EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000034391 (Gene tree)
Gene ID: 102115721
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 86310 bases
Position: chr3:14355193-14441502
Accession: 102115721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000036041	Npa1	PF11707.8	1.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000010282	URB1-201	10188	XM_005548826	ENSMFAP00000036041	2349 (aa)	XP_005548883	A0A2K5WFZ3

Gene Model

Click here to download ENSMFAG00000034391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000034391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000034391	URB1	96	95.314	ENSG00000142207	URB1	100	95.288	Homo_sapiens
ENSMFAG00000034391	URB1	97	43.142	ENSAPOG00000020308	urb1	100	43.106	Acanthochromis_polyacanthus
ENSMFAG00000034391	URB1	97	81.602	ENSAMEG00000011998	URB1	99	81.646	Ailuropoda_melanoleuca
ENSMFAG00000034391	URB1	92	44.593	ENSACIG00000003248	urb1	97	44.686	Amphilophus_citrinellus
ENSMFAG00000034391	URB1	97	40.747	ENSAOCG00000010364	urb1	100	40.834	Amphiprion_ocellaris
ENSMFAG00000034391	URB1	94	53.263	ENSAPEG00000010758	urb1	99	53.158	Amphiprion_percula
ENSMFAG00000034391	URB1	97	43.584	ENSATEG00000011790	urb1	97	44.400	Anabas_testudineus
ENSMFAG00000034391	URB1	94	56.543	ENSAPLG00000012791	URB1	100	56.518	Anas_platyrhynchos
ENSMFAG00000034391	URB1	97	53.545	ENSACAG00000002817	URB1	99	53.229	Anolis_carolinensis
ENSMFAG00000034391	URB1	97	93.530	ENSANAG00000024617	URB1	100	93.530	Aotus_nancymaae
ENSMFAG00000034391	URB1	97	45.035	ENSACLG00000024865	urb1	100	44.880	Astatotilapia_calliptera
ENSMFAG00000034391	URB1	96	40.061	ENSAMXG00000012306	urb1	99	40.132	Astyanax_mexicanus
ENSMFAG00000034391	URB1	97	77.817	ENSBTAG00000012412	URB1	99	77.904	Bos_taurus
ENSMFAG00000034391	URB1	97	92.440	ENSCJAG00000009118	URB1	100	92.440	Callithrix_jacchus
ENSMFAG00000034391	URB1	97	82.010	ENSCAFG00000008892	URB1	100	82.010	Canis_familiaris
ENSMFAG00000034391	URB1	97	82.014	ENSCAFG00020025987	-	100	82.014	Canis_lupus_dingo
ENSMFAG00000034391	URB1	97	81.003	ENSCAFG00020025994	-	100	81.003	Canis_lupus_dingo
ENSMFAG00000034391	URB1	97	76.896	ENSCHIG00000015645	URB1	99	76.984	Capra_hircus
ENSMFAG00000034391	URB1	97	86.614	ENSTSYG00000013286	URB1	99	86.614	Carlito_syrichta
ENSMFAG00000034391	URB1	95	79.397	ENSCAPG00000015589	URB1	99	79.397	Cavia_aperea
ENSMFAG00000034391	URB1	97	80.590	ENSCPOG00000006748	URB1	99	80.590	Cavia_porcellus
ENSMFAG00000034391	URB1	97	93.483	ENSCCAG00000021299	URB1	100	93.483	Cebus_capucinus
ENSMFAG00000034391	URB1	97	98.591	ENSCATG00000042630	URB1	100	98.591	Cercocebus_atys
ENSMFAG00000034391	URB1	97	80.791	ENSCLAG00000005262	URB1	100	80.791	Chinchilla_lanigera
ENSMFAG00000034391	URB1	97	96.624	ENSCSAG00000009584	URB1	100	96.624	Chlorocebus_sabaeus
ENSMFAG00000034391	URB1	96	59.222	ENSCPBG00000006454	URB1	99	59.101	Chrysemys_picta_bellii
ENSMFAG00000034391	URB1	97	97.754	ENSCANG00000031088	URB1	100	97.754	Colobus_angolensis_palliatus
ENSMFAG00000034391	URB1	95	76.995	ENSCGRG00001010616	Urb1	99	76.717	Cricetulus_griseus_chok1gshd
ENSMFAG00000034391	URB1	94	76.553	ENSCGRG00000015840	Urb1	99	76.553	Cricetulus_griseus_crigri
ENSMFAG00000034391	URB1	96	42.460	ENSCSEG00000012616	urb1	99	42.557	Cynoglossus_semilaevis
ENSMFAG00000034391	URB1	93	52.248	ENSCVAG00000009076	urb1	99	52.489	Cyprinodon_variegatus
ENSMFAG00000034391	URB1	96	43.747	ENSDARG00000060308	urb1	99	44.263	Danio_rerio
ENSMFAG00000034391	URB1	82	80.901	ENSDNOG00000015586	URB1	99	80.901	Dasypus_novemcinctus
ENSMFAG00000034391	URB1	97	80.018	ENSDORG00000006735	Urb1	100	80.018	Dipodomys_ordii
ENSMFAG00000034391	URB1	89	81.031	ENSETEG00000009080	URB1	91	82.353	Echinops_telfairi
ENSMFAG00000034391	URB1	97	81.910	ENSEASG00005007711	URB1	100	81.838	Equus_asinus_asinus
ENSMFAG00000034391	URB1	94	89.116	ENSECAG00000013206	URB1	100	89.027	Equus_caballus
ENSMFAG00000034391	URB1	55	85.417	ENSEEUG00000003626	-	57	85.417	Erinaceus_europaeus
ENSMFAG00000034391	URB1	95	45.024	ENSELUG00000020516	urb1	98	45.214	Esox_lucius
ENSMFAG00000034391	URB1	97	81.830	ENSFCAG00000002177	URB1	100	81.910	Felis_catus
ENSMFAG00000034391	URB1	94	51.968	ENSFALG00000004636	URB1	99	51.723	Ficedula_albicollis
ENSMFAG00000034391	URB1	98	79.356	ENSFDAG00000007288	URB1	98	79.343	Fukomys_damarensis
ENSMFAG00000034391	URB1	96	41.689	ENSFHEG00000000202	urb1	99	42.026	Fundulus_heteroclitus
ENSMFAG00000034391	URB1	90	47.710	ENSGMOG00000001838	urb1	94	47.355	Gadus_morhua
ENSMFAG00000034391	URB1	96	56.780	ENSGALG00000015887	URB1	99	56.891	Gallus_gallus
ENSMFAG00000034391	URB1	91	52.593	ENSGAFG00000020694	urb1	97	52.973	Gambusia_affinis
ENSMFAG00000034391	URB1	95	44.308	ENSGACG00000011703	urb1	99	44.254	Gasterosteus_aculeatus
ENSMFAG00000034391	URB1	96	58.603	ENSGAGG00000022544	URB1	99	58.482	Gopherus_agassizii
ENSMFAG00000034391	URB1	97	95.332	ENSGGOG00000000285	URB1	100	95.332	Gorilla_gorilla
ENSMFAG00000034391	URB1	97	45.122	ENSHBUG00000001904	urb1	100	44.991	Haplochromis_burtoni
ENSMFAG00000034391	URB1	97	78.977	ENSHGLG00000004907	URB1	99	78.977	Heterocephalus_glaber_female
ENSMFAG00000034391	URB1	97	79.754	ENSHGLG00100010749	URB1	99	79.754	Heterocephalus_glaber_male
ENSMFAG00000034391	URB1	72	47.451	ENSHCOG00000018683	urb1	97	47.843	Hippocampus_comes
ENSMFAG00000034391	URB1	96	40.807	ENSIPUG00000014721	urb1	99	40.895	Ictalurus_punctatus
ENSMFAG00000034391	URB1	97	82.769	ENSSTOG00000004539	URB1	100	82.769	Ictidomys_tridecemlineatus
ENSMFAG00000034391	URB1	90	47.393	ENSKMAG00000006001	urb1	99	47.373	Kryptolebias_marmoratus
ENSMFAG00000034391	URB1	92	51.261	ENSLBEG00000027208	urb1	99	51.499	Labrus_bergylta
ENSMFAG00000034391	URB1	96	48.659	ENSLACG00000017059	URB1	100	48.616	Latimeria_chalumnae
ENSMFAG00000034391	URB1	96	46.087	ENSLOCG00000009190	urb1	99	46.261	Lepisosteus_oculatus
ENSMFAG00000034391	URB1	96	78.619	ENSLAFG00000010407	URB1	99	78.619	Loxodonta_africana
ENSMFAG00000034391	URB1	97	99.384	ENSMMUG00000010295	URB1	100	99.384	Macaca_mulatta
ENSMFAG00000034391	URB1	97	98.107	ENSMNEG00000032981	URB1	100	98.107	Macaca_nemestrina
ENSMFAG00000034391	URB1	97	98.987	ENSMLEG00000041435	URB1	100	98.987	Mandrillus_leucophaeus
ENSMFAG00000034391	URB1	96	43.188	ENSMAMG00000011238	urb1	99	43.153	Mastacembelus_armatus
ENSMFAG00000034391	URB1	97	40.984	ENSMZEG00005011862	urb1	100	40.725	Maylandia_zebra
ENSMFAG00000034391	URB1	95	57.499	ENSMGAG00000014512	URB1	99	57.410	Meleagris_gallopavo
ENSMFAG00000034391	URB1	89	79.854	ENSMAUG00000010516	Urb1	99	79.823	Mesocricetus_auratus
ENSMFAG00000034391	URB1	97	85.777	ENSMICG00000016424	URB1	99	85.777	Microcebus_murinus
ENSMFAG00000034391	URB1	97	74.626	ENSMOCG00000012613	Urb1	99	74.581	Microtus_ochrogaster
ENSMFAG00000034391	URB1	97	64.636	ENSMODG00000021076	URB1	100	64.636	Monodelphis_domestica
ENSMFAG00000034391	URB1	90	53.128	ENSMALG00000017411	urb1	96	53.326	Monopterus_albus
ENSMFAG00000034391	URB1	97	75.671	MGP_CAROLIEiJ_G0020948	Urb1	99	75.671	Mus_caroli
ENSMFAG00000034391	URB1	97	76.111	ENSMUSG00000039929	Urb1	99	76.111	Mus_musculus
ENSMFAG00000034391	URB1	97	76.155	MGP_PahariEiJ_G0016653	Urb1	99	76.155	Mus_pahari
ENSMFAG00000034391	URB1	97	75.836	MGP_SPRETEiJ_G0021854	Urb1	99	75.836	Mus_spretus
ENSMFAG00000034391	URB1	97	80.546	ENSMPUG00000001123	URB1	100	80.546	Mustela_putorius_furo
ENSMFAG00000034391	URB1	96	77.191	ENSNGAG00000001905	Urb1	99	77.147	Nannospalax_galili
ENSMFAG00000034391	URB1	79	45.879	ENSNBRG00000001049	urb1	99	45.704	Neolamprologus_brichardi
ENSMFAG00000034391	URB1	96	93.899	ENSNLEG00000026872	URB1	100	93.879	Nomascus_leucogenys
ENSMFAG00000034391	URB1	93	59.321	ENSMEUG00000010828	URB1	96	59.193	Notamacropus_eugenii
ENSMFAG00000034391	URB1	97	74.692	ENSOPRG00000013482	URB1	100	74.692	Ochotona_princeps
ENSMFAG00000034391	URB1	97	79.473	ENSODEG00000002587	URB1	99	79.473	Octodon_degus
ENSMFAG00000034391	URB1	97	45.328	ENSONIG00000005599	urb1	100	45.371	Oreochromis_niloticus
ENSMFAG00000034391	URB1	97	80.864	ENSOCUG00000009381	URB1	99	80.864	Oryctolagus_cuniculus
ENSMFAG00000034391	URB1	96	43.949	ENSORLG00000003429	urb1	99	43.926	Oryzias_latipes
ENSMFAG00000034391	URB1	96	43.815	ENSORLG00020013785	urb1	99	43.854	Oryzias_latipes_hni
ENSMFAG00000034391	URB1	92	47.072	ENSORLG00015019421	urb1	97	47.207	Oryzias_latipes_hsok
ENSMFAG00000034391	URB1	75	50.937	ENSOMEG00000002094	urb1	98	50.937	Oryzias_melastigma
ENSMFAG00000034391	URB1	97	85.066	ENSOGAG00000017140	URB1	100	85.066	Otolemur_garnettii
ENSMFAG00000034391	URB1	93	77.844	ENSOARG00000013679	URB1	99	77.844	Ovis_aries
ENSMFAG00000034391	URB1	97	95.773	ENSPPAG00000003423	URB1	100	95.773	Pan_paniscus
ENSMFAG00000034391	URB1	97	81.866	ENSPPRG00000023131	URB1	100	81.866	Panthera_pardus
ENSMFAG00000034391	URB1	89	80.089	ENSPTIG00000016125	URB1	98	80.089	Panthera_tigris_altaica
ENSMFAG00000034391	URB1	97	95.641	ENSPTRG00000013852	URB1	100	95.641	Pan_troglodytes
ENSMFAG00000034391	URB1	97	99.119	ENSPANG00000021964	URB1	100	99.119	Papio_anubis
ENSMFAG00000034391	URB1	95	45.727	ENSPKIG00000003683	urb1	98	45.870	Paramormyrops_kingsleyae
ENSMFAG00000034391	URB1	96	76.598	ENSPEMG00000021205	Urb1	99	76.598	Peromyscus_maniculatus_bairdii
ENSMFAG00000034391	URB1	70	37.386	ENSPMAG00000009733	URB1	100	34.278	Petromyzon_marinus
ENSMFAG00000034391	URB1	97	64.433	ENSPCIG00000016350	URB1	100	64.345	Phascolarctos_cinereus
ENSMFAG00000034391	URB1	92	43.144	ENSPLAG00000004371	urb1	99	43.105	Poecilia_latipinna
ENSMFAG00000034391	URB1	95	43.653	ENSPMEG00000006634	urb1	98	43.736	Poecilia_mexicana
ENSMFAG00000034391	URB1	95	43.775	ENSPREG00000013453	urb1	99	43.615	Poecilia_reticulata
ENSMFAG00000034391	URB1	96	95.137	ENSPPYG00000011359	URB1	100	95.112	Pongo_abelii
ENSMFAG00000034391	URB1	96	67.741	ENSPCAG00000007430	URB1	99	67.741	Procavia_capensis
ENSMFAG00000034391	URB1	97	86.702	ENSPCOG00000022695	URB1	100	86.702	Propithecus_coquereli
ENSMFAG00000034391	URB1	97	80.018	ENSPVAG00000000889	URB1	100	79.842	Pteropus_vampyrus
ENSMFAG00000034391	URB1	97	43.655	ENSPNYG00000010589	urb1	100	43.499	Pundamilia_nyererei
ENSMFAG00000034391	URB1	96	41.153	ENSPNAG00000019324	urb1	99	40.941	Pygocentrus_nattereri
ENSMFAG00000034391	URB1	97	75.989	ENSRNOG00000002080	Urb1	99	76.121	Rattus_norvegicus
ENSMFAG00000034391	URB1	97	97.138	ENSRBIG00000033122	URB1	100	97.138	Rhinopithecus_bieti
ENSMFAG00000034391	URB1	97	97.182	ENSRROG00000040237	URB1	100	97.182	Rhinopithecus_roxellana
ENSMFAG00000034391	URB1	97	92.474	ENSSBOG00000027672	URB1	100	92.474	Saimiri_boliviensis_boliviensis
ENSMFAG00000034391	URB1	97	64.117	ENSSHAG00000005140	URB1	100	64.117	Sarcophilus_harrisii
ENSMFAG00000034391	URB1	90	46.258	ENSSFOG00015000339	urb1	99	46.071	Scleropages_formosus
ENSMFAG00000034391	URB1	96	44.073	ENSSMAG00000003782	urb1	99	44.086	Scophthalmus_maximus
ENSMFAG00000034391	URB1	97	44.831	ENSSDUG00000012313	urb1	99	44.570	Seriola_dumerili
ENSMFAG00000034391	URB1	97	44.772	ENSSLDG00000023179	urb1	99	44.512	Seriola_lalandi_dorsalis
ENSMFAG00000034391	URB1	96	55.986	ENSSPUG00000012447	URB1	99	56.044	Sphenodon_punctatus
ENSMFAG00000034391	URB1	96	44.396	ENSSPAG00000006325	urb1	99	44.170	Stegastes_partitus
ENSMFAG00000034391	URB1	97	78.681	ENSSSCG00000032024	URB1	100	78.637	Sus_scrofa
ENSMFAG00000034391	URB1	71	58.433	ENSTGUG00000013442	URB1	100	57.980	Taeniopygia_guttata
ENSMFAG00000034391	URB1	96	43.930	ENSTRUG00000009372	urb1	99	44.150	Takifugu_rubripes
ENSMFAG00000034391	URB1	96	43.040	ENSTNIG00000016277	urb1	100	42.989	Tetraodon_nigroviridis
ENSMFAG00000034391	URB1	78	85.217	ENSTBEG00000010044	URB1	81	85.217	Tupaia_belangeri
ENSMFAG00000034391	URB1	88	79.289	ENSTTRG00000007712	URB1	92	79.498	Tursiops_truncatus
ENSMFAG00000034391	URB1	97	81.470	ENSUAMG00000012231	URB1	99	81.470	Ursus_americanus
ENSMFAG00000034391	URB1	91	81.628	ENSUMAG00000017419	URB1	98	82.876	Ursus_maritimus
ENSMFAG00000034391	URB1	66	88.095	ENSVPAG00000001164	URB1	68	88.095	Vicugna_pacos
ENSMFAG00000034391	URB1	97	81.678	ENSVVUG00000000551	URB1	100	81.678	Vulpes_vulpes
ENSMFAG00000034391	URB1	97	50.086	ENSXETG00000009895	urb1	99	50.437	Xenopus_tropicalis
ENSMFAG00000034391	URB1	97	41.102	ENSXCOG00000005500	urb1	99	41.138	Xiphophorus_couchianus
ENSMFAG00000034391	URB1	97	41.179	ENSXMAG00000007253	urb1	99	41.215	Xiphophorus_maculatus