EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000020113 (Gene tree)
Gene ID: 101865242
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 23940 bases
Position: chr16:7996137-8020076
Accession: 101865242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000012676	ResIII	PF04851.15	2.9e-08	1	1
ENSMFAP00000012601	ResIII	PF04851.15	3e-08	1	1
ENSMFAP00000012587	ResIII	PF04851.15	3.1e-08	1	1
ENSMFAP00000012667	ResIII	PF04851.15	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000059611	CHD3-203	5928	-	ENSMFAP00000012667	1975 (aa)	-	A0A2K5UJV6
ENSMFAT00000059180	CHD3-201	7341	XM_005582803	ENSMFAP00000012587	2000 (aa)	XP_005582860	A0A2K5UJJ5
ENSMFAT00000059256	CHD3-202	7239	XM_005582804	ENSMFAP00000012601	1966 (aa)	XP_005582861	A0A2K5UJP5
ENSMFAT00000059660	CHD3-204	5427	XM_015437616	ENSMFAP00000012676	1808 (aa)	XP_015293102	A0A2K5UJU6
ENSMFAT00000059777	CHD3-205	1113	-	ENSMFAP00000012691	370 (aa)	-	A0A2K5UJW0

Gene Model

Click here to download ENSMFAG00000020113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000020113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000020113	CHD3	98	67.377	ENSMFAG00000033993	CHD5	98	71.530
ENSMFAG00000020113	CHD3	50	36.691	ENSMFAG00000032830	CHD6	88	42.885
ENSMFAG00000020113	CHD3	95	69.291	ENSMFAG00000003188	-	96	70.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000020113	CHD3	100	99.644	ENSG00000170004	CHD3	100	99.644	Homo_sapiens
ENSMFAG00000020113	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSMFAG00000020113	CHD3	74	94.868	ENSAMEG00000003025	-	100	97.214	Ailuropoda_melanoleuca
ENSMFAG00000020113	CHD3	87	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSMFAG00000020113	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSMFAG00000020113	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSMFAG00000020113	CHD3	91	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSMFAG00000020113	CHD3	99	83.703	ENSACAG00000004276	CHD3	96	84.677	Anolis_carolinensis
ENSMFAG00000020113	CHD3	99	97.596	ENSANAG00000034323	CHD3	99	99.200	Aotus_nancymaae
ENSMFAG00000020113	CHD3	93	78.816	ENSACLG00000009222	chd3	99	74.699	Astatotilapia_calliptera
ENSMFAG00000020113	CHD3	98	98.325	ENSBTAG00000014377	CHD3	97	98.333	Bos_taurus
ENSMFAG00000020113	CHD3	99	99.236	ENSCJAG00000014766	CHD3	99	99.236	Callithrix_jacchus
ENSMFAG00000020113	CHD3	100	97.751	ENSCAFG00000016859	CHD3	100	97.751	Canis_familiaris
ENSMFAG00000020113	CHD3	99	96.505	ENSCAFG00020007422	CHD3	100	98.254	Canis_lupus_dingo
ENSMFAG00000020113	CHD3	99	98.484	ENSCHIG00000016737	CHD3	100	98.484	Capra_hircus
ENSMFAG00000020113	CHD3	100	98.882	ENSTSYG00000035658	CHD3	100	98.882	Carlito_syrichta
ENSMFAG00000020113	CHD3	99	94.681	ENSCAPG00000014864	CHD3	99	94.681	Cavia_aperea
ENSMFAG00000020113	CHD3	99	97.190	ENSCPOG00000022653	CHD3	99	97.190	Cavia_porcellus
ENSMFAG00000020113	CHD3	100	99.000	ENSCCAG00000034792	CHD3	100	99.000	Cebus_capucinus
ENSMFAG00000020113	CHD3	100	99.950	ENSCATG00000041717	CHD3	100	99.950	Cercocebus_atys
ENSMFAG00000020113	CHD3	98	98.448	ENSCLAG00000010523	CHD3	100	98.448	Chinchilla_lanigera
ENSMFAG00000020113	CHD3	98	99.644	ENSCSAG00000011122	CHD3	100	99.644	Chlorocebus_sabaeus
ENSMFAG00000020113	CHD3	92	84.906	ENSCPBG00000011966	CHD3	99	87.725	Chrysemys_picta_bellii
ENSMFAG00000020113	CHD3	100	99.847	ENSCANG00000037641	CHD3	100	99.847	Colobus_angolensis_palliatus
ENSMFAG00000020113	CHD3	98	97.622	ENSCGRG00001011306	Chd3	100	97.622	Cricetulus_griseus_chok1gshd
ENSMFAG00000020113	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSMFAG00000020113	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSMFAG00000020113	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSMFAG00000020113	CHD3	98	74.429	ENSDARG00000021405	chd3	99	76.427	Danio_rerio
ENSMFAG00000020113	CHD3	98	83.713	ENSDNOG00000047846	CHD3	98	83.713	Dasypus_novemcinctus
ENSMFAG00000020113	CHD3	98	97.878	ENSDORG00000010713	Chd3	100	97.878	Dipodomys_ordii
ENSMFAG00000020113	CHD3	98	91.457	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSMFAG00000020113	CHD3	58	75.205	ENSEBUG00000008310	chd3	99	70.313	Eptatretus_burgeri
ENSMFAG00000020113	CHD3	99	96.887	ENSEASG00005019360	CHD3	100	98.636	Equus_asinus_asinus
ENSMFAG00000020113	CHD3	99	96.942	ENSECAG00000010051	CHD3	100	98.691	Equus_caballus
ENSMFAG00000020113	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSMFAG00000020113	CHD3	83	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMFAG00000020113	CHD3	98	98.070	ENSFCAG00000009629	CHD3	96	98.070	Felis_catus
ENSMFAG00000020113	CHD3	99	96.450	ENSFDAG00000008220	CHD3	99	95.411	Fukomys_damarensis
ENSMFAG00000020113	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSMFAG00000020113	CHD3	59	76.966	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSMFAG00000020113	CHD3	99	70.623	ENSGACG00000019275	chd3	100	70.947	Gasterosteus_aculeatus
ENSMFAG00000020113	CHD3	81	83.467	ENSGAGG00000013164	CHD3	98	87.033	Gopherus_agassizii
ENSMFAG00000020113	CHD3	100	99.491	ENSGGOG00000013496	CHD3	100	99.491	Gorilla_gorilla
ENSMFAG00000020113	CHD3	98	98.398	ENSHGLG00000012017	CHD3	99	97.297	Heterocephalus_glaber_female
ENSMFAG00000020113	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSMFAG00000020113	CHD3	96	72.340	ENSHCOG00000010170	chd3	96	72.908	Hippocampus_comes
ENSMFAG00000020113	CHD3	90	78.282	ENSIPUG00000003271	chd3	96	80.777	Ictalurus_punctatus
ENSMFAG00000020113	CHD3	99	98.398	ENSSTOG00000025907	CHD3	100	98.913	Ictidomys_tridecemlineatus
ENSMFAG00000020113	CHD3	100	96.652	ENSJJAG00000017633	Chd3	100	97.724	Jaculus_jaculus
ENSMFAG00000020113	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	75.795	Kryptolebias_marmoratus
ENSMFAG00000020113	CHD3	92	75.287	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSMFAG00000020113	CHD3	98	73.291	ENSLACG00000008031	CHD3	99	74.274	Latimeria_chalumnae
ENSMFAG00000020113	CHD3	99	76.630	ENSLOCG00000013965	chd3	97	77.174	Lepisosteus_oculatus
ENSMFAG00000020113	CHD3	94	94.383	ENSLAFG00000000572	CHD3	100	94.383	Loxodonta_africana
ENSMFAG00000020113	CHD3	100	97.650	ENSMMUG00000022221	CHD3	100	97.650	Macaca_mulatta
ENSMFAG00000020113	CHD3	100	99.900	ENSMNEG00000001728	CHD3	100	99.900	Macaca_nemestrina
ENSMFAG00000020113	CHD3	100	99.950	ENSMLEG00000032249	CHD3	100	99.950	Mandrillus_leucophaeus
ENSMFAG00000020113	CHD3	92	73.399	ENSMAMG00000000564	chd3	99	77.243	Mastacembelus_armatus
ENSMFAG00000020113	CHD3	99	96.968	ENSMAUG00000013873	Chd3	99	94.314	Mesocricetus_auratus
ENSMFAG00000020113	CHD3	98	98.883	ENSMICG00000008741	CHD3	100	95.563	Microcebus_murinus
ENSMFAG00000020113	CHD3	98	97.823	ENSMOCG00000004848	Chd3	100	97.823	Microtus_ochrogaster
ENSMFAG00000020113	CHD3	98	73.749	ENSMMOG00000012699	chd3	99	74.015	Mola_mola
ENSMFAG00000020113	CHD3	99	91.157	ENSMODG00000007509	CHD3	100	94.667	Monodelphis_domestica
ENSMFAG00000020113	CHD3	98	97.472	MGP_CAROLIEiJ_G0016564	Chd3	100	97.561	Mus_caroli
ENSMFAG00000020113	CHD3	98	97.472	ENSMUSG00000018474	Chd3	99	97.561	Mus_musculus
ENSMFAG00000020113	CHD3	98	97.574	MGP_PahariEiJ_G0017695	Chd3	100	97.666	Mus_pahari
ENSMFAG00000020113	CHD3	98	97.472	MGP_SPRETEiJ_G0017400	Chd3	100	97.561	Mus_spretus
ENSMFAG00000020113	CHD3	93	96.091	ENSMPUG00000008861	CHD3	100	97.958	Mustela_putorius_furo
ENSMFAG00000020113	CHD3	100	96.953	ENSMLUG00000014643	-	100	96.953	Myotis_lucifugus
ENSMFAG00000020113	CHD3	99	97.229	ENSNGAG00000000773	Chd3	99	97.229	Nannospalax_galili
ENSMFAG00000020113	CHD3	92	73.604	ENSNBRG00000000636	chd3	98	75.899	Neolamprologus_brichardi
ENSMFAG00000020113	CHD3	98	96.729	ENSNLEG00000009770	CHD3	100	96.729	Nomascus_leucogenys
ENSMFAG00000020113	CHD3	86	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSMFAG00000020113	CHD3	99	94.863	ENSOPRG00000011069	CHD3	100	96.688	Ochotona_princeps
ENSMFAG00000020113	CHD3	99	97.437	ENSODEG00000017785	CHD3	100	97.437	Octodon_degus
ENSMFAG00000020113	CHD3	98	74.561	ENSONIG00000009292	chd3	100	75.013	Oreochromis_niloticus
ENSMFAG00000020113	CHD3	98	93.639	ENSOCUG00000029299	CHD3	100	93.540	Oryctolagus_cuniculus
ENSMFAG00000020113	CHD3	84	69.695	ENSORLG00000007107	chd3	93	71.789	Oryzias_latipes
ENSMFAG00000020113	CHD3	57	75.315	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSMFAG00000020113	CHD3	76	78.174	ENSOMEG00000013691	chd3	99	78.188	Oryzias_melastigma
ENSMFAG00000020113	CHD3	98	98.325	ENSOGAG00000003216	CHD3	100	98.325	Otolemur_garnettii
ENSMFAG00000020113	CHD3	99	95.706	ENSOARG00000017855	CHD3	99	95.706	Ovis_aries
ENSMFAG00000020113	CHD3	100	97.655	ENSPPAG00000032886	CHD3	100	97.655	Pan_paniscus
ENSMFAG00000020113	CHD3	99	97.660	ENSPPRG00000000626	CHD3	99	97.660	Panthera_pardus
ENSMFAG00000020113	CHD3	100	99.695	ENSPTRG00000008714	CHD3	100	99.695	Pan_troglodytes
ENSMFAG00000020113	CHD3	100	99.950	ENSPANG00000023938	CHD3	100	99.950	Papio_anubis
ENSMFAG00000020113	CHD3	97	78.019	ENSPKIG00000006305	chd3	99	79.254	Paramormyrops_kingsleyae
ENSMFAG00000020113	CHD3	60	90.676	ENSPSIG00000010177	CHD3	98	90.951	Pelodiscus_sinensis
ENSMFAG00000020113	CHD3	99	96.974	ENSPEMG00000014262	Chd3	100	96.974	Peromyscus_maniculatus_bairdii
ENSMFAG00000020113	CHD3	99	93.289	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSMFAG00000020113	CHD3	98	72.786	ENSPFOG00000012464	chd3	86	80.135	Poecilia_formosa
ENSMFAG00000020113	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSMFAG00000020113	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSMFAG00000020113	CHD3	91	84.502	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSMFAG00000020113	CHD3	100	94.650	ENSPPYG00000007940	CHD3	100	94.650	Pongo_abelii
ENSMFAG00000020113	CHD3	96	97.500	ENSPCAG00000004350	CHD3	96	97.649	Procavia_capensis
ENSMFAG00000020113	CHD3	100	98.252	ENSPCOG00000020952	CHD3	100	98.252	Propithecus_coquereli
ENSMFAG00000020113	CHD3	85	98.906	ENSPVAG00000016344	CHD3	87	97.412	Pteropus_vampyrus
ENSMFAG00000020113	CHD3	96	77.507	ENSPNAG00000020393	chd3	98	81.540	Pygocentrus_nattereri
ENSMFAG00000020113	CHD3	99	94.547	ENSRNOG00000009722	Chd3	100	96.678	Rattus_norvegicus
ENSMFAG00000020113	CHD3	100	96.691	ENSRBIG00000033562	CHD3	100	96.691	Rhinopithecus_bieti
ENSMFAG00000020113	CHD3	100	99.949	ENSRROG00000029554	CHD3	100	99.949	Rhinopithecus_roxellana
ENSMFAG00000020113	CHD3	100	99.186	ENSSBOG00000020719	CHD3	100	99.186	Saimiri_boliviensis_boliviensis
ENSMFAG00000020113	CHD3	98	94.912	ENSSHAG00000014412	CHD3	100	94.912	Sarcophilus_harrisii
ENSMFAG00000020113	CHD3	94	78.766	ENSSFOG00015023123	chd3	98	73.401	Scleropages_formosus
ENSMFAG00000020113	CHD3	86	91.304	ENSSMAG00000006451	chd3	99	77.117	Scophthalmus_maximus
ENSMFAG00000020113	CHD3	55	75.025	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSMFAG00000020113	CHD3	94	77.379	ENSSPAG00000013694	chd3	99	80.043	Stegastes_partitus
ENSMFAG00000020113	CHD3	99	98.124	ENSSSCG00000021363	CHD3	100	98.146	Sus_scrofa
ENSMFAG00000020113	CHD3	78	73.645	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSMFAG00000020113	CHD3	99	72.815	ENSTNIG00000012998	chd3	99	73.337	Tetraodon_nigroviridis
ENSMFAG00000020113	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSMFAG00000020113	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSMFAG00000020113	CHD3	99	95.267	ENSUAMG00000005475	CHD3	99	97.060	Ursus_americanus
ENSMFAG00000020113	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSMFAG00000020113	CHD3	99	96.505	ENSVVUG00000028011	CHD3	99	98.135	Vulpes_vulpes
ENSMFAG00000020113	CHD3	99	72.180	ENSXETG00000012991	chd3	92	73.820	Xenopus_tropicalis
ENSMFAG00000020113	CHD3	51	91.429	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSMFAG00000020113	CHD3	85	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus