EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000034132 (Gene tree)
Gene ID: 101925644
Gene Symbol: RTCA
Alias: RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 24936 bases
Position: chr1:126556486-126581421
Accession: 101925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000007548	RTC	PF01137.21	6.1e-87	1	1
ENSMFAP00000007555	RTC	PF01137.21	3.4e-81	1	1
ENSMFAP00000007548	RTC_insert	PF05189.13	2.1e-24	1	1
ENSMFAP00000007555	RTC_insert	PF05189.13	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000026242	-	1511	XM_015451666	ENSMFAP00000007548	366 (aa)	XP_015307152	Q4R3J0
ENSMFAT00000026249	-	1140	-	ENSMFAP00000007555	379 (aa)	-	A0A2K5U5G3

Gene Model

Click here to download ENSMFAG00000034132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000034132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000034132	RTCA	100	98.945	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSMFAG00000034132	RTCA	99	71.745	ENSAPOG00000001345	rtca	98	71.745	Acanthochromis_polyacanthus
ENSMFAG00000034132	RTCA	73	94.796	ENSAMEG00000008855	RTCA	100	94.796	Ailuropoda_melanoleuca
ENSMFAG00000034132	RTCA	99	72.022	ENSACIG00000019643	rtca	99	72.022	Amphilophus_citrinellus
ENSMFAG00000034132	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSMFAG00000034132	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSMFAG00000034132	RTCA	96	71.795	ENSATEG00000006315	rtca	96	71.795	Anabas_testudineus
ENSMFAG00000034132	RTCA	96	80.508	ENSAPLG00000015430	RTCA	100	80.508	Anas_platyrhynchos
ENSMFAG00000034132	RTCA	100	97.541	ENSANAG00000025446	RTCA	100	97.541	Aotus_nancymaae
ENSMFAG00000034132	RTCA	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSMFAG00000034132	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSMFAG00000034132	RTCA	100	95.902	ENSBTAG00000006321	RTCA	100	95.902	Bos_taurus
ENSMFAG00000034132	RTCA	100	98.087	ENSCJAG00000003398	RTCA	100	98.087	Callithrix_jacchus
ENSMFAG00000034132	RTCA	100	95.355	ENSCAFG00000020010	RTCA	68	95.355	Canis_familiaris
ENSMFAG00000034132	RTCA	100	95.355	ENSCAFG00020011528	RTCA	57	95.355	Canis_lupus_dingo
ENSMFAG00000034132	RTCA	100	95.628	ENSCHIG00000018937	RTCA	100	95.628	Capra_hircus
ENSMFAG00000034132	RTCA	100	93.169	ENSTSYG00000011305	RTCA	100	93.169	Carlito_syrichta
ENSMFAG00000034132	RTCA	100	97.814	ENSCCAG00000021844	RTCA	100	97.814	Cebus_capucinus
ENSMFAG00000034132	RTCA	100	99.736	ENSCATG00000019364	RTCA	100	99.736	Cercocebus_atys
ENSMFAG00000034132	RTCA	87	96.215	ENSCLAG00000006125	RTCA	100	96.215	Chinchilla_lanigera
ENSMFAG00000034132	RTCA	100	100.000	ENSCSAG00000001509	RTCA	100	100.000	Chlorocebus_sabaeus
ENSMFAG00000034132	RTCA	100	93.716	ENSCHOG00000005211	RTCA	100	93.716	Choloepus_hoffmanni
ENSMFAG00000034132	RTCA	100	83.333	ENSCPBG00000026658	RTCA	100	83.333	Chrysemys_picta_bellii
ENSMFAG00000034132	RTCA	98	55.956	ENSCING00000007875	-	98	55.956	Ciona_intestinalis
ENSMFAG00000034132	RTCA	98	54.167	ENSCSAVG00000007269	-	98	54.167	Ciona_savignyi
ENSMFAG00000034132	RTCA	100	99.736	ENSCANG00000040106	RTCA	100	99.736	Colobus_angolensis_palliatus
ENSMFAG00000034132	RTCA	73	91.450	ENSCGRG00001013163	Rtca	85	91.450	Cricetulus_griseus_chok1gshd
ENSMFAG00000034132	RTCA	99	68.767	ENSCSEG00000000530	rtca	98	68.767	Cynoglossus_semilaevis
ENSMFAG00000034132	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSMFAG00000034132	RTCA	100	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSMFAG00000034132	RTCA	100	94.262	ENSDNOG00000000456	RTCA	100	94.262	Dasypus_novemcinctus
ENSMFAG00000034132	RTCA	100	92.623	ENSDORG00000005448	Rtca	100	92.623	Dipodomys_ordii
ENSMFAG00000034132	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSMFAG00000034132	RTCA	95	54.237	ENSEBUG00000008556	rtca	97	54.237	Eptatretus_burgeri
ENSMFAG00000034132	RTCA	100	94.809	ENSEASG00005015926	RTCA	100	94.809	Equus_asinus_asinus
ENSMFAG00000034132	RTCA	100	94.809	ENSECAG00000019831	RTCA	100	94.809	Equus_caballus
ENSMFAG00000034132	RTCA	91	83.237	ENSEEUG00000001165	RTCA	100	83.237	Erinaceus_europaeus
ENSMFAG00000034132	RTCA	99	72.299	ENSELUG00000003741	rtca	99	72.299	Esox_lucius
ENSMFAG00000034132	RTCA	100	95.355	ENSFCAG00000024460	RTCA	100	95.355	Felis_catus
ENSMFAG00000034132	RTCA	91	84.084	ENSFALG00000002443	RTCA	90	84.084	Ficedula_albicollis
ENSMFAG00000034132	RTCA	100	95.902	ENSFDAG00000012070	-	100	95.902	Fukomys_damarensis
ENSMFAG00000034132	RTCA	98	75.138	ENSFDAG00000016084	-	100	75.138	Fukomys_damarensis
ENSMFAG00000034132	RTCA	68	62.249	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSMFAG00000034132	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSMFAG00000034132	RTCA	100	83.333	ENSGALG00000005277	RTCA	100	83.333	Gallus_gallus
ENSMFAG00000034132	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSMFAG00000034132	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSMFAG00000034132	RTCA	80	84.300	ENSGAGG00000023306	RTCA	100	84.300	Gopherus_agassizii
ENSMFAG00000034132	RTCA	100	98.087	ENSGGOG00000044018	-	100	98.087	Gorilla_gorilla
ENSMFAG00000034132	RTCA	100	98.945	ENSGGOG00000009546	-	100	98.945	Gorilla_gorilla
ENSMFAG00000034132	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSMFAG00000034132	RTCA	100	95.082	ENSHGLG00000002617	RTCA	100	95.082	Heterocephalus_glaber_female
ENSMFAG00000034132	RTCA	100	95.082	ENSHGLG00100006056	RTCA	100	95.082	Heterocephalus_glaber_male
ENSMFAG00000034132	RTCA	100	64.481	ENSHCOG00000020628	rtca	89	64.481	Hippocampus_comes
ENSMFAG00000034132	RTCA	100	73.224	ENSIPUG00000024803	rtca	100	73.224	Ictalurus_punctatus
ENSMFAG00000034132	RTCA	100	88.525	ENSSTOG00000013528	-	100	88.525	Ictidomys_tridecemlineatus
ENSMFAG00000034132	RTCA	100	83.379	ENSSTOG00000033099	-	100	83.379	Ictidomys_tridecemlineatus
ENSMFAG00000034132	RTCA	100	66.940	ENSJJAG00000016178	Rtca	100	66.940	Jaculus_jaculus
ENSMFAG00000034132	RTCA	99	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSMFAG00000034132	RTCA	88	68.536	ENSLBEG00000002448	-	99	68.536	Labrus_bergylta
ENSMFAG00000034132	RTCA	99	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSMFAG00000034132	RTCA	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSMFAG00000034132	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSMFAG00000034132	RTCA	100	93.443	ENSLAFG00000001473	RTCA	100	93.443	Loxodonta_africana
ENSMFAG00000034132	RTCA	100	99.472	ENSMMUG00000019105	RTCA	100	99.472	Macaca_mulatta
ENSMFAG00000034132	RTCA	84	100.000	ENSMNEG00000037163	RTCA	100	100.000	Macaca_nemestrina
ENSMFAG00000034132	RTCA	100	82.322	ENSMLEG00000042151	RTCA	100	82.322	Mandrillus_leucophaeus
ENSMFAG00000034132	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSMFAG00000034132	RTCA	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSMFAG00000034132	RTCA	87	81.818	ENSMGAG00000006892	RTCA	100	81.250	Meleagris_gallopavo
ENSMFAG00000034132	RTCA	100	92.077	ENSMAUG00000008488	Rtca	100	92.077	Mesocricetus_auratus
ENSMFAG00000034132	RTCA	84	96.440	ENSMICG00000008643	RTCA	100	96.440	Microcebus_murinus
ENSMFAG00000034132	RTCA	100	92.350	ENSMOCG00000016660	Rtca	100	92.350	Microtus_ochrogaster
ENSMFAG00000034132	RTCA	84	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSMFAG00000034132	RTCA	100	90.437	ENSMODG00000003557	RTCA	100	90.437	Monodelphis_domestica
ENSMFAG00000034132	RTCA	100	72.678	ENSMALG00000020844	rtca	100	72.678	Monopterus_albus
ENSMFAG00000034132	RTCA	100	91.530	MGP_CAROLIEiJ_G0025565	Rtca	100	91.530	Mus_caroli
ENSMFAG00000034132	RTCA	100	90.984	ENSMUSG00000000339	Rtca	100	90.984	Mus_musculus
ENSMFAG00000034132	RTCA	100	91.257	MGP_PahariEiJ_G0027011	Rtca	100	91.257	Mus_pahari
ENSMFAG00000034132	RTCA	100	91.257	MGP_SPRETEiJ_G0026515	Rtca	100	91.257	Mus_spretus
ENSMFAG00000034132	RTCA	100	95.628	ENSMPUG00000012119	RTCA	100	95.628	Mustela_putorius_furo
ENSMFAG00000034132	RTCA	100	87.193	ENSMLUG00000009922	RTCA	100	87.193	Myotis_lucifugus
ENSMFAG00000034132	RTCA	100	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSMFAG00000034132	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSMFAG00000034132	RTCA	100	98.945	ENSNLEG00000031426	RTCA	100	98.945	Nomascus_leucogenys
ENSMFAG00000034132	RTCA	77	75.758	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSMFAG00000034132	RTCA	73	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSMFAG00000034132	RTCA	95	95.115	ENSODEG00000006990	RTCA	96	95.157	Octodon_degus
ENSMFAG00000034132	RTCA	100	70.219	ENSONIG00000007753	rtca	99	70.219	Oreochromis_niloticus
ENSMFAG00000034132	RTCA	87	88.013	ENSOANG00000012055	RTCA	98	88.013	Ornithorhynchus_anatinus
ENSMFAG00000034132	RTCA	100	95.902	ENSOCUG00000014247	RTCA	100	95.902	Oryctolagus_cuniculus
ENSMFAG00000034132	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSMFAG00000034132	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSMFAG00000034132	RTCA	100	70.492	ENSORLG00015021064	rtca	100	70.492	Oryzias_latipes_hsok
ENSMFAG00000034132	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSMFAG00000034132	RTCA	100	85.792	ENSOGAG00000005627	RTCA	100	85.792	Otolemur_garnettii
ENSMFAG00000034132	RTCA	87	94.654	ENSOARG00000018122	RTCA	100	94.654	Ovis_aries
ENSMFAG00000034132	RTCA	100	98.417	ENSPPAG00000035119	RTCA	100	98.417	Pan_paniscus
ENSMFAG00000034132	RTCA	100	95.355	ENSPPRG00000000350	RTCA	100	95.355	Panthera_pardus
ENSMFAG00000034132	RTCA	100	95.082	ENSPTIG00000012816	RTCA	100	95.082	Panthera_tigris_altaica
ENSMFAG00000034132	RTCA	100	98.417	ENSPTRG00000001004	RTCA	100	98.417	Pan_troglodytes
ENSMFAG00000034132	RTCA	100	99.180	ENSPANG00000000346	RTCA	100	99.180	Papio_anubis
ENSMFAG00000034132	RTCA	100	74.317	ENSPKIG00000001653	rtca	100	74.317	Paramormyrops_kingsleyae
ENSMFAG00000034132	RTCA	100	83.880	ENSPSIG00000011408	RTCA	100	83.880	Pelodiscus_sinensis
ENSMFAG00000034132	RTCA	100	91.530	ENSPEMG00000018582	Rtca	100	91.530	Peromyscus_maniculatus_bairdii
ENSMFAG00000034132	RTCA	100	58.583	ENSPMAG00000009110	rtca	100	58.583	Petromyzon_marinus
ENSMFAG00000034132	RTCA	100	90.710	ENSPCIG00000007684	RTCA	100	90.710	Phascolarctos_cinereus
ENSMFAG00000034132	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSMFAG00000034132	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSMFAG00000034132	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSMFAG00000034132	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSMFAG00000034132	RTCA	100	98.907	ENSPPYG00000001115	RTCA	100	98.907	Pongo_abelii
ENSMFAG00000034132	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSMFAG00000034132	RTCA	100	96.995	ENSPCOG00000005603	RTCA	100	96.995	Propithecus_coquereli
ENSMFAG00000034132	RTCA	100	93.404	ENSPVAG00000009478	RTCA	100	93.404	Pteropus_vampyrus
ENSMFAG00000034132	RTCA	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSMFAG00000034132	RTCA	100	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSMFAG00000034132	RTCA	100	91.530	ENSRNOG00000014575	Rtca	100	91.530	Rattus_norvegicus
ENSMFAG00000034132	RTCA	100	99.208	ENSRBIG00000041180	RTCA	100	99.208	Rhinopithecus_bieti
ENSMFAG00000034132	RTCA	100	99.208	ENSRROG00000024929	RTCA	100	99.208	Rhinopithecus_roxellana
ENSMFAG00000034132	RTCA	100	97.268	ENSSBOG00000028626	RTCA	100	97.268	Saimiri_boliviensis_boliviensis
ENSMFAG00000034132	RTCA	100	90.437	ENSSHAG00000001758	RTCA	100	90.437	Sarcophilus_harrisii
ENSMFAG00000034132	RTCA	98	69.167	ENSSMAG00000014680	rtca	97	69.167	Scophthalmus_maximus
ENSMFAG00000034132	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSMFAG00000034132	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSMFAG00000034132	RTCA	87	86.120	ENSSARG00000013993	RTCA	100	86.120	Sorex_araneus
ENSMFAG00000034132	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSMFAG00000034132	RTCA	100	95.082	ENSSSCG00000006865	RTCA	100	95.082	Sus_scrofa
ENSMFAG00000034132	RTCA	100	83.607	ENSTGUG00000005154	RTCA	100	83.607	Taeniopygia_guttata
ENSMFAG00000034132	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSMFAG00000034132	RTCA	100	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSMFAG00000034132	RTCA	60	90.000	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSMFAG00000034132	RTCA	100	94.195	ENSTTRG00000015327	RTCA	100	94.195	Tursiops_truncatus
ENSMFAG00000034132	RTCA	94	92.420	ENSUAMG00000017265	RTCA	96	92.420	Ursus_americanus
ENSMFAG00000034132	RTCA	100	94.536	ENSUMAG00000007881	RTCA	100	94.536	Ursus_maritimus
ENSMFAG00000034132	RTCA	87	85.489	ENSVPAG00000001039	RTCA	87	85.455	Vicugna_pacos
ENSMFAG00000034132	RTCA	100	95.082	ENSVVUG00000022041	RTCA	68	95.082	Vulpes_vulpes
ENSMFAG00000034132	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSMFAG00000034132	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSMFAG00000034132	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus