EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000031653 (Gene tree)
Gene ID: 102118374
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 92702 bases
Position: chr1:41427966-41520667
Accession: 102118374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000017048	EST1	PF10374.9	1e-24	1	1
ENSMFAP00000017040	EST1	PF10374.9	1.2e-24	1	1
ENSMFAP00000017095	EST1	PF10374.9	1.2e-24	1	1
ENSMFAP00000017044	EST1	PF10374.9	1.2e-24	1	1
ENSMFAP00000017107	EST1	PF10374.9	3e-22	1	1
ENSMFAP00000017048	EST1_DNA_bind	PF10373.9	1.3e-55	1	1
ENSMFAP00000017040	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSMFAP00000017095	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSMFAP00000017044	EST1_DNA_bind	PF10373.9	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000067647	SMG7-206	555	-	ENSMFAP00000017107	184 (aa)	-	A0A2K5UXC0
ENSMFAT00000067588	SMG7-203	6578	XM_005540200	ENSMFAP00000017048	1120 (aa)	XP_005540257	A0A2K5UX49
ENSMFAT00000067584	SMG7-202	6728	XM_005540194	ENSMFAP00000017044	1170 (aa)	XP_005540251	A0A2K5UX48
ENSMFAT00000067635	SMG7-205	8096	XM_005540199	ENSMFAP00000017095	1145 (aa)	XP_005540256	G7NXG4
ENSMFAT00000067580	SMG7-201	6430	XM_005540202	ENSMFAP00000017040	1141 (aa)	XP_005540259	A0A2K5UXC6
ENSMFAT00000067597	SMG7-204	219	-	ENSMFAP00000017057	73 (aa)	-	A0A2K5UX75

Gene Model

Click here to download ENSMFAG00000031653's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000031653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000031653	SMG7	100	99.402	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSMFAG00000031653	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	71.861	Acanthochromis_polyacanthus
ENSMFAG00000031653	SMG7	100	97.118	ENSAMEG00000002357	SMG7	100	97.118	Ailuropoda_melanoleuca
ENSMFAG00000031653	SMG7	70	94.574	ENSACIG00000015152	smg7	100	63.628	Amphilophus_citrinellus
ENSMFAG00000031653	SMG7	85	92.994	ENSAOCG00000013538	smg7	99	65.679	Amphiprion_ocellaris
ENSMFAG00000031653	SMG7	85	92.994	ENSAPEG00000007851	smg7	99	65.625	Amphiprion_percula
ENSMFAG00000031653	SMG7	86	93.082	ENSATEG00000006931	smg7	99	64.851	Anabas_testudineus
ENSMFAG00000031653	SMG7	100	85.404	ENSAPLG00000015811	SMG7	99	86.055	Anas_platyrhynchos
ENSMFAG00000031653	SMG7	100	87.706	ENSACAG00000014989	SMG7	100	85.129	Anolis_carolinensis
ENSMFAG00000031653	SMG7	100	98.913	ENSANAG00000028114	SMG7	100	98.913	Aotus_nancymaae
ENSMFAG00000031653	SMG7	85	94.231	ENSACLG00000022079	smg7	99	65.264	Astatotilapia_calliptera
ENSMFAG00000031653	SMG7	84	94.194	ENSAMXG00000020809	smg7	99	67.475	Astyanax_mexicanus
ENSMFAG00000031653	SMG7	100	96.496	ENSBTAG00000008003	SMG7	100	96.496	Bos_taurus
ENSMFAG00000031653	SMG7	100	98.428	ENSCJAG00000005135	SMG7	100	98.456	Callithrix_jacchus
ENSMFAG00000031653	SMG7	100	97.350	ENSCAFG00000013276	SMG7	100	97.350	Canis_familiaris
ENSMFAG00000031653	SMG7	99	98.352	ENSCAFG00020015475	SMG7	100	97.350	Canis_lupus_dingo
ENSMFAG00000031653	SMG7	99	96.561	ENSCHIG00000018192	SMG7	99	96.646	Capra_hircus
ENSMFAG00000031653	SMG7	100	97.350	ENSTSYG00000002667	SMG7	100	97.350	Carlito_syrichta
ENSMFAG00000031653	SMG7	99	97.684	ENSCPOG00000008906	SMG7	100	97.684	Cavia_porcellus
ENSMFAG00000031653	SMG7	100	98.913	ENSCCAG00000028596	SMG7	100	98.913	Cebus_capucinus
ENSMFAG00000031653	SMG7	100	100.000	ENSCATG00000011063	SMG7	100	100.000	Cercocebus_atys
ENSMFAG00000031653	SMG7	100	97.350	ENSCLAG00000010751	SMG7	100	97.350	Chinchilla_lanigera
ENSMFAG00000031653	SMG7	100	99.744	ENSCSAG00000012654	SMG7	100	99.744	Chlorocebus_sabaeus
ENSMFAG00000031653	SMG7	92	89.494	ENSCHOG00000010522	SMG7	93	89.876	Choloepus_hoffmanni
ENSMFAG00000031653	SMG7	100	92.167	ENSCPBG00000015724	SMG7	100	88.824	Chrysemys_picta_bellii
ENSMFAG00000031653	SMG7	85	51.829	ENSCING00000006953	-	94	53.746	Ciona_intestinalis
ENSMFAG00000031653	SMG7	100	99.825	ENSCANG00000015680	SMG7	100	99.825	Colobus_angolensis_palliatus
ENSMFAG00000031653	SMG7	100	96.319	ENSCGRG00001013705	Smg7	100	96.398	Cricetulus_griseus_chok1gshd
ENSMFAG00000031653	SMG7	99	96.205	ENSCGRG00000018401	Smg7	100	96.345	Cricetulus_griseus_crigri
ENSMFAG00000031653	SMG7	85	89.172	ENSCSEG00000007392	-	87	90.260	Cynoglossus_semilaevis
ENSMFAG00000031653	SMG7	80	88.000	ENSCVAG00000011842	smg7	99	69.000	Cyprinodon_variegatus
ENSMFAG00000031653	SMG7	84	94.839	ENSDARG00000060767	smg7	99	67.055	Danio_rerio
ENSMFAG00000031653	SMG7	100	96.670	ENSDORG00000007331	Smg7	100	96.693	Dipodomys_ordii
ENSMFAG00000031653	SMG7	97	96.196	ENSETEG00000002654	SMG7	100	96.196	Echinops_telfairi
ENSMFAG00000031653	SMG7	100	98.072	ENSEASG00005006524	SMG7	100	98.072	Equus_asinus_asinus
ENSMFAG00000031653	SMG7	100	98.160	ENSECAG00000004313	SMG7	100	98.160	Equus_caballus
ENSMFAG00000031653	SMG7	97	95.837	ENSEEUG00000002024	SMG7	94	95.837	Erinaceus_europaeus
ENSMFAG00000031653	SMG7	85	94.268	ENSELUG00000010293	smg7	99	66.606	Esox_lucius
ENSMFAG00000031653	SMG7	100	97.634	ENSFCAG00000010900	SMG7	100	97.634	Felis_catus
ENSMFAG00000031653	SMG7	100	86.285	ENSFALG00000003047	SMG7	98	86.198	Ficedula_albicollis
ENSMFAG00000031653	SMG7	99	96.839	ENSFDAG00000012121	SMG7	99	97.237	Fukomys_damarensis
ENSMFAG00000031653	SMG7	85	89.809	ENSFHEG00000011073	smg7	99	62.543	Fundulus_heteroclitus
ENSMFAG00000031653	SMG7	85	90.446	ENSGMOG00000004916	smg7	92	67.591	Gadus_morhua
ENSMFAG00000031653	SMG7	100	85.330	ENSGALG00000004667	SMG7	99	86.004	Gallus_gallus
ENSMFAG00000031653	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	62.921	Gambusia_affinis
ENSMFAG00000031653	SMG7	85	91.720	ENSGACG00000001634	smg7	99	65.240	Gasterosteus_aculeatus
ENSMFAG00000031653	SMG7	97	87.363	ENSGAGG00000024208	-	86	95.062	Gopherus_agassizii
ENSMFAG00000031653	SMG7	100	99.301	ENSGGOG00000002342	SMG7	100	99.301	Gorilla_gorilla
ENSMFAG00000031653	SMG7	86	93.038	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSMFAG00000031653	SMG7	98	97.326	ENSHGLG00000009353	SMG7	100	97.326	Heterocephalus_glaber_female
ENSMFAG00000031653	SMG7	100	89.308	ENSHGLG00100004878	-	100	89.308	Heterocephalus_glaber_male
ENSMFAG00000031653	SMG7	98	95.633	ENSHGLG00100009637	-	100	95.633	Heterocephalus_glaber_male
ENSMFAG00000031653	SMG7	98	76.923	ENSHCOG00000012804	-	89	84.337	Hippocampus_comes
ENSMFAG00000031653	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	67.926	Ictalurus_punctatus
ENSMFAG00000031653	SMG7	100	98.422	ENSSTOG00000000401	SMG7	100	98.433	Ictidomys_tridecemlineatus
ENSMFAG00000031653	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSMFAG00000031653	SMG7	100	95.793	ENSJJAG00000012351	Smg7	100	95.793	Jaculus_jaculus
ENSMFAG00000031653	SMG7	72	93.182	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSMFAG00000031653	SMG7	86	91.195	ENSLBEG00000002983	smg7	99	65.425	Labrus_bergylta
ENSMFAG00000031653	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSMFAG00000031653	SMG7	90	90.361	ENSLACG00000000972	SMG7	99	75.934	Latimeria_chalumnae
ENSMFAG00000031653	SMG7	86	94.340	ENSLOCG00000002010	smg7	99	67.977	Lepisosteus_oculatus
ENSMFAG00000031653	SMG7	99	97.527	ENSLAFG00000008186	SMG7	100	97.476	Loxodonta_africana
ENSMFAG00000031653	SMG7	100	99.915	ENSMMUG00000018458	SMG7	100	99.915	Macaca_mulatta
ENSMFAG00000031653	SMG7	100	100.000	ENSMNEG00000034798	SMG7	100	100.000	Macaca_nemestrina
ENSMFAG00000031653	SMG7	100	99.915	ENSMLEG00000037170	SMG7	100	99.915	Mandrillus_leucophaeus
ENSMFAG00000031653	SMG7	85	92.357	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSMFAG00000031653	SMG7	85	94.231	ENSMZEG00005015247	smg7	99	64.856	Maylandia_zebra
ENSMFAG00000031653	SMG7	98	84.956	ENSMGAG00000001561	SMG7	98	85.497	Meleagris_gallopavo
ENSMFAG00000031653	SMG7	100	96.757	ENSMAUG00000019484	Smg7	100	96.780	Mesocricetus_auratus
ENSMFAG00000031653	SMG7	99	98.235	ENSMICG00000007145	SMG7	100	98.259	Microcebus_murinus
ENSMFAG00000031653	SMG7	100	96.407	ENSMOCG00000020748	Smg7	100	96.432	Microtus_ochrogaster
ENSMFAG00000031653	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	63.226	Mola_mola
ENSMFAG00000031653	SMG7	84	98.701	ENSMODG00000007139	SMG7	99	89.524	Monodelphis_domestica
ENSMFAG00000031653	SMG7	85	92.994	ENSMALG00000000061	smg7	95	68.159	Monopterus_albus
ENSMFAG00000031653	SMG7	100	96.319	MGP_CAROLIEiJ_G0014704	Smg7	100	96.345	Mus_caroli
ENSMFAG00000031653	SMG7	100	96.231	ENSMUSG00000042772	Smg7	100	96.258	Mus_musculus
ENSMFAG00000031653	SMG7	100	96.319	MGP_PahariEiJ_G0027940	Smg7	100	96.345	Mus_pahari
ENSMFAG00000031653	SMG7	100	96.319	MGP_SPRETEiJ_G0015511	Smg7	100	96.345	Mus_spretus
ENSMFAG00000031653	SMG7	98	97.326	ENSMPUG00000011732	SMG7	97	97.326	Mustela_putorius_furo
ENSMFAG00000031653	SMG7	99	96.734	ENSMLUG00000015417	SMG7	99	96.734	Myotis_lucifugus
ENSMFAG00000031653	SMG7	99	96.558	ENSNGAG00000009836	Smg7	100	96.606	Nannospalax_galili
ENSMFAG00000031653	SMG7	100	58.355	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSMFAG00000031653	SMG7	100	99.573	ENSNLEG00000018018	SMG7	100	99.573	Nomascus_leucogenys
ENSMFAG00000031653	SMG7	77	86.704	ENSMEUG00000004681	SMG7	77	86.890	Notamacropus_eugenii
ENSMFAG00000031653	SMG7	85	96.178	ENSOPRG00000013942	SMG7	96	84.749	Ochotona_princeps
ENSMFAG00000031653	SMG7	100	97.371	ENSODEG00000010390	SMG7	100	97.389	Octodon_degus
ENSMFAG00000031653	SMG7	84	94.194	ENSONIG00000000277	smg7	99	64.414	Oreochromis_niloticus
ENSMFAG00000031653	SMG7	98	91.135	ENSOANG00000000994	SMG7	100	91.046	Ornithorhynchus_anatinus
ENSMFAG00000031653	SMG7	100	89.829	ENSOCUG00000005887	SMG7	95	90.000	Oryctolagus_cuniculus
ENSMFAG00000031653	SMG7	97	83.240	ENSORLG00000007314	smg7	77	85.965	Oryzias_latipes
ENSMFAG00000031653	SMG7	85	91.083	ENSORLG00020015779	smg7	78	85.057	Oryzias_latipes_hni
ENSMFAG00000031653	SMG7	89	87.805	ENSORLG00015012289	smg7	99	62.760	Oryzias_latipes_hsok
ENSMFAG00000031653	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	62.926	Oryzias_melastigma
ENSMFAG00000031653	SMG7	97	96.192	ENSOGAG00000003107	SMG7	94	96.102	Otolemur_garnettii
ENSMFAG00000031653	SMG7	100	96.496	ENSOARG00000001352	SMG7	100	96.496	Ovis_aries
ENSMFAG00000031653	SMG7	100	99.563	ENSPPAG00000031619	SMG7	100	99.563	Pan_paniscus
ENSMFAG00000031653	SMG7	99	97.776	ENSPPRG00000011222	SMG7	100	97.776	Panthera_pardus
ENSMFAG00000031653	SMG7	100	97.817	ENSPTIG00000007242	SMG7	100	97.817	Panthera_tigris_altaica
ENSMFAG00000031653	SMG7	100	99.563	ENSPTRG00000001764	SMG7	100	99.563	Pan_troglodytes
ENSMFAG00000031653	SMG7	100	99.915	ENSPANG00000004520	SMG7	100	99.915	Papio_anubis
ENSMFAG00000031653	SMG7	89	89.634	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSMFAG00000031653	SMG7	99	92.145	ENSPSIG00000012201	SMG7	99	91.880	Pelodiscus_sinensis
ENSMFAG00000031653	SMG7	59	57.000	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSMFAG00000031653	SMG7	86	86.076	ENSPMGG00000002179	-	93	81.065	Periophthalmus_magnuspinnatus
ENSMFAG00000031653	SMG7	100	95.443	ENSPEMG00000011315	Smg7	100	95.474	Peromyscus_maniculatus_bairdii
ENSMFAG00000031653	SMG7	100	93.630	ENSPCIG00000003786	SMG7	100	92.424	Phascolarctos_cinereus
ENSMFAG00000031653	SMG7	85	90.446	ENSPFOG00000019219	smg7	99	63.516	Poecilia_formosa
ENSMFAG00000031653	SMG7	85	90.446	ENSPLAG00000001446	smg7	99	63.040	Poecilia_latipinna
ENSMFAG00000031653	SMG7	85	90.446	ENSPMEG00000005218	smg7	99	62.266	Poecilia_mexicana
ENSMFAG00000031653	SMG7	85	89.809	ENSPREG00000019039	smg7	92	60.208	Poecilia_reticulata
ENSMFAG00000031653	SMG7	100	95.284	ENSPPYG00000000427	SMG7	99	95.483	Pongo_abelii
ENSMFAG00000031653	SMG7	95	85.793	ENSPCAG00000008360	SMG7	94	85.793	Procavia_capensis
ENSMFAG00000031653	SMG7	100	98.205	ENSPCOG00000011996	SMG7	100	98.205	Propithecus_coquereli
ENSMFAG00000031653	SMG7	92	91.300	ENSPVAG00000000851	SMG7	89	91.635	Pteropus_vampyrus
ENSMFAG00000031653	SMG7	85	94.231	ENSPNYG00000007643	smg7	99	65.041	Pundamilia_nyererei
ENSMFAG00000031653	SMG7	88	92.593	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSMFAG00000031653	SMG7	100	96.147	ENSRNOG00000027962	Smg7	100	96.561	Rattus_norvegicus
ENSMFAG00000031653	SMG7	100	99.744	ENSRBIG00000036316	SMG7	100	99.744	Rhinopithecus_bieti
ENSMFAG00000031653	SMG7	100	99.744	ENSRROG00000035719	SMG7	100	99.744	Rhinopithecus_roxellana
ENSMFAG00000031653	SMG7	100	98.690	ENSSBOG00000023454	SMG7	100	98.690	Saimiri_boliviensis_boliviensis
ENSMFAG00000031653	SMG7	100	89.354	ENSSHAG00000013147	SMG7	99	89.390	Sarcophilus_harrisii
ENSMFAG00000031653	SMG7	84	92.903	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSMFAG00000031653	SMG7	85	92.994	ENSSMAG00000006067	smg7	99	65.091	Scophthalmus_maximus
ENSMFAG00000031653	SMG7	86	93.038	ENSSDUG00000017543	smg7	99	64.767	Seriola_dumerili
ENSMFAG00000031653	SMG7	86	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSMFAG00000031653	SMG7	100	86.162	ENSSPUG00000002064	SMG7	99	86.491	Sphenodon_punctatus
ENSMFAG00000031653	SMG7	77	94.326	ENSSPAG00000008733	smg7	98	64.938	Stegastes_partitus
ENSMFAG00000031653	SMG7	100	97.634	ENSSSCG00000015558	SMG7	100	97.634	Sus_scrofa
ENSMFAG00000031653	SMG7	100	85.243	ENSTGUG00000003928	SMG7	100	86.079	Taeniopygia_guttata
ENSMFAG00000031653	SMG7	95	82.857	ENSTRUG00000003612	-	93	83.721	Takifugu_rubripes
ENSMFAG00000031653	SMG7	84	89.103	ENSTNIG00000002802	smg7	99	64.027	Tetraodon_nigroviridis
ENSMFAG00000031653	SMG7	78	97.034	ENSTBEG00000003220	SMG7	75	97.034	Tupaia_belangeri
ENSMFAG00000031653	SMG7	96	97.352	ENSTTRG00000014778	SMG7	94	97.352	Tursiops_truncatus
ENSMFAG00000031653	SMG7	94	97.712	ENSUAMG00000017473	SMG7	100	97.712	Ursus_americanus
ENSMFAG00000031653	SMG7	100	93.712	ENSUMAG00000016389	SMG7	100	97.712	Ursus_maritimus
ENSMFAG00000031653	SMG7	100	97.546	ENSVVUG00000008976	SMG7	100	97.546	Vulpes_vulpes
ENSMFAG00000031653	SMG7	84	92.258	ENSXETG00000012528	smg7	99	69.318	Xenopus_tropicalis
ENSMFAG00000031653	SMG7	85	91.083	ENSXMAG00000007123	smg7	99	62.995	Xiphophorus_maculatus