EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000032233 (Gene tree)
Gene ID: 102145789
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 63643 bases
Position: chr12:40079580-40143222
Accession: 102145789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000018312	Rif1_N	PF12231.8	2e-77	1	1
ENSMFAP00000018309	Rif1_N	PF12231.8	2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000068854	RIF1-201	10236	XM_015432194	ENSMFAP00000018309	2466 (aa)	XP_015287680	A0A2K5V0T1
ENSMFAT00000068857	RIF1-202	10158	XM_015432199	ENSMFAP00000018312	2440 (aa)	XP_015287685	A0A2K5V0S4

Gene Model

Click here to download ENSMFAG00000032233's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000032233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000032233	RIF1	100	95.186	ENSG00000080345	RIF1	97	98.538	Homo_sapiens
ENSMFAG00000032233	RIF1	51	48.574	ENSAPOG00000011073	rif1	50	48.246	Acanthochromis_polyacanthus
ENSMFAG00000032233	RIF1	99	80.194	ENSAMEG00000008461	RIF1	100	80.194	Ailuropoda_melanoleuca
ENSMFAG00000032233	RIF1	64	50.391	ENSACIG00000017765	rif1	69	50.391	Amphilophus_citrinellus
ENSMFAG00000032233	RIF1	64	48.571	ENSAOCG00000017231	rif1	64	48.571	Amphiprion_ocellaris
ENSMFAG00000032233	RIF1	65	48.289	ENSATEG00000022887	rif1	68	48.289	Anabas_testudineus
ENSMFAG00000032233	RIF1	85	66.181	ENSAPLG00000007092	RIF1	92	65.889	Anas_platyrhynchos
ENSMFAG00000032233	RIF1	87	55.616	ENSACAG00000003714	RIF1	92	55.616	Anolis_carolinensis
ENSMFAG00000032233	RIF1	100	90.413	ENSANAG00000024840	RIF1	100	90.413	Aotus_nancymaae
ENSMFAG00000032233	RIF1	94	78.943	ENSBTAG00000021020	RIF1	99	78.943	Bos_taurus
ENSMFAG00000032233	RIF1	100	89.608	ENSCJAG00000003138	RIF1	100	89.608	Callithrix_jacchus
ENSMFAG00000032233	RIF1	100	78.761	ENSCAFG00000005670	RIF1	97	78.850	Canis_familiaris
ENSMFAG00000032233	RIF1	100	78.194	ENSCAFG00020016401	RIF1	100	78.194	Canis_lupus_dingo
ENSMFAG00000032233	RIF1	100	79.089	ENSCHIG00000020327	RIF1	100	79.089	Capra_hircus
ENSMFAG00000032233	RIF1	99	79.831	ENSTSYG00000008861	RIF1	100	79.831	Carlito_syrichta
ENSMFAG00000032233	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSMFAG00000032233	RIF1	99	71.227	ENSCPOG00000037898	RIF1	99	71.227	Cavia_porcellus
ENSMFAG00000032233	RIF1	100	89.078	ENSCCAG00000024760	RIF1	100	89.078	Cebus_capucinus
ENSMFAG00000032233	RIF1	100	99.189	ENSCATG00000033353	RIF1	100	99.189	Cercocebus_atys
ENSMFAG00000032233	RIF1	96	74.414	ENSCLAG00000001517	RIF1	99	74.194	Chinchilla_lanigera
ENSMFAG00000032233	RIF1	100	98.459	ENSCSAG00000016089	RIF1	100	98.459	Chlorocebus_sabaeus
ENSMFAG00000032233	RIF1	97	77.391	ENSCHOG00000007187	RIF1	97	77.391	Choloepus_hoffmanni
ENSMFAG00000032233	RIF1	90	72.189	ENSCPBG00000025885	RIF1	96	73.373	Chrysemys_picta_bellii
ENSMFAG00000032233	RIF1	100	95.914	ENSCANG00000028962	RIF1	100	97.166	Colobus_angolensis_palliatus
ENSMFAG00000032233	RIF1	99	70.543	ENSCGRG00001024589	Rif1	100	70.543	Cricetulus_griseus_chok1gshd
ENSMFAG00000032233	RIF1	99	71.633	ENSCGRG00000010713	Rif1	100	71.633	Cricetulus_griseus_crigri
ENSMFAG00000032233	RIF1	51	49.024	ENSCVAG00000022479	rif1	53	49.024	Cyprinodon_variegatus
ENSMFAG00000032233	RIF1	99	76.923	ENSDNOG00000011194	RIF1	97	76.923	Dasypus_novemcinctus
ENSMFAG00000032233	RIF1	94	72.803	ENSETEG00000012421	RIF1	92	72.727	Echinops_telfairi
ENSMFAG00000032233	RIF1	96	87.755	ENSEASG00005023434	RIF1	98	91.749	Equus_asinus_asinus
ENSMFAG00000032233	RIF1	97	90.649	ENSECAG00000012679	RIF1	100	90.649	Equus_caballus
ENSMFAG00000032233	RIF1	65	50.796	ENSELUG00000006826	rif1	58	50.672	Esox_lucius
ENSMFAG00000032233	RIF1	100	79.437	ENSFCAG00000029742	RIF1	100	79.557	Felis_catus
ENSMFAG00000032233	RIF1	77	64.024	ENSFALG00000013874	RIF1	90	64.634	Ficedula_albicollis
ENSMFAG00000032233	RIF1	99	75.333	ENSFDAG00000006538	RIF1	99	75.333	Fukomys_damarensis
ENSMFAG00000032233	RIF1	65	50.122	ENSFHEG00000013721	rif1	68	50.081	Fundulus_heteroclitus
ENSMFAG00000032233	RIF1	53	51.042	ENSGMOG00000003517	rif1	82	50.000	Gadus_morhua
ENSMFAG00000032233	RIF1	79	65.000	ENSGALG00000012484	RIF1	91	65.000	Gallus_gallus
ENSMFAG00000032233	RIF1	66	50.278	ENSGAFG00000017196	rif1	75	51.704	Gambusia_affinis
ENSMFAG00000032233	RIF1	59	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSMFAG00000032233	RIF1	88	71.856	ENSGAGG00000012595	RIF1	97	72.973	Gopherus_agassizii
ENSMFAG00000032233	RIF1	90	98.712	ENSGGOG00000040178	RIF1	96	98.712	Gorilla_gorilla
ENSMFAG00000032233	RIF1	72	51.019	ENSHBUG00000007125	rif1	76	50.939	Haplochromis_burtoni
ENSMFAG00000032233	RIF1	95	75.448	ENSHGLG00100009807	RIF1	99	75.405	Heterocephalus_glaber_male
ENSMFAG00000032233	RIF1	63	48.683	ENSHCOG00000015943	rif1	60	48.576	Hippocampus_comes
ENSMFAG00000032233	RIF1	100	77.756	ENSSTOG00000020712	RIF1	100	77.715	Ictidomys_tridecemlineatus
ENSMFAG00000032233	RIF1	99	69.895	ENSJJAG00000023000	Rif1	100	69.814	Jaculus_jaculus
ENSMFAG00000032233	RIF1	63	49.566	ENSKMAG00000002852	rif1	53	49.566	Kryptolebias_marmoratus
ENSMFAG00000032233	RIF1	61	56.400	ENSLBEG00000023196	rif1	57	56.400	Labrus_bergylta
ENSMFAG00000032233	RIF1	86	56.892	ENSLACG00000005425	RIF1	92	56.892	Latimeria_chalumnae
ENSMFAG00000032233	RIF1	62	53.943	ENSLOCG00000002657	rif1	82	52.244	Lepisosteus_oculatus
ENSMFAG00000032233	RIF1	99	78.042	ENSLAFG00000009796	RIF1	100	78.042	Loxodonta_africana
ENSMFAG00000032233	RIF1	100	99.797	ENSMMUG00000008611	RIF1	100	99.797	Macaca_mulatta
ENSMFAG00000032233	RIF1	100	99.432	ENSMNEG00000031616	RIF1	100	99.432	Macaca_nemestrina
ENSMFAG00000032233	RIF1	100	99.230	ENSMLEG00000042945	RIF1	100	99.230	Mandrillus_leucophaeus
ENSMFAG00000032233	RIF1	75	49.383	ENSMAMG00000001745	rif1	65	49.128	Mastacembelus_armatus
ENSMFAG00000032233	RIF1	64	50.988	ENSMZEG00005020920	rif1	68	50.870	Maylandia_zebra
ENSMFAG00000032233	RIF1	84	61.756	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSMFAG00000032233	RIF1	94	89.694	ENSMAUG00000013158	Rif1	99	89.694	Mesocricetus_auratus
ENSMFAG00000032233	RIF1	100	84.274	ENSMICG00000046127	RIF1	100	84.274	Microcebus_murinus
ENSMFAG00000032233	RIF1	99	70.137	ENSMOCG00000009381	Rif1	100	70.137	Microtus_ochrogaster
ENSMFAG00000032233	RIF1	50	49.721	ENSMMOG00000006519	rif1	63	49.642	Mola_mola
ENSMFAG00000032233	RIF1	100	60.225	ENSMODG00000003703	RIF1	100	60.265	Monodelphis_domestica
ENSMFAG00000032233	RIF1	64	49.277	ENSMALG00000016759	rif1	72	49.437	Monopterus_albus
ENSMFAG00000032233	RIF1	99	69.463	MGP_CAROLIEiJ_G0023555	Rif1	100	69.544	Mus_caroli
ENSMFAG00000032233	RIF1	99	70.028	ENSMUSG00000036202	Rif1	100	70.108	Mus_musculus
ENSMFAG00000032233	RIF1	99	68.483	MGP_PahariEiJ_G0025006	Rif1	100	68.442	Mus_pahari
ENSMFAG00000032233	RIF1	99	69.770	MGP_SPRETEiJ_G0024476	Rif1	100	69.770	Mus_spretus
ENSMFAG00000032233	RIF1	100	79.420	ENSMPUG00000000371	RIF1	100	79.420	Mustela_putorius_furo
ENSMFAG00000032233	RIF1	90	76.827	ENSMLUG00000003376	RIF1	100	76.827	Myotis_lucifugus
ENSMFAG00000032233	RIF1	100	73.285	ENSNGAG00000009268	Rif1	100	73.336	Nannospalax_galili
ENSMFAG00000032233	RIF1	68	50.723	ENSNBRG00000014257	rif1	73	49.882	Neolamprologus_brichardi
ENSMFAG00000032233	RIF1	100	94.340	ENSNLEG00000010955	RIF1	100	94.463	Nomascus_leucogenys
ENSMFAG00000032233	RIF1	80	78.222	ENSMEUG00000007601	-	87	78.222	Notamacropus_eugenii
ENSMFAG00000032233	RIF1	99	72.039	ENSODEG00000003950	RIF1	99	72.401	Octodon_degus
ENSMFAG00000032233	RIF1	51	51.268	ENSONIG00000013657	rif1	52	51.187	Oreochromis_niloticus
ENSMFAG00000032233	RIF1	84	66.788	ENSOANG00000006078	-	86	66.788	Ornithorhynchus_anatinus
ENSMFAG00000032233	RIF1	100	76.492	ENSOCUG00000017435	RIF1	100	76.492	Oryctolagus_cuniculus
ENSMFAG00000032233	RIF1	64	47.850	ENSORLG00020001302	rif1	69	48.478	Oryzias_latipes_hni
ENSMFAG00000032233	RIF1	62	48.010	ENSORLG00015000009	rif1	66	48.089	Oryzias_latipes_hsok
ENSMFAG00000032233	RIF1	62	49.282	ENSOMEG00000021513	rif1	67	49.010	Oryzias_melastigma
ENSMFAG00000032233	RIF1	99	81.290	ENSOGAG00000006141	RIF1	99	81.210	Otolemur_garnettii
ENSMFAG00000032233	RIF1	100	79.130	ENSOARG00000008930	RIF1	100	79.130	Ovis_aries
ENSMFAG00000032233	RIF1	100	95.107	ENSPPAG00000023754	RIF1	100	95.107	Pan_paniscus
ENSMFAG00000032233	RIF1	100	79.405	ENSPPRG00000003618	RIF1	100	79.525	Panthera_pardus
ENSMFAG00000032233	RIF1	100	79.445	ENSPTIG00000020652	RIF1	100	79.566	Panthera_tigris_altaica
ENSMFAG00000032233	RIF1	100	95.188	ENSPTRG00000012534	RIF1	100	95.188	Pan_troglodytes
ENSMFAG00000032233	RIF1	100	98.946	ENSPANG00000008525	RIF1	100	98.946	Papio_anubis
ENSMFAG00000032233	RIF1	63	51.855	ENSPKIG00000004267	rif1	68	51.878	Paramormyrops_kingsleyae
ENSMFAG00000032233	RIF1	66	46.343	ENSPMGG00000016141	rif1	82	45.202	Periophthalmus_magnuspinnatus
ENSMFAG00000032233	RIF1	99	72.061	ENSPEMG00000000446	Rif1	99	72.020	Peromyscus_maniculatus_bairdii
ENSMFAG00000032233	RIF1	99	59.320	ENSPCIG00000009185	RIF1	99	59.928	Phascolarctos_cinereus
ENSMFAG00000032233	RIF1	59	51.801	ENSPFOG00000000554	-	68	51.708	Poecilia_formosa
ENSMFAG00000032233	RIF1	65	51.566	ENSPFOG00000017804	rif1	70	51.566	Poecilia_formosa
ENSMFAG00000032233	RIF1	65	51.613	ENSPLAG00000017945	rif1	72	51.449	Poecilia_latipinna
ENSMFAG00000032233	RIF1	53	49.902	ENSPMEG00000006897	-	66	49.804	Poecilia_mexicana
ENSMFAG00000032233	RIF1	55	64.894	ENSPREG00000018052	rif1	69	54.314	Poecilia_reticulata
ENSMFAG00000032233	RIF1	100	95.307	ENSPPYG00000012846	RIF1	100	95.429	Pongo_abelii
ENSMFAG00000032233	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSMFAG00000032233	RIF1	100	84.597	ENSPCOG00000027888	RIF1	100	84.597	Propithecus_coquereli
ENSMFAG00000032233	RIF1	93	88.866	ENSPVAG00000014276	RIF1	95	88.866	Pteropus_vampyrus
ENSMFAG00000032233	RIF1	63	49.244	ENSPNYG00000012940	rif1	67	49.166	Pundamilia_nyererei
ENSMFAG00000032233	RIF1	99	68.650	ENSRNOG00000054901	Rif1	100	68.650	Rattus_norvegicus
ENSMFAG00000032233	RIF1	100	96.601	ENSRBIG00000003704	RIF1	100	96.601	Rhinopithecus_bieti
ENSMFAG00000032233	RIF1	100	97.734	ENSRROG00000028206	RIF1	100	97.734	Rhinopithecus_roxellana
ENSMFAG00000032233	RIF1	97	96.774	ENSSBOG00000029530	RIF1	100	96.774	Saimiri_boliviensis_boliviensis
ENSMFAG00000032233	RIF1	99	60.136	ENSSHAG00000018552	RIF1	100	59.304	Sarcophilus_harrisii
ENSMFAG00000032233	RIF1	51	50.000	ENSSMAG00000011704	rif1	67	48.753	Scophthalmus_maximus
ENSMFAG00000032233	RIF1	63	51.048	ENSSDUG00000015632	rif1	77	49.580	Seriola_dumerili
ENSMFAG00000032233	RIF1	50	50.598	ENSSLDG00000019531	rif1	52	49.246	Seriola_lalandi_dorsalis
ENSMFAG00000032233	RIF1	60	83.729	ENSSARG00000007161	-	61	83.729	Sorex_araneus
ENSMFAG00000032233	RIF1	93	70.958	ENSSPUG00000003062	RIF1	99	70.958	Sphenodon_punctatus
ENSMFAG00000032233	RIF1	50	57.495	ENSSPAG00000018359	rif1	76	57.495	Stegastes_partitus
ENSMFAG00000032233	RIF1	100	79.581	ENSSSCG00000016395	RIF1	100	79.581	Sus_scrofa
ENSMFAG00000032233	RIF1	72	49.603	ENSTRUG00000015808	rif1	79	48.638	Takifugu_rubripes
ENSMFAG00000032233	RIF1	68	48.054	ENSTNIG00000011538	rif1	77	47.149	Tetraodon_nigroviridis
ENSMFAG00000032233	RIF1	83	90.506	ENSTBEG00000016082	RIF1	82	90.506	Tupaia_belangeri
ENSMFAG00000032233	RIF1	100	80.218	ENSTTRG00000011190	RIF1	100	80.218	Tursiops_truncatus
ENSMFAG00000032233	RIF1	90	79.393	ENSUAMG00000026385	RIF1	99	79.393	Ursus_americanus
ENSMFAG00000032233	RIF1	100	80.258	ENSUMAG00000000337	RIF1	100	80.258	Ursus_maritimus
ENSMFAG00000032233	RIF1	100	78.364	ENSVPAG00000002162	RIF1	100	78.284	Vicugna_pacos
ENSMFAG00000032233	RIF1	100	78.185	ENSVVUG00000011293	RIF1	100	78.185	Vulpes_vulpes
ENSMFAG00000032233	RIF1	99	43.878	ENSXETG00000004530	rif1	99	43.967	Xenopus_tropicalis
ENSMFAG00000032233	RIF1	66	48.676	ENSXMAG00000000506	rif1	68	48.873	Xiphophorus_maculatus