EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000032728 (Gene tree)
Gene ID: 101865594
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 77579 bases
Position: chr17:1669124-1746702
Accession: 101865594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000019510	RRM_1	PF00076.22	1.4e-32	1	2
ENSMFAP00000019510	RRM_1	PF00076.22	1.4e-32	2	2
ENSMFAP00000019492	RRM_1	PF00076.22	3.1e-32	1	2
ENSMFAP00000019492	RRM_1	PF00076.22	3.1e-32	2	2
ENSMFAP00000019487	RRM_1	PF00076.22	4.3e-32	1	2
ENSMFAP00000019487	RRM_1	PF00076.22	4.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000070058	PSPC1-204	1074	XM_015439047	ENSMFAP00000019510	357 (aa)	XP_015294533	A0A2K5V462
ENSMFAT00000070040	PSPC1-202	1410	-	ENSMFAP00000019492	469 (aa)	-	A0A2K5V450
ENSMFAT00000070048	PSPC1-203	297	-	ENSMFAP00000019500	98 (aa)	-	A0A2K5V454
ENSMFAT00000070035	PSPC1-201	2131	XM_005585459	ENSMFAP00000019487	523 (aa)	XP_005585516	A0A2K5V444

Gene Model

Click here to download ENSMFAG00000032728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000032728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000032728	PSPC1	81	74.483	ENSMFAG00000041557	NONO	87	72.549
ENSMFAG00000032728	PSPC1	89	74.528	ENSMFAG00000000797	SFPQ	51	68.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000032728	PSPC1	100	99.235	ENSG00000121390	PSPC1	100	99.235	Homo_sapiens
ENSMFAG00000032728	PSPC1	91	81.231	ENSAPOG00000015946	pspc1	79	73.488	Acanthochromis_polyacanthus
ENSMFAG00000032728	PSPC1	100	98.470	ENSAMEG00000017420	PSPC1	100	98.470	Ailuropoda_melanoleuca
ENSMFAG00000032728	PSPC1	91	71.914	ENSACIG00000018695	pspc1	87	59.448	Amphilophus_citrinellus
ENSMFAG00000032728	PSPC1	91	80.615	ENSAOCG00000005279	pspc1	78	73.023	Amphiprion_ocellaris
ENSMFAG00000032728	PSPC1	91	80.615	ENSAPEG00000015927	pspc1	79	73.023	Amphiprion_percula
ENSMFAG00000032728	PSPC1	91	67.593	ENSATEG00000004878	pspc1	76	61.687	Anabas_testudineus
ENSMFAG00000032728	PSPC1	77	93.812	ENSAPLG00000006246	PSPC1	100	93.812	Anas_platyrhynchos
ENSMFAG00000032728	PSPC1	89	75.786	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSMFAG00000032728	PSPC1	91	96.636	ENSACAG00000002093	PSPC1	88	91.631	Anolis_carolinensis
ENSMFAG00000032728	PSPC1	80	70.732	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSMFAG00000032728	PSPC1	100	98.470	ENSANAG00000000059	PSPC1	100	98.470	Aotus_nancymaae
ENSMFAG00000032728	PSPC1	93	70.783	ENSACLG00000027220	pspc1	87	58.672	Astatotilapia_calliptera
ENSMFAG00000032728	PSPC1	91	79.394	ENSAMXG00000036881	pspc1	80	72.874	Astyanax_mexicanus
ENSMFAG00000032728	PSPC1	100	95.985	ENSBTAG00000003934	PSPC1	100	95.985	Bos_taurus
ENSMFAG00000032728	PSPC1	100	98.470	ENSCJAG00000004554	PSPC1	100	98.470	Callithrix_jacchus
ENSMFAG00000032728	PSPC1	100	98.470	ENSCAFG00020002009	PSPC1	100	98.470	Canis_lupus_dingo
ENSMFAG00000032728	PSPC1	100	95.985	ENSCHIG00000016708	PSPC1	100	95.985	Capra_hircus
ENSMFAG00000032728	PSPC1	80	88.152	ENSTSYG00000032882	PSPC1	93	85.511	Carlito_syrichta
ENSMFAG00000032728	PSPC1	100	96.558	ENSCPOG00000000395	PSPC1	100	96.558	Cavia_porcellus
ENSMFAG00000032728	PSPC1	100	98.470	ENSCCAG00000033498	PSPC1	100	98.470	Cebus_capucinus
ENSMFAG00000032728	PSPC1	100	99.618	ENSCATG00000036434	PSPC1	100	99.618	Cercocebus_atys
ENSMFAG00000032728	PSPC1	89	87.527	ENSCLAG00000005241	PSPC1	100	87.527	Chinchilla_lanigera
ENSMFAG00000032728	PSPC1	98	97.429	ENSCHOG00000008913	PSPC1	100	91.587	Choloepus_hoffmanni
ENSMFAG00000032728	PSPC1	92	95.770	ENSCPBG00000020859	PSPC1	89	94.004	Chrysemys_picta_bellii
ENSMFAG00000032728	PSPC1	86	58.766	ENSCSAVG00000003533	-	53	61.786	Ciona_savignyi
ENSMFAG00000032728	PSPC1	73	100.000	ENSCANG00000018948	PSPC1	87	100.000	Colobus_angolensis_palliatus
ENSMFAG00000032728	PSPC1	100	96.750	ENSCGRG00001018368	Pspc1	100	96.750	Cricetulus_griseus_chok1gshd
ENSMFAG00000032728	PSPC1	100	96.750	ENSCGRG00000011724	Pspc1	100	96.750	Cricetulus_griseus_crigri
ENSMFAG00000032728	PSPC1	89	78.616	ENSCVAG00000007679	-	78	68.246	Cyprinodon_variegatus
ENSMFAG00000032728	PSPC1	97	77.586	ENSDARG00000006621	pspc1	100	67.633	Danio_rerio
ENSMFAG00000032728	PSPC1	100	97.132	ENSDNOG00000011078	PSPC1	100	97.132	Dasypus_novemcinctus
ENSMFAG00000032728	PSPC1	100	94.073	ENSDORG00000016050	Pspc1	100	94.073	Dipodomys_ordii
ENSMFAG00000032728	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSMFAG00000032728	PSPC1	87	45.536	ENSEBUG00000010133	pspc1	72	51.273	Eptatretus_burgeri
ENSMFAG00000032728	PSPC1	90	73.394	ENSEBUG00000003964	-	62	72.254	Eptatretus_burgeri
ENSMFAG00000032728	PSPC1	100	97.897	ENSEASG00005000119	PSPC1	100	97.897	Equus_asinus_asinus
ENSMFAG00000032728	PSPC1	100	97.897	ENSECAG00000017286	PSPC1	100	97.897	Equus_caballus
ENSMFAG00000032728	PSPC1	88	81.988	ENSEEUG00000011288	-	100	64.818	Erinaceus_europaeus
ENSMFAG00000032728	PSPC1	96	79.825	ENSELUG00000003746	pspc1	78	81.957	Esox_lucius
ENSMFAG00000032728	PSPC1	100	98.470	ENSFCAG00000027841	PSPC1	100	98.470	Felis_catus
ENSMFAG00000032728	PSPC1	92	96.375	ENSFALG00000008750	PSPC1	99	88.145	Ficedula_albicollis
ENSMFAG00000032728	PSPC1	100	94.646	ENSFDAG00000002617	PSPC1	100	94.646	Fukomys_damarensis
ENSMFAG00000032728	PSPC1	81	82.759	ENSGMOG00000015074	pspc1	86	65.376	Gadus_morhua
ENSMFAG00000032728	PSPC1	91	97.239	ENSGALG00000017142	PSPC1	89	94.647	Gallus_gallus
ENSMFAG00000032728	PSPC1	95	75.882	ENSGAFG00000006327	pspc1	67	78.154	Gambusia_affinis
ENSMFAG00000032728	PSPC1	91	73.846	ENSGACG00000014901	pspc1	92	73.394	Gasterosteus_aculeatus
ENSMFAG00000032728	PSPC1	92	95.770	ENSGAGG00000019164	PSPC1	89	94.004	Gopherus_agassizii
ENSMFAG00000032728	PSPC1	92	72.892	ENSGAGG00000017325	-	56	68.306	Gopherus_agassizii
ENSMFAG00000032728	PSPC1	100	99.044	ENSGGOG00000003414	PSPC1	100	99.044	Gorilla_gorilla
ENSMFAG00000032728	PSPC1	91	79.385	ENSHBUG00000001139	pspc1	87	69.528	Haplochromis_burtoni
ENSMFAG00000032728	PSPC1	100	96.558	ENSHGLG00000018811	PSPC1	100	96.558	Heterocephalus_glaber_female
ENSMFAG00000032728	PSPC1	85	97.682	ENSHGLG00100007962	PSPC1	100	92.286	Heterocephalus_glaber_male
ENSMFAG00000032728	PSPC1	91	74.233	ENSHCOG00000013251	pspc1	83	71.658	Hippocampus_comes
ENSMFAG00000032728	PSPC1	96	80.870	ENSIPUG00000013192	pspc1	88	73.673	Ictalurus_punctatus
ENSMFAG00000032728	PSPC1	100	97.706	ENSSTOG00000026833	PSPC1	100	97.706	Ictidomys_tridecemlineatus
ENSMFAG00000032728	PSPC1	100	97.323	ENSJJAG00000018334	Pspc1	100	97.323	Jaculus_jaculus
ENSMFAG00000032728	PSPC1	81	69.204	ENSKMAG00000013525	-	84	54.194	Kryptolebias_marmoratus
ENSMFAG00000032728	PSPC1	97	76.590	ENSLBEG00000004474	pspc1	71	77.545	Labrus_bergylta
ENSMFAG00000032728	PSPC1	90	87.267	ENSLACG00000010762	PSPC1	88	85.129	Latimeria_chalumnae
ENSMFAG00000032728	PSPC1	92	86.322	ENSLOCG00000010832	pspc1	91	84.017	Lepisosteus_oculatus
ENSMFAG00000032728	PSPC1	100	96.941	ENSLAFG00000010968	PSPC1	100	96.941	Loxodonta_africana
ENSMFAG00000032728	PSPC1	100	100.000	ENSMMUG00000020262	PSPC1	100	100.000	Macaca_mulatta
ENSMFAG00000032728	PSPC1	100	100.000	ENSMNEG00000027401	PSPC1	100	100.000	Macaca_nemestrina
ENSMFAG00000032728	PSPC1	100	100.000	ENSMLEG00000039043	PSPC1	99	100.000	Mandrillus_leucophaeus
ENSMFAG00000032728	PSPC1	91	78.154	ENSMAMG00000004333	pspc1	77	71.395	Mastacembelus_armatus
ENSMFAG00000032728	PSPC1	93	70.783	ENSMZEG00005005726	pspc1	87	58.672	Maylandia_zebra
ENSMFAG00000032728	PSPC1	77	93.596	ENSMGAG00000015134	PSPC1	100	93.596	Meleagris_gallopavo
ENSMFAG00000032728	PSPC1	99	90.733	ENSMAUG00000021067	Pspc1	99	90.909	Mesocricetus_auratus
ENSMFAG00000032728	PSPC1	100	98.088	ENSMICG00000013970	PSPC1	100	98.088	Microcebus_murinus
ENSMFAG00000032728	PSPC1	100	97.514	ENSMOCG00000006060	Pspc1	100	97.514	Microtus_ochrogaster
ENSMFAG00000032728	PSPC1	96	54.651	ENSMMOG00000004352	pspc1	58	52.923	Mola_mola
ENSMFAG00000032728	PSPC1	99	96.753	ENSMODG00000008029	PSPC1	78	96.289	Monodelphis_domestica
ENSMFAG00000032728	PSPC1	96	73.639	ENSMALG00000008914	pspc1	88	67.377	Monopterus_albus
ENSMFAG00000032728	PSPC1	100	97.328	MGP_CAROLIEiJ_G0019341	Pspc1	100	97.328	Mus_caroli
ENSMFAG00000032728	PSPC1	100	97.519	ENSMUSG00000021938	Pspc1	100	97.519	Mus_musculus
ENSMFAG00000032728	PSPC1	100	97.328	MGP_PahariEiJ_G0030359	Pspc1	100	97.328	Mus_pahari
ENSMFAG00000032728	PSPC1	100	97.328	MGP_SPRETEiJ_G0020232	Pspc1	100	97.328	Mus_spretus
ENSMFAG00000032728	PSPC1	100	98.088	ENSMPUG00000013347	PSPC1	100	98.088	Mustela_putorius_furo
ENSMFAG00000032728	PSPC1	100	96.198	ENSMLUG00000017663	PSPC1	100	96.198	Myotis_lucifugus
ENSMFAG00000032728	PSPC1	100	96.941	ENSNGAG00000011271	Pspc1	100	96.941	Nannospalax_galili
ENSMFAG00000032728	PSPC1	96	68.946	ENSNBRG00000014059	pspc1	76	69.207	Neolamprologus_brichardi
ENSMFAG00000032728	PSPC1	100	99.044	ENSNLEG00000001294	PSPC1	100	99.044	Nomascus_leucogenys
ENSMFAG00000032728	PSPC1	100	76.291	ENSMEUG00000000476	PSPC1	100	76.291	Notamacropus_eugenii
ENSMFAG00000032728	PSPC1	99	88.553	ENSODEG00000019012	-	100	84.688	Octodon_degus
ENSMFAG00000032728	PSPC1	100	85.660	ENSODEG00000007817	-	100	80.151	Octodon_degus
ENSMFAG00000032728	PSPC1	91	79.692	ENSONIG00000012010	pspc1	87	68.644	Oreochromis_niloticus
ENSMFAG00000032728	PSPC1	74	99.620	ENSOANG00000009017	-	100	97.494	Ornithorhynchus_anatinus
ENSMFAG00000032728	PSPC1	98	70.085	ENSOANG00000011381	-	99	63.740	Ornithorhynchus_anatinus
ENSMFAG00000032728	PSPC1	100	97.897	ENSOCUG00000006153	PSPC1	100	97.897	Oryctolagus_cuniculus
ENSMFAG00000032728	PSPC1	91	79.077	ENSORLG00000004232	-	87	64.182	Oryzias_latipes
ENSMFAG00000032728	PSPC1	91	78.462	ENSORLG00020000578	PSPC1	87	65.199	Oryzias_latipes_hni
ENSMFAG00000032728	PSPC1	91	79.385	ENSORLG00015017480	pspc1	82	68.421	Oryzias_latipes_hsok
ENSMFAG00000032728	PSPC1	59	82.857	ENSOMEG00000003779	pspc1	96	82.775	Oryzias_melastigma
ENSMFAG00000032728	PSPC1	100	98.662	ENSOGAG00000012643	PSPC1	100	98.662	Otolemur_garnettii
ENSMFAG00000032728	PSPC1	100	91.048	ENSOARG00000014163	PSPC1	100	91.048	Ovis_aries
ENSMFAG00000032728	PSPC1	92	99.390	ENSPPAG00000009836	PSPC1	93	99.390	Pan_paniscus
ENSMFAG00000032728	PSPC1	100	98.470	ENSPPRG00000008833	PSPC1	100	98.470	Panthera_pardus
ENSMFAG00000032728	PSPC1	100	83.365	ENSPTIG00000016917	PSPC1	100	83.365	Panthera_tigris_altaica
ENSMFAG00000032728	PSPC1	99	99.134	ENSPTRG00000005677	PSPC1	99	99.177	Pan_troglodytes
ENSMFAG00000032728	PSPC1	100	99.809	ENSPANG00000001992	PSPC1	100	99.809	Papio_anubis
ENSMFAG00000032728	PSPC1	92	84.195	ENSPKIG00000003578	pspc1	81	77.880	Paramormyrops_kingsleyae
ENSMFAG00000032728	PSPC1	92	95.468	ENSPSIG00000005168	PSPC1	89	93.790	Pelodiscus_sinensis
ENSMFAG00000032728	PSPC1	86	70.476	ENSPMGG00000015135	pspc1	80	73.611	Periophthalmus_magnuspinnatus
ENSMFAG00000032728	PSPC1	100	97.323	ENSPEMG00000015214	Pspc1	100	97.323	Peromyscus_maniculatus_bairdii
ENSMFAG00000032728	PSPC1	71	47.692	ENSPMAG00000004618	pspc1	79	47.692	Petromyzon_marinus
ENSMFAG00000032728	PSPC1	99	96.743	ENSPCIG00000017680	PSPC1	100	96.743	Phascolarctos_cinereus
ENSMFAG00000032728	PSPC1	97	74.033	ENSPFOG00000003362	pspc1	88	67.865	Poecilia_formosa
ENSMFAG00000032728	PSPC1	84	68.106	ENSPLAG00000004407	-	52	60.647	Poecilia_latipinna
ENSMFAG00000032728	PSPC1	97	74.033	ENSPLAG00000011540	pspc1	87	67.865	Poecilia_latipinna
ENSMFAG00000032728	PSPC1	97	73.481	ENSPMEG00000008322	pspc1	87	67.442	Poecilia_mexicana
ENSMFAG00000032728	PSPC1	83	68.919	ENSPMEG00000001025	-	51	60.647	Poecilia_mexicana
ENSMFAG00000032728	PSPC1	97	73.204	ENSPREG00000007786	pspc1	87	67.442	Poecilia_reticulata
ENSMFAG00000032728	PSPC1	100	98.662	ENSPPYG00000005186	PSPC1	100	98.662	Pongo_abelii
ENSMFAG00000032728	PSPC1	70	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSMFAG00000032728	PSPC1	98	98.571	ENSPCOG00000014364	PSPC1	100	94.073	Propithecus_coquereli
ENSMFAG00000032728	PSPC1	98	98.006	ENSPVAG00000005036	PSPC1	100	93.308	Pteropus_vampyrus
ENSMFAG00000032728	PSPC1	93	70.783	ENSPNYG00000008893	pspc1	87	58.672	Pundamilia_nyererei
ENSMFAG00000032728	PSPC1	92	81.155	ENSPNAG00000016511	pspc1	89	72.399	Pygocentrus_nattereri
ENSMFAG00000032728	PSPC1	100	97.132	ENSRNOG00000020782	Pspc1	100	97.132	Rattus_norvegicus
ENSMFAG00000032728	PSPC1	98	99.145	ENSRBIG00000036057	PSPC1	100	99.179	Rhinopithecus_bieti
ENSMFAG00000032728	PSPC1	100	99.235	ENSRROG00000036334	PSPC1	100	99.235	Rhinopithecus_roxellana
ENSMFAG00000032728	PSPC1	75	98.134	ENSSBOG00000028172	PSPC1	88	98.134	Saimiri_boliviensis_boliviensis
ENSMFAG00000032728	PSPC1	100	91.429	ENSSHAG00000004696	PSPC1	100	91.429	Sarcophilus_harrisii
ENSMFAG00000032728	PSPC1	91	85.846	ENSSFOG00015001395	pspc1	89	78.505	Scleropages_formosus
ENSMFAG00000032728	PSPC1	96	75.358	ENSSMAG00000001761	pspc1	82	76.970	Scophthalmus_maximus
ENSMFAG00000032728	PSPC1	91	81.231	ENSSDUG00000010651	pspc1	76	73.953	Seriola_dumerili
ENSMFAG00000032728	PSPC1	92	73.252	ENSSLDG00000004284	pspc1	81	61.806	Seriola_lalandi_dorsalis
ENSMFAG00000032728	PSPC1	100	88.910	ENSSARG00000000888	PSPC1	100	89.101	Sorex_araneus
ENSMFAG00000032728	PSPC1	90	65.839	ENSSPUG00000001136	-	53	61.453	Sphenodon_punctatus
ENSMFAG00000032728	PSPC1	92	84.756	ENSSPUG00000008550	PSPC1	88	81.250	Sphenodon_punctatus
ENSMFAG00000032728	PSPC1	96	77.907	ENSSPAG00000001921	pspc1	77	72.558	Stegastes_partitus
ENSMFAG00000032728	PSPC1	100	96.947	ENSSSCG00000009569	PSPC1	100	96.947	Sus_scrofa
ENSMFAG00000032728	PSPC1	92	96.375	ENSTGUG00000011295	PSPC1	100	94.647	Taeniopygia_guttata
ENSMFAG00000032728	PSPC1	91	71.077	ENSTRUG00000011335	pspc1	77	66.180	Takifugu_rubripes
ENSMFAG00000032728	PSPC1	91	72.923	ENSTNIG00000010358	pspc1	84	66.746	Tetraodon_nigroviridis
ENSMFAG00000032728	PSPC1	93	88.589	ENSTBEG00000002361	PSPC1	100	75.908	Tupaia_belangeri
ENSMFAG00000032728	PSPC1	100	96.750	ENSTTRG00000003343	PSPC1	100	96.750	Tursiops_truncatus
ENSMFAG00000032728	PSPC1	88	99.048	ENSUAMG00000012309	PSPC1	100	98.575	Ursus_americanus
ENSMFAG00000032728	PSPC1	98	98.860	ENSUMAG00000013993	PSPC1	100	98.563	Ursus_maritimus
ENSMFAG00000032728	PSPC1	76	99.248	ENSVPAG00000010029	PSPC1	100	99.248	Vicugna_pacos
ENSMFAG00000032728	PSPC1	100	98.470	ENSVVUG00000006414	PSPC1	100	98.705	Vulpes_vulpes
ENSMFAG00000032728	PSPC1	97	73.184	ENSXCOG00000017438	pspc1	77	76.994	Xiphophorus_couchianus
ENSMFAG00000032728	PSPC1	97	73.464	ENSXMAG00000007929	pspc1	77	77.301	Xiphophorus_maculatus