EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000033725 (Gene tree)
Gene ID: 102118005
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 87239 bases
Position: chr1:31878190-31965428
Accession: 102118005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000038097	zf-CCCH	PF00642.24	0.00033	1	1
ENSMFAP00000038126	zf-CCCH	PF00642.24	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000012380	RC3H1-202	3426	XM_015445746	ENSMFAP00000038126	1141 (aa)	XP_015301232	A0A2K5WLU6
ENSMFAT00000012351	RC3H1-201	5267	XM_005540038	ENSMFAP00000038097	1133 (aa)	XP_005540095	A0A2K5WM56

Gene Model

Click here to download ENSMFAG00000033725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000033725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000033725	RC3H1	87	83.820	ENSMFAG00000035621	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000033725	RC3H1	100	99.206	ENSG00000135870	RC3H1	100	99.206	Homo_sapiens
ENSMFAG00000033725	RC3H1	100	96.999	ENSAMEG00000015657	RC3H1	100	96.999	Ailuropoda_melanoleuca
ENSMFAG00000033725	RC3H1	100	88.317	ENSAPLG00000005341	RC3H1	100	88.317	Anas_platyrhynchos
ENSMFAG00000033725	RC3H1	100	85.340	ENSACAG00000015271	RC3H1	100	85.340	Anolis_carolinensis
ENSMFAG00000033725	RC3H1	100	99.029	ENSANAG00000036716	RC3H1	100	99.029	Aotus_nancymaae
ENSMFAG00000033725	RC3H1	100	95.940	ENSBTAG00000052708	RC3H1	100	95.940	Bos_taurus
ENSMFAG00000033725	RC3H1	100	98.676	ENSCJAG00000009106	RC3H1	100	98.676	Callithrix_jacchus
ENSMFAG00000033725	RC3H1	100	97.087	ENSCAFG00000014434	RC3H1	100	97.087	Canis_familiaris
ENSMFAG00000033725	RC3H1	100	97.002	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSMFAG00000033725	RC3H1	100	96.293	ENSCHIG00000002873	RC3H1	100	96.293	Capra_hircus
ENSMFAG00000033725	RC3H1	99	95.410	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSMFAG00000033725	RC3H1	100	91.623	ENSCPOG00000004349	RC3H1	100	91.358	Cavia_porcellus
ENSMFAG00000033725	RC3H1	100	96.646	ENSCCAG00000025652	RC3H1	100	98.120	Cebus_capucinus
ENSMFAG00000033725	RC3H1	100	99.912	ENSCATG00000033497	RC3H1	100	99.912	Cercocebus_atys
ENSMFAG00000033725	RC3H1	100	94.974	ENSCLAG00000011267	RC3H1	100	94.974	Chinchilla_lanigera
ENSMFAG00000033725	RC3H1	96	99.448	ENSCSAG00000011823	RC3H1	85	99.448	Chlorocebus_sabaeus
ENSMFAG00000033725	RC3H1	100	89.825	ENSCPBG00000014670	RC3H1	100	90.079	Chrysemys_picta_bellii
ENSMFAG00000033725	RC3H1	100	99.559	ENSCANG00000032120	RC3H1	100	99.559	Colobus_angolensis_palliatus
ENSMFAG00000033725	RC3H1	100	94.263	ENSCGRG00001020812	Rc3h1	100	93.822	Cricetulus_griseus_chok1gshd
ENSMFAG00000033725	RC3H1	100	94.263	ENSCGRG00000011952	Rc3h1	100	93.822	Cricetulus_griseus_crigri
ENSMFAG00000033725	RC3H1	55	95.659	ENSDNOG00000011494	RC3H1	99	95.659	Dasypus_novemcinctus
ENSMFAG00000033725	RC3H1	100	95.940	ENSDORG00000004855	Rc3h1	100	95.940	Dipodomys_ordii
ENSMFAG00000033725	RC3H1	81	96.886	ENSETEG00000012064	RC3H1	87	96.886	Echinops_telfairi
ENSMFAG00000033725	RC3H1	100	96.028	ENSEASG00005017000	RC3H1	100	96.028	Equus_asinus_asinus
ENSMFAG00000033725	RC3H1	100	95.852	ENSECAG00000021208	RC3H1	100	95.852	Equus_caballus
ENSMFAG00000033725	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSMFAG00000033725	RC3H1	100	97.440	ENSFCAG00000014924	RC3H1	100	97.440	Felis_catus
ENSMFAG00000033725	RC3H1	100	87.336	ENSFALG00000002947	RC3H1	100	86.812	Ficedula_albicollis
ENSMFAG00000033725	RC3H1	100	95.150	ENSFDAG00000013303	RC3H1	100	95.150	Fukomys_damarensis
ENSMFAG00000033725	RC3H1	100	87.292	ENSGALG00000004587	RC3H1	100	87.292	Gallus_gallus
ENSMFAG00000033725	RC3H1	100	88.344	ENSGAGG00000018194	RC3H1	100	88.606	Gopherus_agassizii
ENSMFAG00000033725	RC3H1	100	92.260	ENSGGOG00000005735	RC3H1	100	92.260	Gorilla_gorilla
ENSMFAG00000033725	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSMFAG00000033725	RC3H1	100	94.533	ENSHGLG00100008577	RC3H1	100	94.533	Heterocephalus_glaber_male
ENSMFAG00000033725	RC3H1	100	96.561	ENSSTOG00000016033	RC3H1	100	96.561	Ictidomys_tridecemlineatus
ENSMFAG00000033725	RC3H1	100	95.234	ENSJJAG00000018915	Rc3h1	100	94.969	Jaculus_jaculus
ENSMFAG00000033725	RC3H1	100	75.652	ENSLACG00000016186	RC3H1	100	78.804	Latimeria_chalumnae
ENSMFAG00000033725	RC3H1	97	97.541	ENSLAFG00000004367	RC3H1	100	97.541	Loxodonta_africana
ENSMFAG00000033725	RC3H1	100	99.735	ENSMMUG00000000630	RC3H1	100	99.735	Macaca_mulatta
ENSMFAG00000033725	RC3H1	100	99.912	ENSMNEG00000035968	RC3H1	100	99.912	Macaca_nemestrina
ENSMFAG00000033725	RC3H1	100	99.823	ENSMLEG00000037455	RC3H1	100	99.823	Mandrillus_leucophaeus
ENSMFAG00000033725	RC3H1	97	94.456	ENSMAUG00000020864	Rc3h1	100	93.952	Mesocricetus_auratus
ENSMFAG00000033725	RC3H1	100	97.529	ENSMICG00000003000	RC3H1	100	97.529	Microcebus_murinus
ENSMFAG00000033725	RC3H1	93	92.898	ENSMOCG00000016587	Rc3h1	98	92.519	Microtus_ochrogaster
ENSMFAG00000033725	RC3H1	100	92.328	ENSMODG00000004289	RC3H1	100	92.416	Monodelphis_domestica
ENSMFAG00000033725	RC3H1	100	93.822	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.380	Mus_caroli
ENSMFAG00000033725	RC3H1	100	93.645	ENSMUSG00000040423	Rc3h1	100	93.204	Mus_musculus
ENSMFAG00000033725	RC3H1	100	93.469	MGP_PahariEiJ_G0027992	Rc3h1	100	93.027	Mus_pahari
ENSMFAG00000033725	RC3H1	100	93.469	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.027	Mus_spretus
ENSMFAG00000033725	RC3H1	100	96.737	ENSMPUG00000004747	RC3H1	100	96.737	Mustela_putorius_furo
ENSMFAG00000033725	RC3H1	100	95.587	ENSMLUG00000011127	RC3H1	100	95.587	Myotis_lucifugus
ENSMFAG00000033725	RC3H1	100	95.852	ENSNGAG00000011135	Rc3h1	100	95.410	Nannospalax_galili
ENSMFAG00000033725	RC3H1	100	99.117	ENSNLEG00000015327	RC3H1	100	99.117	Nomascus_leucogenys
ENSMFAG00000033725	RC3H1	99	82.847	ENSOPRG00000013068	RC3H1	99	82.935	Ochotona_princeps
ENSMFAG00000033725	RC3H1	100	94.621	ENSODEG00000014185	RC3H1	100	94.621	Octodon_degus
ENSMFAG00000033725	RC3H1	100	91.703	ENSOANG00000000924	RC3H1	100	91.616	Ornithorhynchus_anatinus
ENSMFAG00000033725	RC3H1	99	96.061	ENSOCUG00000004930	RC3H1	98	96.061	Oryctolagus_cuniculus
ENSMFAG00000033725	RC3H1	100	90.308	ENSOGAG00000004044	RC3H1	100	90.308	Otolemur_garnettii
ENSMFAG00000033725	RC3H1	100	96.579	ENSOARG00000013011	RC3H1	100	96.579	Ovis_aries
ENSMFAG00000033725	RC3H1	100	99.206	ENSPPAG00000039253	RC3H1	100	99.206	Pan_paniscus
ENSMFAG00000033725	RC3H1	100	96.734	ENSPPRG00000009007	RC3H1	100	96.734	Panthera_pardus
ENSMFAG00000033725	RC3H1	100	97.100	ENSPTIG00000015326	RC3H1	100	97.100	Panthera_tigris_altaica
ENSMFAG00000033725	RC3H1	100	99.206	ENSPTRG00000001702	RC3H1	100	99.206	Pan_troglodytes
ENSMFAG00000033725	RC3H1	100	99.823	ENSPANG00000008886	RC3H1	100	99.823	Papio_anubis
ENSMFAG00000033725	RC3H1	100	88.957	ENSPSIG00000016181	RC3H1	100	89.220	Pelodiscus_sinensis
ENSMFAG00000033725	RC3H1	100	93.822	ENSPEMG00000011966	Rc3h1	100	93.469	Peromyscus_maniculatus_bairdii
ENSMFAG00000033725	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSMFAG00000033725	RC3H1	100	95.852	ENSPPYG00000000490	RC3H1	100	98.026	Pongo_abelii
ENSMFAG00000033725	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMFAG00000033725	RC3H1	83	96.795	ENSPCOG00000021795	RC3H1	96	96.795	Propithecus_coquereli
ENSMFAG00000033725	RC3H1	100	87.908	ENSPVAG00000007593	RC3H1	100	87.908	Pteropus_vampyrus
ENSMFAG00000033725	RC3H1	97	61.627	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSMFAG00000033725	RC3H1	100	99.647	ENSRBIG00000037743	RC3H1	100	99.647	Rhinopithecus_bieti
ENSMFAG00000033725	RC3H1	100	99.559	ENSRROG00000036546	RC3H1	100	99.559	Rhinopithecus_roxellana
ENSMFAG00000033725	RC3H1	93	89.489	ENSSBOG00000010664	RC3H1	100	97.294	Saimiri_boliviensis_boliviensis
ENSMFAG00000033725	RC3H1	100	91.189	ENSSHAG00000007589	RC3H1	100	91.278	Sarcophilus_harrisii
ENSMFAG00000033725	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMFAG00000033725	RC3H1	100	84.501	ENSSPUG00000018472	RC3H1	100	83.961	Sphenodon_punctatus
ENSMFAG00000033725	RC3H1	100	97.440	ENSSSCG00000015498	RC3H1	100	97.440	Sus_scrofa
ENSMFAG00000033725	RC3H1	100	87.632	ENSTGUG00000004090	RC3H1	100	87.632	Taeniopygia_guttata
ENSMFAG00000033725	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSMFAG00000033725	RC3H1	100	96.652	ENSTTRG00000008572	RC3H1	100	96.652	Tursiops_truncatus
ENSMFAG00000033725	RC3H1	100	96.381	ENSUAMG00000019525	RC3H1	100	96.381	Ursus_americanus
ENSMFAG00000033725	RC3H1	100	96.914	ENSUMAG00000020087	RC3H1	100	96.914	Ursus_maritimus
ENSMFAG00000033725	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSMFAG00000033725	RC3H1	100	96.746	ENSVVUG00000014201	RC3H1	100	96.746	Vulpes_vulpes
ENSMFAG00000033725	RC3H1	100	79.112	ENSXETG00000020030	rc3h1	100	78.659	Xenopus_tropicalis