EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000024592 (Gene tree)
Gene ID: 102120241
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 8642 bases
Position: chr5:109191714-109200355
Accession: 102120241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000012485	Gar1	PF04410.14	1.5e-38	1	1
ENSMFAP00000012492	Gar1	PF04410.14	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000058611	GAR1-202	657	-	ENSMFAP00000012492	218 (aa)	-	A0A2K5UJD2
ENSMFAT00000058572	GAR1-201	654	XM_005555668	ENSMFAP00000012485	217 (aa)	XP_005555725	A0A2K5UJ98

Gene Model

Click here to download ENSMFAG00000024592's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000024592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000024592	GAR1	50	84.259	ENSMFAG00000003572	-	54	82.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000024592	GAR1	100	99.539	ENSG00000109534	GAR1	100	99.539	Homo_sapiens
ENSMFAG00000024592	GAR1	50	98.165	ENSAMEG00000004605	GAR1	54	98.182	Ailuropoda_melanoleuca
ENSMFAG00000024592	GAR1	100	98.624	ENSANAG00000021608	GAR1	100	98.624	Aotus_nancymaae
ENSMFAG00000024592	GAR1	50	99.083	ENSBTAG00000000748	GAR1	52	99.091	Bos_taurus
ENSMFAG00000024592	GAR1	100	98.165	ENSCJAG00000004041	GAR1	100	98.165	Callithrix_jacchus
ENSMFAG00000024592	GAR1	51	99.091	ENSCHIG00000016026	-	53	99.091	Capra_hircus
ENSMFAG00000024592	GAR1	50	100.000	ENSTSYG00000013668	-	52	100.000	Carlito_syrichta
ENSMFAG00000024592	GAR1	66	81.944	ENSTSYG00000026632	-	56	91.818	Carlito_syrichta
ENSMFAG00000024592	GAR1	51	99.091	ENSCPOG00000004216	GAR1	51	99.091	Cavia_porcellus
ENSMFAG00000024592	GAR1	100	98.624	ENSCCAG00000029372	GAR1	100	98.624	Cebus_capucinus
ENSMFAG00000024592	GAR1	100	100.000	ENSCATG00000021854	GAR1	100	100.000	Cercocebus_atys
ENSMFAG00000024592	GAR1	51	97.273	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSMFAG00000024592	GAR1	90	98.462	ENSCSAG00000003922	GAR1	98	98.462	Chlorocebus_sabaeus
ENSMFAG00000024592	GAR1	53	99.138	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSMFAG00000024592	GAR1	100	99.078	ENSCANG00000039262	GAR1	100	99.078	Colobus_angolensis_palliatus
ENSMFAG00000024592	GAR1	50	96.330	ENSCGRG00001003919	Gar1	50	96.364	Cricetulus_griseus_chok1gshd
ENSMFAG00000024592	GAR1	50	99.083	ENSDNOG00000037632	GAR1	56	99.091	Dasypus_novemcinctus
ENSMFAG00000024592	GAR1	66	91.667	ENSDORG00000000482	Gar1	51	96.364	Dipodomys_ordii
ENSMFAG00000024592	GAR1	51	98.182	ENSEASG00005004658	GAR1	51	98.182	Equus_asinus_asinus
ENSMFAG00000024592	GAR1	51	99.091	ENSECAG00000013624	GAR1	56	99.091	Equus_caballus
ENSMFAG00000024592	GAR1	50	99.083	ENSFCAG00000040791	-	53	99.091	Felis_catus
ENSMFAG00000024592	GAR1	62	57.778	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSMFAG00000024592	GAR1	51	91.892	ENSFHEG00000008068	gar1	51	91.818	Fundulus_heteroclitus
ENSMFAG00000024592	GAR1	51	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSMFAG00000024592	GAR1	100	99.078	ENSGGOG00000008681	GAR1	100	99.078	Gorilla_gorilla
ENSMFAG00000024592	GAR1	51	90.000	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSMFAG00000024592	GAR1	50	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSMFAG00000024592	GAR1	51	89.189	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSMFAG00000024592	GAR1	80	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSMFAG00000024592	GAR1	100	100.000	ENSMMUG00000021225	GAR1	100	100.000	Macaca_mulatta
ENSMFAG00000024592	GAR1	100	100.000	ENSMNEG00000042594	GAR1	100	100.000	Macaca_nemestrina
ENSMFAG00000024592	GAR1	100	99.541	ENSMLEG00000002496	GAR1	100	99.541	Mandrillus_leucophaeus
ENSMFAG00000024592	GAR1	59	87.402	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSMFAG00000024592	GAR1	52	98.214	ENSMICG00000003326	GAR1	51	99.091	Microcebus_murinus
ENSMFAG00000024592	GAR1	50	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSMFAG00000024592	GAR1	69	74.497	ENSMALG00000009672	gar1	52	92.035	Monopterus_albus
ENSMFAG00000024592	GAR1	50	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSMFAG00000024592	GAR1	51	96.364	ENSMUSG00000028010	Gar1	90	86.034	Mus_musculus
ENSMFAG00000024592	GAR1	88	92.746	MGP_PahariEiJ_G0027076	Gar1	100	94.681	Mus_pahari
ENSMFAG00000024592	GAR1	51	96.364	MGP_SPRETEiJ_G0026580	Gar1	90	86.034	Mus_spretus
ENSMFAG00000024592	GAR1	50	99.083	ENSMPUG00000008615	GAR1	53	99.091	Mustela_putorius_furo
ENSMFAG00000024592	GAR1	100	93.750	ENSMLUG00000003776	GAR1	100	93.750	Myotis_lucifugus
ENSMFAG00000024592	GAR1	51	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSMFAG00000024592	GAR1	51	83.784	ENSNLEG00000034282	-	56	83.636	Nomascus_leucogenys
ENSMFAG00000024592	GAR1	100	97.696	ENSNLEG00000016578	GAR1	100	97.696	Nomascus_leucogenys
ENSMFAG00000024592	GAR1	50	99.083	ENSOCUG00000003901	GAR1	51	99.091	Oryctolagus_cuniculus
ENSMFAG00000024592	GAR1	54	89.744	ENSORLG00015017643	gar1	50	92.727	Oryzias_latipes_hsok
ENSMFAG00000024592	GAR1	50	99.083	ENSOGAG00000004693	GAR1	52	99.091	Otolemur_garnettii
ENSMFAG00000024592	GAR1	50	99.083	ENSOARG00000004910	GAR1	52	99.091	Ovis_aries
ENSMFAG00000024592	GAR1	100	99.083	ENSPPAG00000014081	GAR1	100	99.083	Pan_paniscus
ENSMFAG00000024592	GAR1	50	99.083	ENSPPRG00000023697	GAR1	53	99.091	Panthera_pardus
ENSMFAG00000024592	GAR1	50	99.083	ENSPTIG00000021565	GAR1	53	99.091	Panthera_tigris_altaica
ENSMFAG00000024592	GAR1	100	99.078	ENSPTRG00000016364	GAR1	100	99.078	Pan_troglodytes
ENSMFAG00000024592	GAR1	80	81.651	ENSPTRG00000049340	-	66	73.913	Pan_troglodytes
ENSMFAG00000024592	GAR1	100	99.078	ENSPANG00000000639	GAR1	100	99.078	Papio_anubis
ENSMFAG00000024592	GAR1	77	73.653	ENSPKIG00000018991	gar1	66	85.034	Paramormyrops_kingsleyae
ENSMFAG00000024592	GAR1	50	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSMFAG00000024592	GAR1	50	92.593	ENSPCIG00000018912	GAR1	52	87.805	Phascolarctos_cinereus
ENSMFAG00000024592	GAR1	100	99.078	ENSPPYG00000014996	GAR1	100	99.078	Pongo_abelii
ENSMFAG00000024592	GAR1	78	95.906	ENSRNOG00000061146	Gar1	100	95.906	Rattus_norvegicus
ENSMFAG00000024592	GAR1	100	99.539	ENSRBIG00000019547	GAR1	100	99.539	Rhinopithecus_bieti
ENSMFAG00000024592	GAR1	52	82.143	ENSRBIG00000042411	-	53	81.818	Rhinopithecus_bieti
ENSMFAG00000024592	GAR1	100	100.000	ENSRROG00000028454	GAR1	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000024592	GAR1	52	82.143	ENSRROG00000044348	-	53	81.818	Rhinopithecus_roxellana
ENSMFAG00000024592	GAR1	74	49.655	YHR089C	-	89	50.413	Saccharomyces_cerevisiae
ENSMFAG00000024592	GAR1	50	100.000	ENSSBOG00000024785	GAR1	51	100.000	Saimiri_boliviensis_boliviensis
ENSMFAG00000024592	GAR1	51	99.091	ENSSSCG00000009137	GAR1	54	99.091	Sus_scrofa
ENSMFAG00000024592	GAR1	50	99.083	ENSUMAG00000000776	GAR1	53	99.091	Ursus_maritimus
ENSMFAG00000024592	GAR1	50	99.083	ENSVVUG00000017612	GAR1	57	99.091	Vulpes_vulpes