EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000007154 (Gene tree)
Gene ID: 101926207
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 9547 bases
Position: chr1:118105148-118114694
Accession: 101926207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000010384	PRP38	PF03371.15	2.6e-57	1	1
ENSMFAP00000010385	PRP38	PF03371.15	1.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000040358	PRPF38B-201	3705	XM_005542529	ENSMFAP00000010384	546 (aa)	XP_005542586	G8F4J3
ENSMFAT00000040361	PRPF38B-202	573	-	ENSMFAP00000010385	190 (aa)	-	A0A2K5UDF2

Gene Model

Click here to download ENSMFAG00000007154's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000007154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000007154	PRPF38B	100	100.000	ENSCATG00000021195	PRPF38B	100	100.000	Cercocebus_atys
ENSMFAG00000007154	PRPF38B	100	100.000	ENSMLEG00000017206	PRPF38B	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000007154	PRPF38B	96	91.445	ENSMLUG00000010415	-	97	88.845	Myotis_lucifugus
ENSMFAG00000007154	PRPF38B	89	92.941	ENSMLUG00000023095	-	97	87.344	Myotis_lucifugus
ENSMFAG00000007154	PRPF38B	92	87.649	ENSSHAG00000016924	PRPF38B	99	87.649	Sarcophilus_harrisii