00000003862	TNRC6B	99	95.970	ENSCSAG00000006021	TNRC6B	98	95.970	Chlorocebus_sabaeus
ENSMFAG00000003862	TNRC6B	61	95.604	ENSCHOG00000010004	-	61	98.901	Choloepus_hoffmanni
ENSMFAG00000003862	TNRC6B	92	86.538	ENSCPBG00000022932	TNRC6B	99	86.883	Chrysemys_picta_bellii
ENSMFAG00000003862	TNRC6B	100	99.127	ENSCANG00000030776	TNRC6B	100	99.127	Colobus_angolensis_palliatus
ENSMFAG00000003862	TNRC6B	95	95.457	ENSCGRG00001020166	Tnrc6b	95	95.278	Cricetulus_griseus_chok1gshd
ENSMFAG00000003862	TNRC6B	99	95.356	ENSCGRG00000016696	Tnrc6b	98	95.345	Cricetulus_griseus_crigri
ENSMFAG00000003862	TNRC6B	100	96.222	ENSDNOG00000012744	TNRC6B	99	95.531	Dasypus_novemcinctus
ENSMFAG00000003862	TNRC6B	100	96.200	ENSDORG00000003386	Tnrc6b	97	96.536	Dipodomys_ordii
ENSMFAG00000003862	TNRC6B	99	85.632	ENSETEG00000006570	TNRC6B	98	85.920	Echinops_telfairi
ENSMFAG00000003862	TNRC6B	99	96.961	ENSEASG00005005306	TNRC6B	99	96.241	Equus_asinus_asinus
ENSMFAG00000003862	TNRC6B	100	96.471	ENSECAG00000009759	TNRC6B	98	99.500	Equus_caballus
ENSMFAG00000003862	TNRC6B	75	94.139	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSMFAG00000003862	TNRC6B	52	61.258	ENSELUG00000019468	-	71	63.816	Esox_lucius
ENSMFAG00000003862	TNRC6B	100	96.361	ENSFCAG00000004791	TNRC6B	100	96.361	Felis_catus
ENSMFAG00000003862	TNRC6B	97	88.850	ENSFALG00000012195	TNRC6B	100	88.791	Ficedula_albicollis
ENSMFAG00000003862	TNRC6B	99	96.959	ENSFDAG00000021368	TNRC6B	96	97.125	Fukomys_damarensis
ENSMFAG00000003862	TNRC6B	99	89.323	ENSGALG00000012050	TNRC6B	96	89.323	Gallus_gallus
ENSMFAG00000003862	TNRC6B	99	88.838	ENSGAGG00000025188	TNRC6B	98	88.585	Gopherus_agassizii
ENSMFAG00000003862	TNRC6B	100	98.855	ENSGGOG00000008444	TNRC6B	100	98.855	Gorilla_gorilla
ENSMFAG00000003862	TNRC6B	100	96.308	ENSHGLG00000009306	TNRC6B	100	96.308	Heterocephalus_glaber_female
ENSMFAG00000003862	TNRC6B	99	97.067	ENSHGLG00100018108	TNRC6B	98	96.900	Heterocephalus_glaber_male
ENSMFAG00000003862	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	93	45.372	Ictalurus_punctatus
ENSMFAG00000003862	TNRC6B	100	96.095	ENSSTOG00000008927	TNRC6B	96	97.233	Ictidomys_tridecemlineatus
ENSMFAG00000003862	TNRC6B	100	94.693	ENSJJAG00000015779	Tnrc6b	96	95.512	Jaculus_jaculus
ENSMFAG00000003862	TNRC6B	96	78.808	ENSLACG00000000628	-	98	61.947	Latimeria_chalumnae
ENSMFAG00000003862	TNRC6B	82	95.261	ENSLAFG00000014473	TNRC6B	100	96.159	Loxodonta_africana
ENSMFAG00000003862	TNRC6B	100	99.125	ENSMMUG00000021345	TNRC6B	100	99.125	Macaca_mulatta
ENSMFAG00000003862	TNRC6B	100	99.886	ENSMNEG00000042745	TNRC6B	100	99.886	Macaca_nemestrina
ENSMFAG00000003862	TNRC6B	100	100.000	ENSMLEG00000041780	TNRC6B	100	99.509	Mandrillus_leucophaeus
ENSMFAG00000003862	TNRC6B	99	88.943	ENSMGAG00000012333	TNRC6B	99	88.779	Meleagris_gallopavo
ENSMFAG00000003862	TNRC6B	99	95.183	ENSMAUG00000016123	Tnrc6b	96	95.287	Mesocricetus_auratus
ENSMFAG00000003862	TNRC6B	100	97.278	ENSMICG00000014056	TNRC6B	100	97.278	Microcebus_murinus
ENSMFAG00000003862	TNRC6B	96	96.000	ENSMOCG00000020334	Tnrc6b	96	96.000	Microtus_ochrogaster
ENSMFAG00000003862	TNRC6B	64	80.645	ENSMMOG00000002799	si:dkey-217f16.6	58	69.388	Mola_mola
ENSMFAG00000003862	TNRC6B	100	94.582	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	95.402	Mus_caroli
ENSMFAG00000003862	TNRC6B	100	94.700	ENSMUSG00000047888	Tnrc6b	96	95.230	Mus_musculus
ENSMFAG00000003862	TNRC6B	99	94.664	MGP_PahariEiJ_G0020045	Tnrc6b	96	94.997	Mus_pahari
ENSMFAG00000003862	TNRC6B	100	94.817	MGP_SPRETEiJ_G0020941	Tnrc6b	97	95.022	Mus_spretus
ENSMFAG00000003862	TNRC6B	97	97.714	ENSMPUG00000016442	TNRC6B	100	92.663	Mustela_putorius_furo
ENSMFAG00000003862	TNRC6B	99	96.234	ENSMLUG00000008765	TNRC6B	99	96.234	Myotis_lucifugus
ENSMFAG00000003862	TNRC6B	100	94.366	ENSNGAG00000021294	Tnrc6b	96	95.465	Nannospalax_galili
ENSMFAG00000003862	TNRC6B	100	98.738	ENSNLEG00000015311	TNRC6B	100	98.738	Nomascus_leucogenys
ENSMFAG00000003862	TNRC6B	99	89.940	ENSOPRG00000012054	TNRC6B	86	93.532	Ochotona_princeps
ENSMFAG00000003862	TNRC6B	99	97.135	ENSODEG00000013146	TNRC6B	96	97.300	Octodon_degus
ENSMFAG00000003862	TNRC6B	89	68.889	ENSONIG00000019679	-	94	44.985	Oreochromis_niloticus
ENSMFAG00000003862	TNRC6B	100	96.560	ENSOCUG00000016128	TNRC6B	96	96.661	Oryctolagus_cuniculus
ENSMFAG00000003862	TNRC6B	100	97.062	ENSOGAG00000011096	TNRC6B	100	97.062	Otolemur_garnettii
ENSMFAG00000003862	TNRC6B	100	94.731	ENSOARG00000017238	TNRC6B	96	95.488	Ovis_aries
ENSMFAG00000003862	TNRC6B	100	98.909	ENSPPAG00000028514	TNRC6B	100	98.909	Pan_paniscus
ENSMFAG00000003862	TNRC6B	100	97.184	ENSPPRG00000017741	TNRC6B	100	97.184	Panthera_pardus
ENSMFAG00000003862	TNRC6B	99	92.081	ENSPTIG00000022064	TNRC6B	98	93.590	Panthera_tigris_altaica
ENSMFAG00000003862	TNRC6B	100	99.018	ENSPTRG00000047826	TNRC6B	100	99.371	Pan_troglodytes
ENSMFAG00000003862	TNRC6B	98	91.172	ENSPANG00000009271	TNRC6B	98	98.246	Papio_anubis
ENSMFAG00000003862	TNRC6B	99	88.717	ENSPSIG00000005318	TNRC6B	98	88.774	Pelodiscus_sinensis
ENSMFAG00000003862	TNRC6B	99	94.562	ENSPEMG00000011403	Tnrc6b	96	94.894	Peromyscus_maniculatus_bairdii
ENSMFAG00000003862	TNRC6B	99	87.064	ENSPCIG00000020347	TNRC6B	99	87.350	Phascolarctos_cinereus
ENSMFAG00000003862	TNRC6B	92	56.667	ENSPFOG00000006033	-	96	43.238	Poecilia_formosa
ENSMFAG00000003862	TNRC6B	86	69.863	ENSPLAG00000001418	-	76	48.080	Poecilia_latipinna
ENSMFAG00000003862	TNRC6B	99	93.360	ENSPPYG00000011849	TNRC6B	100	95.824	Pongo_abelii
ENSMFAG00000003862	TNRC6B	95	87.199	ENSPCAG00000008739	TNRC6B	74	92.798	Procavia_capensis
ENSMFAG00000003862	TNRC6B	100	97.496	ENSPCOG00000020790	TNRC6B	100	97.496	Propithecus_coquereli
ENSMFAG00000003862	TNRC6B	92	95.710	ENSPVAG00000004975	TNRC6B	91	95.343	Pteropus_vampyrus
ENSMFAG00000003862	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	71	47.572	Pygocentrus_nattereri
ENSMFAG00000003862	TNRC6B	99	94.920	ENSRNOG00000024907	Tnrc6b	96	94.908	Rattus_norvegicus
ENSMFAG00000003862	TNRC6B	100	99.181	ENSRBIG00000035576	TNRC6B	100	99.181	Rhinopithecus_bieti
ENSMFAG00000003862	TNRC6B	100	99.127	ENSRROG00000031135	TNRC6B	100	99.127	Rhinopithecus_roxellana
ENSMFAG00000003862	TNRC6B	99	97.030	ENSSBOG00000029743	TNRC6B	100	98.462	Saimiri_boliviensis_boliviensis
ENSMFAG00000003862	TNRC6B	99	87.111	ENSSHAG00000009692	TNRC6B	99	87.220	Sarcophilus_harrisii
ENSMFAG00000003862	TNRC6B	74	84.746	ENSSARG00000007971	-	70	88.636	Sorex_araneus
ENSMFAG00000003862	TNRC6B	92	87.938	ENSSPUG00000010801	TNRC6B	100	87.819	Sphenodon_punctatus
ENSMFAG00000003862	TNRC6B	100	96.331	ENSSSCG00000000078	TNRC6B	99	96.327	Sus_scrofa
ENSMFAG00000003862	TNRC6B	93	82.864	ENSTGUG00000010138	-	98	84.081	Taeniopygia_guttata
ENSMFAG00000003862	TNRC6B	99	94.681	ENSTTRG00000011465	TNRC6B	95	96.817	Tursiops_truncatus
ENSMFAG00000003862	TNRC6B	99	96.745	ENSUAMG00000007174	TNRC6B	98	96.745	Ursus_americanus
ENSMFAG00000003862	TNRC6B	99	97.011	ENSUMAG00000014336	TNRC6B	100	96.927	Ursus_maritimus
ENSMFAG00000003862	TNRC6B	82	93.617	ENSVPAG00000001467	TNRC6B	70	89.398	Vicugna_pacos
ENSMFAG00000003862	TNRC6B	100	96.122	ENSVVUG00000007064	TNRC6B	98	96.845	Vulpes_vulpes
ENSMFAG00000003862	TNRC6B	71	48.849	ENSXCOG00000003042	-	98	38.218	Xiphophorus_couchianus