EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMFAG00000031523 (Gene tree)
Gene ID
102130507
Gene Symbol
SMN1
Alias
QtsA-10002|SMN
Full Name
survival of motor neuron 1%2C telomeric
Gene Type
protein_coding
Species
Macaca_fascicularis
Status
putative
Strand
Minus strand
Length
62217 bases
Position
chr6:69531601-69593817
Accession
102130507
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMFAP00000017006SMNPF06003.121.9e-10511
ENSMFAP00000017005SMNPF06003.122.4e-10411
ENSMFAP00000017012SMNPF06003.126.8e-10411
ENSMFAP00000017004SMNPF06003.121.9e-10111
ENSMFAP00000017021SMNPF06003.121.9e-10111
ENSMFAP00000017035SMNPF06003.125.9e-10011
ENSMFAP00000017008SMNPF06003.121.8e-9212
ENSMFAP00000017008SMNPF06003.121.8e-9222
ENSMFAP00000017017SMNPF06003.121.9e-8511
ENSMFAP00000017010SMNPF06003.125.2e-5712
ENSMFAP00000017010SMNPF06003.125.2e-5722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMFAT00000067549-684-ENSMFAP00000017010227 (aa)-A0A2K5UX35
ENSMFAT00000067547-789-ENSMFAP00000017008262 (aa)-A0A2K5UX18
ENSMFAT00000067544-913-ENSMFAP00000017005276 (aa)-A0A2K5UX21
ENSMFAT00000067545-885-ENSMFAP00000017006294 (aa)-Q4R4F8
ENSMFAT00000067551-963-ENSMFAP00000017012320 (aa)-A0A2K5UX15
ENSMFAT00000067543-849-ENSMFAP00000017004282 (aa)-A0A2K5UX29
ENSMFAT00000067561-885-ENSMFAP00000017021294 (aa)-A0A2K5UX34
ENSMFAT00000067575-876-ENSMFAP00000017035291 (aa)-A0A2K5UXB8
ENSMFAT00000067557-891-ENSMFAP00000017017296 (aa)-A0A2K5UX19
Gene Model
Click here to download ENSMFAG00000031523's gene model file
Pathways
Pathway IDPathway NameSource
mcf03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000031523's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMFAG00000031523SMN110095.604ENSMFAG00000008812-10093.878
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMFAG00000031523SMN110097.802ENSG00000205571SMN298100.000Homo_sapiens
ENSMFAG00000031523SMN110097.802ENSG00000172062SMN110097.802Homo_sapiens
ENSMFAG00000031523SMN19551.119ENSAPOG00000011324smn19453.237Acanthochromis_polyacanthus
ENSMFAG00000031523SMN19490.000ENSAMEG00000003316-9388.968Ailuropoda_melanoleuca
ENSMFAG00000031523SMN19152.060ENSACIG00000019772-9751.154Amphilophus_citrinellus
ENSMFAG00000031523SMN19551.119ENSAOCG00000024444smn19453.237Amphiprion_ocellaris
ENSMFAG00000031523SMN19551.493ENSAPEG00000016504smn19453.597Amphiprion_percula
ENSMFAG00000031523SMN19254.613ENSATEG00000002182smn17955.303Anabas_testudineus
ENSMFAG00000031523SMN17255.500ENSAPLG00000010912-9754.500Anas_platyrhynchos
ENSMFAG00000031523SMN18181.633ENSACAG00000010017-9557.651Anolis_carolinensis
ENSMFAG00000031523SMN110091.554ENSANAG00000032133-10091.554Aotus_nancymaae
ENSMFAG00000031523SMN19553.137ENSACLG00000007308smn18855.985Astatotilapia_calliptera
ENSMFAG00000031523SMN15457.746ENSAMXG00000013884smn19748.375Astyanax_mexicanus
ENSMFAG00000031523SMN19684.528ENSBTAG00000005743SMN29784.342Bos_taurus
ENSMFAG00000031523SMN18533.188WBGene00004887smn-19432.432Caenorhabditis_elegans
ENSMFAG00000031523SMN110097.802ENSCJAG00000016290-10097.802Callithrix_jacchus
ENSMFAG00000031523SMN19687.266ENSCAFG00000007812SMN9787.900Canis_familiaris
ENSMFAG00000031523SMN19687.266ENSCAFG00020019229-9087.900Canis_lupus_dingo
ENSMFAG00000031523SMN19685.075ENSCHIG00000015559-9585.106Capra_hircus
ENSMFAG00000031523SMN19990.110ENSTSYG00000012058-9695.000Carlito_syrichta
ENSMFAG00000031523SMN18069.298ENSCAPG00000011021-10069.737Cavia_aperea
ENSMFAG00000031523SMN19983.516ENSCPOG00000036973-9982.594Cavia_porcellus
ENSMFAG00000031523SMN110081.250ENSCPOG00000012328-9682.578Cavia_porcellus
ENSMFAG00000031523SMN110096.703ENSCCAG00000018127-10096.703Cebus_capucinus
ENSMFAG00000031523SMN110098.901ENSCATG00000037002-10098.901Cercocebus_atys
ENSMFAG00000031523SMN19981.509ENSCLAG00000000284-9981.509Chinchilla_lanigera
ENSMFAG00000031523SMN110099.320ENSCSAG00000015688-10099.320Chlorocebus_sabaeus
ENSMFAG00000031523SMN18185.938ENSCHOG00000007346-10074.603Choloepus_hoffmanni
ENSMFAG00000031523SMN19861.538ENSCPBG00000010968-9961.852Chrysemys_picta_bellii
ENSMFAG00000031523SMN19992.115ENSCANG00000033324-10086.641Colobus_angolensis_palliatus
ENSMFAG00000031523SMN110099.237ENSCANG00000038242-10099.237Colobus_angolensis_palliatus
ENSMFAG00000031523SMN19965.068ENSCGRG00001016998-9665.480Cricetulus_griseus_chok1gshd
ENSMFAG00000031523SMN19985.714ENSCGRG00001017959-9784.698Cricetulus_griseus_chok1gshd
ENSMFAG00000031523SMN19985.714ENSCGRG00000007698Smn19784.698Cricetulus_griseus_crigri
ENSMFAG00000031523SMN18264.286ENSCSEG00000015227smn19750.534Cynoglossus_semilaevis
ENSMFAG00000031523SMN19551.504ENSCVAG00000007498smn19452.381Cyprinodon_variegatus
ENSMFAG00000031523SMN19652.941ENSDARG00000018494smn19654.380Danio_rerio
ENSMFAG00000031523SMN17774.627ENSDNOG00000045949-8674.020Dasypus_novemcinctus
ENSMFAG00000031523SMN18784.232ENSDNOG00000007283-9984.232Dasypus_novemcinctus
ENSMFAG00000031523SMN19985.106ENSDORG00000007082Smn19980.756Dipodomys_ordii
ENSMFAG00000031523SMN18070.476ENSETEG00000001406-8970.652Echinops_telfairi
ENSMFAG00000031523SMN19639.456ENSEBUG00000011902smn19239.630Eptatretus_burgeri
ENSMFAG00000031523SMN19977.739ENSEASG00005018000-9281.923Equus_asinus_asinus
ENSMFAG00000031523SMN19588.929ENSECAG00000015215-9688.929Equus_caballus
ENSMFAG00000031523SMN19181.746ENSEEUG00000015777-10081.746Erinaceus_europaeus
ENSMFAG00000031523SMN19554.613ENSELUG00000018067smn19453.818Esox_lucius
ENSMFAG00000031523SMN19988.699ENSFCAG00000028292SMN9790.036Felis_catus
ENSMFAG00000031523SMN19658.824ENSFALG00000012320-9557.664Ficedula_albicollis
ENSMFAG00000031523SMN19979.798ENSFDAG00000017683-9980.808Fukomys_damarensis
ENSMFAG00000031523SMN16857.303ENSFHEG00000018508smn19651.292Fundulus_heteroclitus
ENSMFAG00000031523SMN19749.451ENSGMOG00000017279smn19350.000Gadus_morhua
ENSMFAG00000031523SMN19557.736ENSGALG00000002430SMN9557.721Gallus_gallus
ENSMFAG00000031523SMN19551.894ENSGAFG00000009501smn19356.432Gambusia_affinis
ENSMFAG00000031523SMN19552.874ENSGACG00000010584smn19153.077Gasterosteus_aculeatus
ENSMFAG00000031523SMN19663.636ENSGAGG00000011374-9761.566Gopherus_agassizii
ENSMFAG00000031523SMN19139.823ENSGAGG00000013639-9038.624Gopherus_agassizii
ENSMFAG00000031523SMN19797.802ENSGGOG00000003872-10097.561Gorilla_gorilla
ENSMFAG00000031523SMN110083.588ENSGGOG00000026704-9996.667Gorilla_gorilla
ENSMFAG00000031523SMN19553.992ENSHBUG00000013987smn19455.805Haplochromis_burtoni
ENSMFAG00000031523SMN19979.452ENSHGLG00000001905-9979.452Heterocephalus_glaber_female
ENSMFAG00000031523SMN19979.798ENSHGLG00000001018-9681.119Heterocephalus_glaber_female
ENSMFAG00000031523SMN19979.798ENSHGLG00100011252-9681.119Heterocephalus_glaber_male
ENSMFAG00000031523SMN19978.853ENSHGLG00100018676-10079.078Heterocephalus_glaber_male
ENSMFAG00000031523SMN18582.609ENSHCOG00000017136smn18751.331Hippocampus_comes
ENSMFAG00000031523SMN19550.575ENSIPUG00000012580smn18350.725Ictalurus_punctatus
ENSMFAG00000031523SMN19987.814ENSSTOG00000012288-10087.814Ictidomys_tridecemlineatus
ENSMFAG00000031523SMN16661.494ENSJJAG00000014853-8965.143Jaculus_jaculus
ENSMFAG00000031523SMN19553.818ENSKMAG00000007239smn19653.435Kryptolebias_marmoratus
ENSMFAG00000031523SMN19553.091ENSLBEG00000022550smn19453.957Labrus_bergylta
ENSMFAG00000031523SMN19238.662ENSLACG00000009808-9040.072Latimeria_chalumnae
ENSMFAG00000031523SMN19552.471ENSLOCG00000011339smn19356.379Lepisosteus_oculatus
ENSMFAG00000031523SMN19987.912ENSLAFG00000003425-10081.690Loxodonta_africana
ENSMFAG00000031523SMN1100100.000ENSMMUG00000020214SMN1100100.000Macaca_mulatta
ENSMFAG00000031523SMN110093.407ENSMMUG00000030594-10093.197Macaca_mulatta
ENSMFAG00000031523SMN1100100.000ENSMNEG00000035094-100100.000Macaca_nemestrina
ENSMFAG00000031523SMN18185.202ENSMNEG00000036423-8785.202Macaca_nemestrina
ENSMFAG00000031523SMN110099.618ENSMLEG00000041902-10099.618Mandrillus_leucophaeus
ENSMFAG00000031523SMN19551.685ENSMAMG00000011034smn19452.174Mastacembelus_armatus
ENSMFAG00000031523SMN19551.711ENSMZEG00005013634smn19455.805Maylandia_zebra
ENSMFAG00000031523SMN17255.779ENSMGAG00000008889-9553.769Meleagris_gallopavo
ENSMFAG00000031523SMN19983.516ENSMAUG00000010262Smn19683.871Mesocricetus_auratus
ENSMFAG00000031523SMN19989.011ENSMICG00000034708-9989.011Microcebus_murinus
ENSMFAG00000031523SMN19983.154ENSMOCG00000017833Smn19783.688Microtus_ochrogaster
ENSMFAG00000031523SMN19350.763ENSMMOG00000005504smn19452.045Mola_mola
ENSMFAG00000031523SMN18583.333ENSMODG00000001436-9569.366Monodelphis_domestica
ENSMFAG00000031523SMN19549.084ENSMALG00000008025smn19451.095Monopterus_albus
ENSMFAG00000031523SMN19984.615MGP_CAROLIEiJ_G0018836Smn19685.000Mus_caroli
ENSMFAG00000031523SMN19983.871ENSMUSG00000021645Smn19685.000Mus_musculus
ENSMFAG00000031523SMN19982.418MGP_PahariEiJ_G0015911Smn19681.429Mus_pahari
ENSMFAG00000031523SMN19983.516MGP_SPRETEiJ_G0019718Smn19684.286Mus_spretus
ENSMFAG00000031523SMN19988.929ENSMPUG00000014470-9589.963Mustela_putorius_furo
ENSMFAG00000031523SMN19490.000ENSMLUG00000010603-9288.502Myotis_lucifugus
ENSMFAG00000031523SMN19984.946ENSNGAG00000019833Smn19785.765Nannospalax_galili
ENSMFAG00000031523SMN19552.920ENSNBRG00000023000smn19455.556Neolamprologus_brichardi
ENSMFAG00000031523SMN110097.357ENSNLEG00000004454-10097.357Nomascus_leucogenys
ENSMFAG00000031523SMN18263.596ENSMEUG00000011393-9965.066Notamacropus_eugenii
ENSMFAG00000031523SMN19182.213ENSOPRG00000002015-10083.004Ochotona_princeps
ENSMFAG00000031523SMN19981.690ENSODEG00000015976-9781.690Octodon_degus
ENSMFAG00000031523SMN19554.745ENSONIG00000011799smn19554.779Oreochromis_niloticus
ENSMFAG00000031523SMN17890.698ENSOANG00000001626-9564.835Ornithorhynchus_anatinus
ENSMFAG00000031523SMN19488.406ENSOCUG00000026649-9783.045Oryctolagus_cuniculus
ENSMFAG00000031523SMN19984.247ENSOCUG00000017097-9984.247Oryctolagus_cuniculus
ENSMFAG00000031523SMN19980.000ENSOCUG00000025183-9087.705Oryctolagus_cuniculus
ENSMFAG00000031523SMN19552.273ENSORLG00000010552smn19453.137Oryzias_latipes
ENSMFAG00000031523SMN19551.341ENSORLG00020007936smn19355.285Oryzias_latipes_hni
ENSMFAG00000031523SMN19548.889ENSORLG00015022425smn19452.747Oryzias_latipes_hsok
ENSMFAG00000031523SMN19551.301ENSOMEG00000007824smn19453.455Oryzias_melastigma
ENSMFAG00000031523SMN19581.181ENSOGAG00000031414-9481.181Otolemur_garnettii
ENSMFAG00000031523SMN19684.270ENSOARG00000005425-9982.847Ovis_aries
ENSMFAG00000031523SMN110097.802ENSPPAG00000036640-10097.802Pan_paniscus
ENSMFAG00000031523SMN19989.041ENSPPRG00000005575-9790.391Panthera_pardus
ENSMFAG00000031523SMN19989.384ENSPTIG00000007745-9790.747Panthera_tigris_altaica
ENSMFAG00000031523SMN110097.802ENSPTRG00000016955-10097.802Pan_troglodytes
ENSMFAG00000031523SMN110094.505ENSPANG00000000253-9893.056Papio_anubis
ENSMFAG00000031523SMN110099.660ENSPANG00000013601-10099.660Papio_anubis
ENSMFAG00000031523SMN17691.892ENSPKIG00000011096smn19354.772Paramormyrops_kingsleyae
ENSMFAG00000031523SMN19661.255ENSPSIG00000014787-9059.041Pelodiscus_sinensis
ENSMFAG00000031523SMN19548.352ENSPMGG00000012285smn19551.311Periophthalmus_magnuspinnatus
ENSMFAG00000031523SMN19540.892ENSPMAG00000005004smn19141.155Petromyzon_marinus
ENSMFAG00000031523SMN19571.084ENSPCIG00000025764-9771.127Phascolarctos_cinereus
ENSMFAG00000031523SMN19551.894ENSPFOG00000007786smn19453.309Poecilia_formosa
ENSMFAG00000031523SMN19057.851ENSPLAG00000012071smn19358.091Poecilia_latipinna
ENSMFAG00000031523SMN19057.438ENSPMEG00000017085smn19357.676Poecilia_mexicana
ENSMFAG00000031523SMN19553.030ENSPREG00000005824smn19358.091Poecilia_reticulata
ENSMFAG00000031523SMN19997.091ENSPPYG00000015533-9997.091Pongo_abelii
ENSMFAG00000031523SMN19158.800ENSPPYG00000019189-9965.596Pongo_abelii
ENSMFAG00000031523SMN19681.481ENSPCAG00000004187-9981.852Procavia_capensis
ENSMFAG00000031523SMN18594.915ENSPCOG00000022307-9977.632Propithecus_coquereli
ENSMFAG00000031523SMN19989.384ENSPVAG00000005977-9989.384Pteropus_vampyrus
ENSMFAG00000031523SMN19552.920ENSPNYG00000014148smn19455.556Pundamilia_nyererei
ENSMFAG00000031523SMN19550.382ENSPNAG00000014007smn18846.128Pygocentrus_nattereri
ENSMFAG00000031523SMN19983.516ENSRNOG00000018067Smn19683.630Rattus_norvegicus
ENSMFAG00000031523SMN110099.237ENSRBIG00000037052-10099.237Rhinopithecus_bieti
ENSMFAG00000031523SMN19392.308ENSRBIG00000036775-9583.214Rhinopithecus_bieti
ENSMFAG00000031523SMN110099.237ENSRROG00000039399-10099.237Rhinopithecus_roxellana
ENSMFAG00000031523SMN110083.212ENSRROG00000031088-10080.339Rhinopithecus_roxellana
ENSMFAG00000031523SMN18983.658ENSSBOG00000020112-9481.784Saimiri_boliviensis_boliviensis
ENSMFAG00000031523SMN110096.703ENSSBOG00000011665-10096.703Saimiri_boliviensis_boliviensis
ENSMFAG00000031523SMN19968.601ENSSHAG00000001499-9770.480Sarcophilus_harrisii
ENSMFAG00000031523SMN19550.000ENSSFOG00015015507smn19454.472Scleropages_formosus
ENSMFAG00000031523SMN19550.187ENSSMAG00000007922smn19452.518Scophthalmus_maximus
ENSMFAG00000031523SMN19551.087ENSSDUG00000018533smn19453.047Seriola_dumerili
ENSMFAG00000031523SMN19551.449ENSSLDG00000021135smn19453.405Seriola_lalandi_dorsalis
ENSMFAG00000031523SMN18971.622ENSSPUG00000000373-9363.333Sphenodon_punctatus
ENSMFAG00000031523SMN19551.292ENSSPAG00000004345smn19454.545Stegastes_partitus
ENSMFAG00000031523SMN19989.041ENSSSCG00000016970-9989.041Sus_scrofa
ENSMFAG00000031523SMN17758.685ENSSSCG00000033865-9462.617Sus_scrofa
ENSMFAG00000031523SMN19766.142ENSSSCG00000029127-9666.532Sus_scrofa
ENSMFAG00000031523SMN19859.075ENSTGUG00000001548-9660.902Taeniopygia_guttata
ENSMFAG00000031523SMN19148.881ENSTRUG00000000736smn9549.627Takifugu_rubripes
ENSMFAG00000031523SMN19348.897ENSTNIG00000009892smn19548.387Tetraodon_nigroviridis
ENSMFAG00000031523SMN17088.043ENSTBEG00000002399-8988.043Tupaia_belangeri
ENSMFAG00000031523SMN19487.500ENSTTRG00000005080-9585.053Tursiops_truncatus
ENSMFAG00000031523SMN17089.130ENSUAMG00000024947-6789.130Ursus_americanus
ENSMFAG00000031523SMN19491.250ENSUMAG00000007842-7289.680Ursus_maritimus
ENSMFAG00000031523SMN18890.000ENSVPAG00000009887-9676.030Vicugna_pacos
ENSMFAG00000031523SMN19687.266ENSVVUG00000006934-9787.900Vulpes_vulpes
ENSMFAG00000031523SMN19067.901ENSXETG00000018189smn29552.414Xenopus_tropicalis
ENSMFAG00000031523SMN19636.620ENSXETG00000004912-7960.317Xenopus_tropicalis
ENSMFAG00000031523SMN19156.557ENSXMAG00000001521smn19456.790Xiphophorus_maculatus

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