EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000030331 (Gene tree)
Gene ID: 102135809
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 175823 bases
Position: chr12:21940146-22115968
Accession: 102135809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000015029	R3H	PF01424.22	2.7e-11	1	1
ENSMFAP00000015008	R3H	PF01424.22	2.9e-11	1	1
ENSMFAP00000015022	R3H	PF01424.22	3.1e-11	1	1
ENSMFAP00000015002	R3H	PF01424.22	3.2e-11	1	1
ENSMFAP00000015036	R3H	PF01424.22	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000065527	R3HDM1-202	4282	XM_005573031	ENSMFAP00000015008	1015 (aa)	XP_005573088	A0A2K5URG8
ENSMFAT00000065520	R3HDM1-201	4720	XM_005573023	ENSMFAP00000015002	1100 (aa)	XP_005573080	A0A2K5URE8
ENSMFAT00000065555	R3HDM1-205	3303	XM_005573025	ENSMFAP00000015036	1100 (aa)	XP_005573082	A0A2K5URG9
ENSMFAT00000065548	R3HDM1-204	3903	XM_005573028	ENSMFAP00000015029	971 (aa)	XP_005573085	A0A2K5URH5
ENSMFAT00000065615	R3HDM1-206	3937	-	ENSMFAP00000015096	445 (aa)	-	A0A2K5URU9
ENSMFAT00000065541	R3HDM1-203	3135	XM_005573039	ENSMFAP00000015022	1044 (aa)	XP_005573096	A0A2K5URG2

Gene Model

Click here to download ENSMFAG00000030331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000030331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000030331	R3HDM1	62	63.323	ENSMFAG00000041762	ARPP21	82	60.695
ENSMFAG00000030331	R3HDM1	99	50.287	ENSMFAG00000036385	R3HDM2	95	57.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000030331	R3HDM1	100	100.000	ENSG00000048991	R3HDM1	100	99.091	Homo_sapiens
ENSMFAG00000030331	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	90	59.656	Acanthochromis_polyacanthus
ENSMFAG00000030331	R3HDM1	100	97.537	ENSAMEG00000014886	R3HDM1	100	95.104	Ailuropoda_melanoleuca
ENSMFAG00000030331	R3HDM1	88	62.291	ENSAOCG00000005192	r3hdm1	93	59.656	Amphiprion_ocellaris
ENSMFAG00000030331	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSMFAG00000030331	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	64.010	Anabas_testudineus
ENSMFAG00000030331	R3HDM1	100	79.042	ENSAPLG00000015231	R3HDM1	100	79.313	Anas_platyrhynchos
ENSMFAG00000030331	R3HDM1	100	84.236	ENSACAG00000001676	R3HDM1	100	76.903	Anolis_carolinensis
ENSMFAG00000030331	R3HDM1	100	99.015	ENSANAG00000035334	R3HDM1	100	98.365	Aotus_nancymaae
ENSMFAG00000030331	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	89	68.590	Astatotilapia_calliptera
ENSMFAG00000030331	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSMFAG00000030331	R3HDM1	100	72.115	ENSAMXG00000012861	R3HDM1	100	60.843	Astyanax_mexicanus
ENSMFAG00000030331	R3HDM1	60	40.058	ENSAMXG00000020587	arpp21	88	38.109	Astyanax_mexicanus
ENSMFAG00000030331	R3HDM1	100	95.567	ENSBTAG00000013302	R3HDM1	100	91.381	Bos_taurus
ENSMFAG00000030331	R3HDM1	100	99.015	ENSCJAG00000011718	R3HDM1	100	97.909	Callithrix_jacchus
ENSMFAG00000030331	R3HDM1	100	97.783	ENSCAFG00000005075	R3HDM1	100	95.286	Canis_familiaris
ENSMFAG00000030331	R3HDM1	100	97.783	ENSCAFG00020016119	R3HDM1	100	95.739	Canis_lupus_dingo
ENSMFAG00000030331	R3HDM1	100	95.813	ENSCHIG00000020851	R3HDM1	100	94.016	Capra_hircus
ENSMFAG00000030331	R3HDM1	100	93.103	ENSCPOG00000012784	R3HDM1	100	89.631	Cavia_porcellus
ENSMFAG00000030331	R3HDM1	100	98.276	ENSCCAG00000027199	R3HDM1	100	97.818	Cebus_capucinus
ENSMFAG00000030331	R3HDM1	100	99.636	ENSCATG00000023642	R3HDM1	100	99.636	Cercocebus_atys
ENSMFAG00000030331	R3HDM1	100	95.074	ENSCLAG00000007962	R3HDM1	94	95.425	Chinchilla_lanigera
ENSMFAG00000030331	R3HDM1	100	99.754	ENSCSAG00000016356	R3HDM1	100	96.649	Chlorocebus_sabaeus
ENSMFAG00000030331	R3HDM1	86	93.939	ENSCHOG00000013638	R3HDM1	91	94.118	Choloepus_hoffmanni
ENSMFAG00000030331	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSMFAG00000030331	R3HDM1	100	99.261	ENSCANG00000034748	R3HDM1	100	99.092	Colobus_angolensis_palliatus
ENSMFAG00000030331	R3HDM1	99	95.813	ENSCGRG00001012357	R3hdm1	97	88.526	Cricetulus_griseus_chok1gshd
ENSMFAG00000030331	R3HDM1	100	95.813	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSMFAG00000030331	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	91	57.831	Cynoglossus_semilaevis
ENSMFAG00000030331	R3HDM1	88	60.382	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSMFAG00000030331	R3HDM1	64	35.952	ENSDARG00000061081	arpp21	95	35.131	Danio_rerio
ENSMFAG00000030331	R3HDM1	100	91.531	ENSDNOG00000000771	R3HDM1	100	90.901	Dasypus_novemcinctus
ENSMFAG00000030331	R3HDM1	96	91.892	ENSETEG00000013606	R3HDM1	100	83.590	Echinops_telfairi
ENSMFAG00000030331	R3HDM1	63	47.045	ENSEBUG00000014746	arpp21	97	43.701	Eptatretus_burgeri
ENSMFAG00000030331	R3HDM1	100	98.066	ENSEASG00005007392	R3HDM1	100	95.376	Equus_asinus_asinus
ENSMFAG00000030331	R3HDM1	100	97.537	ENSECAG00000019114	R3HDM1	100	95.648	Equus_caballus
ENSMFAG00000030331	R3HDM1	91	87.061	ENSEEUG00000012589	R3HDM1	91	87.061	Erinaceus_europaeus
ENSMFAG00000030331	R3HDM1	92	53.391	ENSELUG00000014413	r3hdm1	96	53.964	Esox_lucius
ENSMFAG00000030331	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.751	Esox_lucius
ENSMFAG00000030331	R3HDM1	100	97.790	ENSFCAG00000027113	R3HDM1	100	94.742	Felis_catus
ENSMFAG00000030331	R3HDM1	75	73.108	ENSFALG00000013731	R3HDM1	93	66.158	Ficedula_albicollis
ENSMFAG00000030331	R3HDM1	100	95.567	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSMFAG00000030331	R3HDM1	88	61.337	ENSFHEG00000018713	r3hdm1	100	47.683	Fundulus_heteroclitus
ENSMFAG00000030331	R3HDM1	61	64.565	ENSGMOG00000006042	-	74	65.217	Gadus_morhua
ENSMFAG00000030331	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSMFAG00000030331	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	89	68.932	Gambusia_affinis
ENSMFAG00000030331	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	94	67.155	Gasterosteus_aculeatus
ENSMFAG00000030331	R3HDM1	100	83.824	ENSGAGG00000007840	R3HDM1	100	78.281	Gopherus_agassizii
ENSMFAG00000030331	R3HDM1	100	100.000	ENSGGOG00000008156	R3HDM1	100	98.909	Gorilla_gorilla
ENSMFAG00000030331	R3HDM1	100	95.320	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSMFAG00000030331	R3HDM1	100	68.994	ENSHGLG00100015374	-	100	73.449	Heterocephalus_glaber_male
ENSMFAG00000030331	R3HDM1	100	95.074	ENSHGLG00100003184	-	94	95.425	Heterocephalus_glaber_male
ENSMFAG00000030331	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	85	67.208	Hippocampus_comes
ENSMFAG00000030331	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	98	58.632	Ictalurus_punctatus
ENSMFAG00000030331	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	100	51.165	Ictalurus_punctatus
ENSMFAG00000030331	R3HDM1	100	96.798	ENSSTOG00000007572	R3HDM1	99	96.863	Ictidomys_tridecemlineatus
ENSMFAG00000030331	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	71.117	Latimeria_chalumnae
ENSMFAG00000030331	R3HDM1	100	75.787	ENSLOCG00000001641	r3hdm1	100	66.370	Lepisosteus_oculatus
ENSMFAG00000030331	R3HDM1	100	96.305	ENSLAFG00000009065	R3HDM1	100	91.109	Loxodonta_africana
ENSMFAG00000030331	R3HDM1	100	100.000	ENSMMUG00000009844	R3HDM1	100	99.904	Macaca_mulatta
ENSMFAG00000030331	R3HDM1	100	100.000	ENSMNEG00000027793	R3HDM1	100	100.000	Macaca_nemestrina
ENSMFAG00000030331	R3HDM1	100	100.000	ENSMLEG00000043189	R3HDM1	100	99.909	Mandrillus_leucophaeus
ENSMFAG00000030331	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	91	61.391	Mastacembelus_armatus
ENSMFAG00000030331	R3HDM1	88	61.337	ENSMZEG00005003157	r3hdm1	95	60.621	Maylandia_zebra
ENSMFAG00000030331	R3HDM1	100	78.591	ENSMGAG00000012461	R3HDM1	100	78.771	Meleagris_gallopavo
ENSMFAG00000030331	R3HDM1	100	96.305	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSMFAG00000030331	R3HDM1	95	92.532	ENSMICG00000042655	-	100	92.532	Microcebus_murinus
ENSMFAG00000030331	R3HDM1	100	96.552	ENSMICG00000005900	-	100	94.208	Microcebus_murinus
ENSMFAG00000030331	R3HDM1	51	84.906	ENSMOCG00000019833	-	100	91.030	Microtus_ochrogaster
ENSMFAG00000030331	R3HDM1	89	87.799	ENSMODG00000000923	R3HDM1	90	86.651	Monodelphis_domestica
ENSMFAG00000030331	R3HDM1	99	60.238	ENSMALG00000009000	r3hdm1	91	60.476	Monopterus_albus
ENSMFAG00000030331	R3HDM1	100	95.074	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSMFAG00000030331	R3HDM1	100	95.074	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSMFAG00000030331	R3HDM1	100	94.828	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSMFAG00000030331	R3HDM1	100	95.074	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSMFAG00000030331	R3HDM1	100	97.783	ENSMPUG00000002412	R3HDM1	100	94.832	Mustela_putorius_furo
ENSMFAG00000030331	R3HDM1	100	96.059	ENSMLUG00000013824	R3HDM1	100	92.857	Myotis_lucifugus
ENSMFAG00000030331	R3HDM1	100	99.507	ENSNLEG00000008622	R3HDM1	100	99.000	Nomascus_leucogenys
ENSMFAG00000030331	R3HDM1	89	72.635	ENSMEUG00000011784	R3HDM1	100	72.838	Notamacropus_eugenii
ENSMFAG00000030331	R3HDM1	100	96.059	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSMFAG00000030331	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	93	66.763	Oreochromis_niloticus
ENSMFAG00000030331	R3HDM1	100	81.515	ENSOANG00000007987	R3HDM1	100	81.785	Ornithorhynchus_anatinus
ENSMFAG00000030331	R3HDM1	88	96.059	ENSOCUG00000017366	R3HDM1	98	93.598	Oryctolagus_cuniculus
ENSMFAG00000030331	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	84	67.742	Oryzias_latipes
ENSMFAG00000030331	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	85	68.065	Oryzias_latipes_hsok
ENSMFAG00000030331	R3HDM1	100	97.044	ENSOGAG00000003136	R3HDM1	100	93.382	Otolemur_garnettii
ENSMFAG00000030331	R3HDM1	100	95.813	ENSOARG00000010788	R3HDM1	100	93.835	Ovis_aries
ENSMFAG00000030331	R3HDM1	100	100.000	ENSPPAG00000027858	R3HDM1	100	98.911	Pan_paniscus
ENSMFAG00000030331	R3HDM1	100	97.291	ENSPPRG00000002626	R3HDM1	100	94.470	Panthera_pardus
ENSMFAG00000030331	R3HDM1	100	97.537	ENSPTIG00000016581	R3HDM1	100	94.470	Panthera_tigris_altaica
ENSMFAG00000030331	R3HDM1	100	100.000	ENSPTRG00000012494	R3HDM1	100	98.820	Pan_troglodytes
ENSMFAG00000030331	R3HDM1	100	99.909	ENSPANG00000026448	R3HDM1	100	99.909	Papio_anubis
ENSMFAG00000030331	R3HDM1	88	76.433	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSMFAG00000030331	R3HDM1	100	78.662	ENSPSIG00000012915	R3HDM1	100	79.024	Pelodiscus_sinensis
ENSMFAG00000030331	R3HDM1	100	95.320	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSMFAG00000030331	R3HDM1	91	52.696	ENSPMAG00000003369	-	99	42.912	Petromyzon_marinus
ENSMFAG00000030331	R3HDM1	100	90.659	ENSPCIG00000002491	R3HDM1	100	84.054	Phascolarctos_cinereus
ENSMFAG00000030331	R3HDM1	88	59.620	ENSPFOG00000015036	r3hdm1	94	58.670	Poecilia_formosa
ENSMFAG00000030331	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	86	66.044	Poecilia_latipinna
ENSMFAG00000030331	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	86	66.044	Poecilia_mexicana
ENSMFAG00000030331	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	88	68.608	Poecilia_reticulata
ENSMFAG00000030331	R3HDM1	100	97.729	ENSPPYG00000012815	R3HDM1	100	97.729	Pongo_abelii
ENSMFAG00000030331	R3HDM1	93	92.705	ENSPCAG00000006208	R3HDM1	94	92.121	Procavia_capensis
ENSMFAG00000030331	R3HDM1	100	93.974	ENSPCOG00000012698	R3HDM1	100	93.974	Propithecus_coquereli
ENSMFAG00000030331	R3HDM1	100	90.640	ENSPVAG00000006098	R3HDM1	100	85.688	Pteropus_vampyrus
ENSMFAG00000030331	R3HDM1	67	38.441	ENSPNAG00000004162	arpp21	85	39.567	Pygocentrus_nattereri
ENSMFAG00000030331	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	58.020	Pygocentrus_nattereri
ENSMFAG00000030331	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSMFAG00000030331	R3HDM1	100	94.581	ENSRNOG00000004099	R3hdm1	100	86.620	Rattus_norvegicus
ENSMFAG00000030331	R3HDM1	100	98.695	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSMFAG00000030331	R3HDM1	100	99.507	ENSRROG00000034534	R3HDM1	100	99.183	Rhinopithecus_roxellana
ENSMFAG00000030331	R3HDM1	100	98.522	ENSSBOG00000020389	R3HDM1	100	97.727	Saimiri_boliviensis_boliviensis
ENSMFAG00000030331	R3HDM1	100	84.072	ENSSHAG00000016999	R3HDM1	100	84.253	Sarcophilus_harrisii
ENSMFAG00000030331	R3HDM1	100	56.661	ENSSFOG00015019851	-	100	56.394	Scleropages_formosus
ENSMFAG00000030331	R3HDM1	89	78.193	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSMFAG00000030331	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.521	Scophthalmus_maximus
ENSMFAG00000030331	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	85	69.231	Seriola_dumerili
ENSMFAG00000030331	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	61.337	Seriola_lalandi_dorsalis
ENSMFAG00000030331	R3HDM1	75	82.724	ENSSARG00000000352	-	69	82.724	Sorex_araneus
ENSMFAG00000030331	R3HDM1	100	80.217	ENSSPUG00000004167	R3HDM1	100	80.307	Sphenodon_punctatus
ENSMFAG00000030331	R3HDM1	88	62.530	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSMFAG00000030331	R3HDM1	100	97.238	ENSSSCG00000015692	R3HDM1	100	95.014	Sus_scrofa
ENSMFAG00000030331	R3HDM1	100	73.803	ENSTGUG00000011750	R3HDM1	92	83.292	Taeniopygia_guttata
ENSMFAG00000030331	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	84	67.532	Takifugu_rubripes
ENSMFAG00000030331	R3HDM1	87	46.069	ENSTNIG00000010362	r3hdm1	99	45.473	Tetraodon_nigroviridis
ENSMFAG00000030331	R3HDM1	100	90.394	ENSTTRG00000003935	R3HDM1	100	88.033	Tursiops_truncatus
ENSMFAG00000030331	R3HDM1	70	96.392	ENSUAMG00000024806	R3HDM1	93	96.392	Ursus_americanus
ENSMFAG00000030331	R3HDM1	100	94.045	ENSUMAG00000005552	R3HDM1	100	94.148	Ursus_maritimus
ENSMFAG00000030331	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSMFAG00000030331	R3HDM1	100	97.790	ENSVVUG00000006457	R3HDM1	100	91.982	Vulpes_vulpes
ENSMFAG00000030331	R3HDM1	90	67.674	ENSXETG00000019330	r3hdm1	100	67.472	Xenopus_tropicalis
ENSMFAG00000030331	R3HDM1	71	50.064	ENSXCOG00000017448	r3hdm1	94	50.323	Xiphophorus_couchianus
ENSMFAG00000030331	R3HDM1	88	61.337	ENSXMAG00000007885	r3hdm1	82	68.285	Xiphophorus_maculatus