EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000031629 (Gene tree)
Gene ID: 107126393
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 102122 bases
Position: chr8:95505697-95607818
Accession: 101864892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000016942	ResIII	PF04851.15	9.5e-12	1	1
ENSMFAP00000016938	ResIII	PF04851.15	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000067476	-	3070	XM_005563711	ENSMFAP00000016938	908 (aa)	XP_005563768	A0A2K5UWW2
ENSMFAT00000067503	-	7262	XM_005563713	ENSMFAP00000016965	299 (aa)	XP_005563770	A0A2K5UWX3
ENSMFAT00000067508	-	5365	XM_005563714	ENSMFAP00000016970	117 (aa)	XP_005563771	A0A2K5UWX7
ENSMFAT00000067480	-	3087	XM_005563712	ENSMFAP00000016942	724 (aa)	XP_005563769	A0A2K5UX23

Gene Model

Click here to download ENSMFAG00000031629's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000031629's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000031629	-	71	30.784	ENSMFAG00000043562	CHD1L	54	30.784
ENSMFAG00000031629	-	67	33.143	ENSMFAG00000042606	SMARCAD1	56	33.143
ENSMFAG00000031629	-	59	39.216	ENSMFAG00000044053	HELLS	60	39.216
ENSMFAG00000031629	-	89	43.590	ENSMFAG00000031241	RAD54L	84	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000031629	-	100	98.209	ENSG00000197275	RAD54B	100	97.473	Homo_sapiens
ENSMFAG00000031629	-	100	98.209	ENSG00000265817	FSBP	100	98.209	Homo_sapiens
ENSMFAG00000031629	-	99	89.793	ENSAMEG00000005834	-	99	86.703	Ailuropoda_melanoleuca
ENSMFAG00000031629	-	99	58.573	ENSACIG00000013005	rad54b	99	54.536	Amphilophus_citrinellus
ENSMFAG00000031629	-	99	59.209	ENSAOCG00000008523	rad54b	99	54.352	Amphiprion_ocellaris
ENSMFAG00000031629	-	99	58.207	ENSAPEG00000001673	rad54b	99	54.945	Amphiprion_percula
ENSMFAG00000031629	-	99	58.003	ENSATEG00000001527	rad54b	99	54.208	Anabas_testudineus
ENSMFAG00000031629	-	99	75.242	ENSAPLG00000014366	-	99	69.651	Anas_platyrhynchos
ENSMFAG00000031629	-	100	70.564	ENSACAG00000003671	-	99	70.980	Anolis_carolinensis
ENSMFAG00000031629	-	89	94.290	ENSANAG00000019528	-	100	94.290	Aotus_nancymaae
ENSMFAG00000031629	-	99	58.711	ENSACLG00000007826	rad54b	99	54.655	Astatotilapia_calliptera
ENSMFAG00000031629	-	99	57.735	ENSAMXG00000039985	rad54b	94	58.008	Astyanax_mexicanus
ENSMFAG00000031629	-	99	88.122	ENSBTAG00000000632	RAD54B	99	85.132	Bos_taurus
ENSMFAG00000031629	-	76	40.145	WBGene00013792	Y116A8C.13	84	35.829	Caenorhabditis_elegans
ENSMFAG00000031629	-	100	95.862	ENSCJAG00000000080	-	100	95.862	Callithrix_jacchus
ENSMFAG00000031629	-	99	88.552	ENSCAFG00000009179	RAD54B	99	84.945	Canis_familiaris
ENSMFAG00000031629	-	99	88.414	ENSCAFG00020012084	-	99	84.835	Canis_lupus_dingo
ENSMFAG00000031629	-	99	87.983	ENSCHIG00000008230	-	99	84.802	Capra_hircus
ENSMFAG00000031629	-	99	90.483	ENSTSYG00000013234	-	99	89.329	Carlito_syrichta
ENSMFAG00000031629	-	99	88.122	ENSCPOG00000011643	-	99	84.141	Cavia_porcellus
ENSMFAG00000031629	-	100	95.724	ENSCCAG00000011754	-	100	95.724	Cebus_capucinus
ENSMFAG00000031629	-	100	99.449	ENSCATG00000030661	-	100	99.449	Cercocebus_atys
ENSMFAG00000031629	-	100	88.017	ENSCLAG00000010476	-	100	84.523	Chinchilla_lanigera
ENSMFAG00000031629	-	100	99.171	ENSCSAG00000012712	-	100	98.899	Chlorocebus_sabaeus
ENSMFAG00000031629	-	100	75.549	ENSCPBG00000003204	-	99	70.620	Chrysemys_picta_bellii
ENSMFAG00000031629	-	100	99.033	ENSCANG00000017939	-	100	99.033	Colobus_angolensis_palliatus
ENSMFAG00000031629	-	99	84.232	ENSCGRG00001020184	Rad54b	99	79.736	Cricetulus_griseus_chok1gshd
ENSMFAG00000031629	-	99	82.849	ENSCGRG00000016752	Rad54b	99	78.414	Cricetulus_griseus_crigri
ENSMFAG00000031629	-	99	57.418	ENSCSEG00000001601	rad54b	99	61.538	Cynoglossus_semilaevis
ENSMFAG00000031629	-	99	60.274	ENSCVAG00000009200	rad54b	99	56.004	Cyprinodon_variegatus
ENSMFAG00000031629	-	99	57.989	ENSDARG00000092134	rad54b	99	60.555	Danio_rerio
ENSMFAG00000031629	-	99	87.862	ENSDNOG00000015535	-	99	84.430	Dasypus_novemcinctus
ENSMFAG00000031629	-	99	88.398	ENSDORG00000002492	Rad54b	99	84.286	Dipodomys_ordii
ENSMFAG00000031629	-	83	87.417	ENSETEG00000010605	-	100	81.749	Echinops_telfairi
ENSMFAG00000031629	-	100	48.985	ENSEBUG00000009104	rad54b	99	46.452	Eptatretus_burgeri
ENSMFAG00000031629	-	99	87.862	ENSEASG00005004021	-	99	86.183	Equus_asinus_asinus
ENSMFAG00000031629	-	99	88.276	ENSECAG00000021949	-	99	86.813	Equus_caballus
ENSMFAG00000031629	-	88	81.132	ENSEEUG00000008056	-	83	81.132	Erinaceus_europaeus
ENSMFAG00000031629	-	99	58.985	ENSELUG00000009287	rad54b	99	53.846	Esox_lucius
ENSMFAG00000031629	-	99	89.779	ENSFCAG00000015513	-	99	89.779	Felis_catus
ENSMFAG00000031629	-	99	74.689	ENSFALG00000005467	-	99	68.913	Ficedula_albicollis
ENSMFAG00000031629	-	98	88.277	ENSFDAG00000020541	-	100	85.259	Fukomys_damarensis
ENSMFAG00000031629	-	99	57.629	ENSFHEG00000014382	rad54b	87	58.417	Fundulus_heteroclitus
ENSMFAG00000031629	-	99	55.631	ENSGMOG00000014774	rad54b	98	56.156	Gadus_morhua
ENSMFAG00000031629	-	100	73.626	ENSGALG00000043597	RAD54B	99	68.472	Gallus_gallus
ENSMFAG00000031629	-	99	58.527	ENSGAFG00000007901	rad54b	99	54.376	Gambusia_affinis
ENSMFAG00000031629	-	99	58.752	ENSGACG00000009128	rad54b	99	54.908	Gasterosteus_aculeatus
ENSMFAG00000031629	-	100	75.412	ENSGAGG00000018747	-	99	70.511	Gopherus_agassizii
ENSMFAG00000031629	-	99	98.207	ENSGGOG00000023516	-	99	97.250	Gorilla_gorilla
ENSMFAG00000031629	-	99	58.276	ENSHBUG00000016017	rad54b	99	53.426	Haplochromis_burtoni
ENSMFAG00000031629	-	99	86.712	ENSHGLG00000008263	RAD54B	99	83.825	Heterocephalus_glaber_female
ENSMFAG00000031629	-	99	85.598	ENSHGLG00100008108	-	99	83.062	Heterocephalus_glaber_male
ENSMFAG00000031629	-	99	56.889	ENSHCOG00000004764	rad54b	98	55.748	Hippocampus_comes
ENSMFAG00000031629	-	99	58.060	ENSIPUG00000018531	rad54b	99	52.710	Ictalurus_punctatus
ENSMFAG00000031629	-	99	87.917	ENSSTOG00000010791	-	99	84.327	Ictidomys_tridecemlineatus
ENSMFAG00000031629	-	99	86.030	ENSJJAG00000010314	Rad54b	99	81.938	Jaculus_jaculus
ENSMFAG00000031629	-	99	56.593	ENSKMAG00000004744	rad54b	99	52.516	Kryptolebias_marmoratus
ENSMFAG00000031629	-	99	69.945	ENSLACG00000000859	-	100	70.187	Latimeria_chalumnae
ENSMFAG00000031629	-	99	63.912	ENSLOCG00000010100	rad54b	97	62.515	Lepisosteus_oculatus
ENSMFAG00000031629	-	100	88.292	ENSLAFG00000015315	-	100	85.025	Loxodonta_africana
ENSMFAG00000031629	-	100	100.000	ENSMMUG00000005659	-	100	100.000	Macaca_mulatta
ENSMFAG00000031629	-	100	99.724	ENSMNEG00000016408	-	100	99.670	Macaca_nemestrina
ENSMFAG00000031629	-	100	99.586	ENSMLEG00000006946	-	100	99.559	Mandrillus_leucophaeus
ENSMFAG00000031629	-	99	58.288	ENSMAMG00000012269	rad54b	99	54.891	Mastacembelus_armatus
ENSMFAG00000031629	-	99	58.573	ENSMZEG00005005281	rad54b	95	59.039	Maylandia_zebra
ENSMFAG00000031629	-	100	73.489	ENSMGAG00000012024	-	99	68.295	Meleagris_gallopavo
ENSMFAG00000031629	-	99	84.232	ENSMAUG00000013586	Rad54b	99	79.736	Mesocricetus_auratus
ENSMFAG00000031629	-	99	90.621	ENSMICG00000000754	-	99	84.378	Microcebus_murinus
ENSMFAG00000031629	-	99	81.103	ENSMOCG00000020035	Rad54b	99	77.692	Microtus_ochrogaster
ENSMFAG00000031629	-	99	57.514	ENSMMOG00000003394	rad54b	99	53.688	Mola_mola
ENSMFAG00000031629	-	99	79.391	ENSMODG00000007343	-	99	77.250	Monodelphis_domestica
ENSMFAG00000031629	-	89	58.942	ENSMALG00000001520	rad54b	99	58.942	Monopterus_albus
ENSMFAG00000031629	-	99	82.873	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.218	Mus_caroli
ENSMFAG00000031629	-	99	82.573	ENSMUSG00000078773	Rad54b	99	77.863	Mus_musculus
ENSMFAG00000031629	-	99	83.402	MGP_PahariEiJ_G0023933	Rad54b	99	78.414	Mus_pahari
ENSMFAG00000031629	-	99	83.702	MGP_SPRETEiJ_G0026758	Rad54b	99	78.768	Mus_spretus
ENSMFAG00000031629	-	99	88.138	ENSMPUG00000008878	-	99	87.145	Mustela_putorius_furo
ENSMFAG00000031629	-	100	88.567	ENSMLUG00000008953	-	100	84.320	Myotis_lucifugus
ENSMFAG00000031629	-	99	86.831	ENSNGAG00000017537	Rad54b	99	82.823	Nannospalax_galili
ENSMFAG00000031629	-	99	58.654	ENSNBRG00000013394	rad54b	99	53.939	Neolamprologus_brichardi
ENSMFAG00000031629	-	100	97.934	ENSNLEG00000003062	-	99	97.934	Nomascus_leucogenys
ENSMFAG00000031629	-	78	79.503	ENSMEUG00000012426	-	71	75.689	Notamacropus_eugenii
ENSMFAG00000031629	-	93	88.035	ENSODEG00000002650	-	95	86.553	Octodon_degus
ENSMFAG00000031629	-	99	86.860	ENSODEG00000019564	-	99	83.811	Octodon_degus
ENSMFAG00000031629	-	99	58.630	ENSONIG00000006067	rad54b	99	54.713	Oreochromis_niloticus
ENSMFAG00000031629	-	99	77.517	ENSOANG00000011348	-	99	77.364	Ornithorhynchus_anatinus
ENSMFAG00000031629	-	99	90.069	ENSOCUG00000016478	-	99	85.604	Oryctolagus_cuniculus
ENSMFAG00000031629	-	99	59.563	ENSORLG00000008918	rad54b	99	62.229	Oryzias_latipes
ENSMFAG00000031629	-	89	62.384	ENSORLG00020012171	rad54b	99	62.384	Oryzias_latipes_hni
ENSMFAG00000031629	-	99	59.189	ENSORLG00015018536	rad54b	99	54.277	Oryzias_latipes_hsok
ENSMFAG00000031629	-	99	59.122	ENSOMEG00000004345	rad54b	99	59.250	Oryzias_melastigma
ENSMFAG00000031629	-	99	89.241	ENSOGAG00000007854	-	99	86.703	Otolemur_garnettii
ENSMFAG00000031629	-	99	87.707	ENSOARG00000007691	-	99	86.914	Ovis_aries
ENSMFAG00000031629	-	100	96.006	ENSPPAG00000029572	-	100	95.604	Pan_paniscus
ENSMFAG00000031629	-	99	89.917	ENSPPRG00000007571	-	99	89.917	Panthera_pardus
ENSMFAG00000031629	-	99	89.917	ENSPTIG00000012670	-	99	89.917	Panthera_tigris_altaica
ENSMFAG00000031629	-	100	98.209	ENSPTRG00000020427	-	100	98.209	Pan_troglodytes
ENSMFAG00000031629	-	100	99.670	ENSPANG00000019566	-	100	99.670	Papio_anubis
ENSMFAG00000031629	-	99	62.881	ENSPKIG00000014974	rad54b	99	58.370	Paramormyrops_kingsleyae
ENSMFAG00000031629	-	100	73.489	ENSPSIG00000002383	-	99	72.917	Pelodiscus_sinensis
ENSMFAG00000031629	-	99	83.840	ENSPEMG00000012133	Rad54b	99	79.978	Peromyscus_maniculatus_bairdii
ENSMFAG00000031629	-	100	57.531	ENSPMAG00000002916	rad54b	99	58.177	Petromyzon_marinus
ENSMFAG00000031629	-	100	80.028	ENSPCIG00000020151	-	94	77.805	Phascolarctos_cinereus
ENSMFAG00000031629	-	99	60.027	ENSPFOG00000023411	rad54b	99	55.059	Poecilia_formosa
ENSMFAG00000031629	-	99	60.027	ENSPLAG00000010430	rad54b	99	55.272	Poecilia_latipinna
ENSMFAG00000031629	-	99	60.027	ENSPMEG00000016873	rad54b	95	59.236	Poecilia_mexicana
ENSMFAG00000031629	-	99	59.781	ENSPREG00000018443	rad54b	99	55.109	Poecilia_reticulata
ENSMFAG00000031629	-	100	97.796	ENSPPYG00000018750	-	100	97.253	Pongo_abelii
ENSMFAG00000031629	-	99	91.034	ENSPCOG00000026845	-	99	91.034	Propithecus_coquereli
ENSMFAG00000031629	-	99	89.517	ENSPVAG00000000261	-	92	89.474	Pteropus_vampyrus
ENSMFAG00000031629	-	99	58.264	ENSPNYG00000018303	rad54b	96	58.756	Pundamilia_nyererei
ENSMFAG00000031629	-	100	58.117	ENSPNAG00000000295	rad54b	99	54.360	Pygocentrus_nattereri
ENSMFAG00000031629	-	99	80.939	ENSRNOG00000039949	Rad54b	99	76.101	Rattus_norvegicus
ENSMFAG00000031629	-	100	98.343	ENSRBIG00000020419	-	100	98.128	Rhinopithecus_bieti
ENSMFAG00000031629	-	100	98.343	ENSRROG00000039897	-	100	98.128	Rhinopithecus_roxellana
ENSMFAG00000031629	-	77	43.069	YBR073W	RDH54	82	37.209	Saccharomyces_cerevisiae
ENSMFAG00000031629	-	100	95.448	ENSSBOG00000028501	-	100	94.176	Saimiri_boliviensis_boliviensis
ENSMFAG00000031629	-	99	80.498	ENSSHAG00000017038	-	99	74.753	Sarcophilus_harrisii
ENSMFAG00000031629	-	79	65.202	ENSSFOG00015008483	rad54b	88	65.202	Scleropages_formosus
ENSMFAG00000031629	-	99	57.729	ENSSMAG00000018659	rad54b	99	53.432	Scophthalmus_maximus
ENSMFAG00000031629	-	98	58.815	ENSSDUG00000001122	rad54b	98	53.862	Seriola_dumerili
ENSMFAG00000031629	-	99	58.904	ENSSLDG00000013787	rad54b	99	53.725	Seriola_lalandi_dorsalis
ENSMFAG00000031629	-	100	73.626	ENSSPUG00000016497	-	99	68.490	Sphenodon_punctatus
ENSMFAG00000031629	-	99	59.016	ENSSPAG00000012800	rad54b	99	55.677	Stegastes_partitus
ENSMFAG00000031629	-	100	88.000	ENSSSCG00000006101	-	99	88.110	Sus_scrofa
ENSMFAG00000031629	-	99	74.069	ENSTGUG00000011880	-	99	68.290	Taeniopygia_guttata
ENSMFAG00000031629	-	99	58.767	ENSTRUG00000010015	rad54b	99	52.935	Takifugu_rubripes
ENSMFAG00000031629	-	99	84.232	ENSTTRG00000006312	-	99	83.370	Tursiops_truncatus
ENSMFAG00000031629	-	99	89.931	ENSUMAG00000016401	-	99	86.703	Ursus_maritimus
ENSMFAG00000031629	-	99	88.520	ENSVPAG00000003157	-	99	84.344	Vicugna_pacos
ENSMFAG00000031629	-	99	58.459	ENSXETG00000025924	rad54b	99	59.375	Xenopus_tropicalis
ENSMFAG00000031629	-	99	58.630	ENSXMAG00000013141	rad54b	99	54.705	Xiphophorus_maculatus