EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000031827 (Gene tree)
Gene ID: 102129411
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 13750 bases
Position: chr10:12103609-12117358
Accession: 102129411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000017400	APOBEC_N	PF08210.11	4.2e-36	1	1
ENSMFAP00000017385	APOBEC_N	PF08210.11	4.9e-36	1	1
ENSMFAP00000017388	APOBEC_N	PF08210.11	5e-36	1	1
ENSMFAP00000017403	APOBEC_N	PF08210.11	5.8e-28	1	1
ENSMFAP00000017400	APOBEC_C	PF05240.14	1.5e-27	1	1
ENSMFAP00000017385	APOBEC_C	PF05240.14	1.5e-27	1	1
ENSMFAP00000017388	APOBEC_C	PF05240.14	1.5e-27	1	1
ENSMFAP00000017403	APOBEC_C	PF05240.14	5.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000067929	APOBEC3H-202	1903	XM_005567255	ENSMFAP00000017388	211 (aa)	XP_005567312	A0A2K5UY43
ENSMFAT00000067941	APOBEC3H-203	603	-	ENSMFAP00000017400	200 (aa)	-	A0A2K5UY66
ENSMFAT00000067926	APOBEC3H-201	1266	XM_015457181	ENSMFAP00000017385	210 (aa)	XP_015312667	A0A2K5UY49
ENSMFAT00000067945	APOBEC3H-204	465	-	ENSMFAP00000017403	154 (aa)	-	A0A2K5UY57

Gene Model

Click here to download ENSMFAG00000031827's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000031827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000031827	APOBEC3H	92	32.886	ENSMFAG00000002331	-	84	34.737
ENSMFAG00000031827	APOBEC3H	90	32.979	ENSMFAG00000016792	APOBEC3C	96	33.158
ENSMFAG00000031827	APOBEC3H	90	34.759	ENSMFAG00000008980	APOBEC3A	98	34.010
ENSMFAG00000031827	APOBEC3H	66	30.303	ENSMFAG00000000277	APOBEC1	54	32.381
ENSMFAG00000031827	APOBEC3H	89	37.173	ENSMFAG00000044711	APOBEC3G	81	37.306
ENSMFAG00000031827	APOBEC3H	93	34.328	ENSMFAG00000037834	AICDA	98	34.328
ENSMFAG00000031827	APOBEC3H	87	35.227	ENSMFAG00000004037	APOBEC3F	92	35.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000031827	APOBEC3H	100	83.766	ENSG00000100298	APOBEC3H	100	83.766	Homo_sapiens
ENSMFAG00000031827	APOBEC3H	94	49.261	ENSAMEG00000010818	-	80	49.261	Ailuropoda_melanoleuca
ENSMFAG00000031827	APOBEC3H	94	73.632	ENSANAG00000025410	APOBEC3H	96	72.430	Aotus_nancymaae
ENSMFAG00000031827	APOBEC3H	99	52.778	ENSBTAG00000007755	APOBEC3H	94	52.778	Bos_taurus
ENSMFAG00000031827	APOBEC3H	100	73.000	ENSCJAG00000012524	APOBEC3H	100	73.000	Callithrix_jacchus
ENSMFAG00000031827	APOBEC3H	94	49.495	ENSCAFG00000001361	APOBEC3Z3	100	49.495	Canis_familiaris
ENSMFAG00000031827	APOBEC3H	95	47.739	ENSCAFG00020002584	-	94	49.730	Canis_lupus_dingo
ENSMFAG00000031827	APOBEC3H	94	52.222	ENSCHIG00000026580	-	98	51.892	Capra_hircus
ENSMFAG00000031827	APOBEC3H	99	48.684	ENSTSYG00000032894	-	100	51.685	Carlito_syrichta
ENSMFAG00000031827	APOBEC3H	99	54.106	ENSCPOG00000009257	-	93	54.106	Cavia_porcellus
ENSMFAG00000031827	APOBEC3H	100	73.885	ENSCCAG00000008525	APOBEC3H	100	73.885	Cebus_capucinus
ENSMFAG00000031827	APOBEC3H	100	95.455	ENSCATG00000030302	APOBEC3H	100	95.455	Cercocebus_atys
ENSMFAG00000031827	APOBEC3H	95	53.500	ENSCLAG00000016615	-	98	53.500	Chinchilla_lanigera
ENSMFAG00000031827	APOBEC3H	100	93.365	ENSCSAG00000006371	APOBEC3H	100	93.365	Chlorocebus_sabaeus
ENSMFAG00000031827	APOBEC3H	95	53.922	ENSCGRG00001022976	Apobec3	92	53.922	Cricetulus_griseus_chok1gshd
ENSMFAG00000031827	APOBEC3H	95	53.922	ENSCGRG00000005621	Apobec3	92	53.922	Cricetulus_griseus_crigri
ENSMFAG00000031827	APOBEC3H	90	52.973	ENSDORG00000027271	-	91	52.973	Dipodomys_ordii
ENSMFAG00000031827	APOBEC3H	94	50.500	ENSECAG00000007726	APOBEC3H	85	50.500	Equus_caballus
ENSMFAG00000031827	APOBEC3H	94	52.261	ENSFCAG00000005251	APOBEC3Z3	99	51.777	Felis_catus
ENSMFAG00000031827	APOBEC3H	90	55.072	ENSSTOG00000007125	-	85	53.333	Ictidomys_tridecemlineatus
ENSMFAG00000031827	APOBEC3H	88	50.735	ENSJJAG00000016840	-	82	50.735	Jaculus_jaculus
ENSMFAG00000031827	APOBEC3H	94	52.247	ENSLAFG00000027404	-	96	52.247	Loxodonta_africana
ENSMFAG00000031827	APOBEC3H	100	98.701	ENSMMUG00000001016	APOBEC3H	100	98.701	Macaca_mulatta
ENSMFAG00000031827	APOBEC3H	100	99.052	ENSMNEG00000039259	APOBEC3H	100	99.052	Macaca_nemestrina
ENSMFAG00000031827	APOBEC3H	100	96.682	ENSMLEG00000033417	APOBEC3H	100	96.682	Mandrillus_leucophaeus
ENSMFAG00000031827	APOBEC3H	95	52.451	ENSMAUG00000011683	Apobec3	88	52.451	Mesocricetus_auratus
ENSMFAG00000031827	APOBEC3H	94	51.256	ENSMOCG00000021576	Apobec3	84	51.759	Microtus_ochrogaster
ENSMFAG00000031827	APOBEC3H	95	48.020	MGP_CAROLIEiJ_G0020029	Apobec3	99	48.020	Mus_caroli
ENSMFAG00000031827	APOBEC3H	95	46.535	ENSMUSG00000009585	Apobec3	99	46.535	Mus_musculus
ENSMFAG00000031827	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	88	48.293	Mus_pahari
ENSMFAG00000031827	APOBEC3H	94	46.500	MGP_SPRETEiJ_G0020927	Apobec3	92	47.568	Mus_spretus
ENSMFAG00000031827	APOBEC3H	94	49.746	ENSMPUG00000013239	-	75	49.746	Mustela_putorius_furo
ENSMFAG00000031827	APOBEC3H	96	47.500	ENSNGAG00000018998	Apobec3	100	47.500	Nannospalax_galili
ENSMFAG00000031827	APOBEC3H	100	86.256	ENSNLEG00000015218	-	100	86.256	Nomascus_leucogenys
ENSMFAG00000031827	APOBEC3H	93	44.134	ENSOCUG00000023913	-	88	44.134	Oryctolagus_cuniculus
ENSMFAG00000031827	APOBEC3H	94	52.222	ENSOARG00000016290	APOBEC3F	97	52.222	Ovis_aries
ENSMFAG00000031827	APOBEC3H	100	83.117	ENSPPAG00000036522	APOBEC3H	100	83.117	Pan_paniscus
ENSMFAG00000031827	APOBEC3H	94	52.020	ENSPPRG00000003941	-	99	52.020	Panthera_pardus
ENSMFAG00000031827	APOBEC3H	89	37.500	ENSPPRG00000003675	-	81	38.608	Panthera_pardus
ENSMFAG00000031827	APOBEC3H	94	52.020	ENSPTIG00000010283	-	99	52.020	Panthera_tigris_altaica
ENSMFAG00000031827	APOBEC3H	100	83.117	ENSPTRG00000014390	APOBEC3H	100	83.117	Pan_troglodytes
ENSMFAG00000031827	APOBEC3H	100	94.762	ENSPANG00000010774	APOBEC3H	100	94.762	Papio_anubis
ENSMFAG00000031827	APOBEC3H	95	48.529	ENSPEMG00000000456	Apobec3	83	48.529	Peromyscus_maniculatus_bairdii
ENSMFAG00000031827	APOBEC3H	95	88.060	ENSPPYG00000011834	-	100	86.256	Pongo_abelii
ENSMFAG00000031827	APOBEC3H	89	44.134	ENSPCAG00000015655	-	99	44.199	Procavia_capensis
ENSMFAG00000031827	APOBEC3H	64	38.583	ENSPVAG00000024161	-	93	38.583	Pteropus_vampyrus
ENSMFAG00000031827	APOBEC3H	90	51.449	ENSPVAG00000009462	-	98	51.124	Pteropus_vampyrus
ENSMFAG00000031827	APOBEC3H	64	37.795	ENSPVAG00000024267	-	93	37.795	Pteropus_vampyrus
ENSMFAG00000031827	APOBEC3H	94	51.613	ENSRNOG00000016852	Apobec3	90	51.613	Rattus_norvegicus
ENSMFAG00000031827	APOBEC3H	100	90.521	ENSRBIG00000029088	APOBEC3H	100	90.521	Rhinopithecus_bieti
ENSMFAG00000031827	APOBEC3H	100	90.000	ENSRROG00000024699	APOBEC3H	100	90.000	Rhinopithecus_roxellana
ENSMFAG00000031827	APOBEC3H	99	67.299	ENSSBOG00000030005	APOBEC3H	100	73.770	Saimiri_boliviensis_boliviensis
ENSMFAG00000031827	APOBEC3H	97	52.857	ENSSSCG00000000091	APOBEC3B	92	51.659	Sus_scrofa
ENSMFAG00000031827	APOBEC3H	84	56.923	ENSTBEG00000001532	-	100	53.143	Tupaia_belangeri
ENSMFAG00000031827	APOBEC3H	88	55.147	ENSTTRG00000001266	-	100	52.198	Tursiops_truncatus
ENSMFAG00000031827	APOBEC3H	91	52.381	ENSUAMG00000004427	-	85	51.832	Ursus_americanus
ENSMFAG00000031827	APOBEC3H	95	54.422	ENSUMAG00000014435	-	99	53.535	Ursus_maritimus
ENSMFAG00000031827	APOBEC3H	65	56.923	ENSVPAG00000011108	-	98	56.923	Vicugna_pacos