EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000035888 (Gene tree)
Gene ID: 102120215
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 130195 bases
Position: chr20:46568463-46698657
Accession: 102120215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000021978	Not1	PF04054.15	1.6e-152	1	1
ENSMFAP00000022028	Not1	PF04054.15	1.6e-152	1	1
ENSMFAP00000022058	Not1	PF04054.15	2.2e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000030206	CNOT1-205	291	-	ENSMFAP00000022079	96 (aa)	-	A0A2K5VBF6
ENSMFAT00000030105	CNOT1-201	7723	XM_005592120	ENSMFAP00000021978	2371 (aa)	XP_005592177	A0A2K5VB84
ENSMFAT00000030155	CNOT1-202	7748	-	ENSMFAP00000022028	2383 (aa)	-	A0A2K5VBD2
ENSMFAT00000030200	CNOT1-204	4596	-	ENSMFAP00000022073	1532 (aa)	-	A0A2K5VBI5
ENSMFAT00000030185	CNOT1-203	6981	-	ENSMFAP00000022058	2326 (aa)	-	A0A2K5VBH0

Gene Model

Click here to download ENSMFAG00000035888's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000035888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000035888	CNOT1	100	99.958	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSMFAG00000035888	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSMFAG00000035888	CNOT1	100	99.789	ENSAMEG00000017298	CNOT1	100	99.789	Ailuropoda_melanoleuca
ENSMFAG00000035888	CNOT1	90	90.238	ENSACIG00000016003	cnot1	100	90.518	Amphilophus_citrinellus
ENSMFAG00000035888	CNOT1	100	90.745	ENSAPEG00000022342	cnot1	100	90.660	Amphiprion_percula
ENSMFAG00000035888	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSMFAG00000035888	CNOT1	100	97.437	ENSAPLG00000007162	CNOT1	100	97.437	Anas_platyrhynchos
ENSMFAG00000035888	CNOT1	92	95.965	ENSACAG00000001602	CNOT1	98	95.918	Anolis_carolinensis
ENSMFAG00000035888	CNOT1	100	98.581	ENSANAG00000038198	CNOT1	100	98.581	Aotus_nancymaae
ENSMFAG00000035888	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSMFAG00000035888	CNOT1	100	91.062	ENSAMXG00000013170	cnot1	100	91.614	Astyanax_mexicanus
ENSMFAG00000035888	CNOT1	100	99.537	ENSBTAG00000020782	CNOT1	100	99.537	Bos_taurus
ENSMFAG00000035888	CNOT1	82	40.277	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSMFAG00000035888	CNOT1	100	99.663	ENSCJAG00000011318	CNOT1	100	99.663	Callithrix_jacchus
ENSMFAG00000035888	CNOT1	100	99.202	ENSCAFG00000008426	CNOT1	100	99.202	Canis_familiaris
ENSMFAG00000035888	CNOT1	100	99.742	ENSCAFG00020010156	CNOT1	100	99.742	Canis_lupus_dingo
ENSMFAG00000035888	CNOT1	100	99.537	ENSCHIG00000010452	CNOT1	100	99.537	Capra_hircus
ENSMFAG00000035888	CNOT1	100	99.914	ENSTSYG00000006888	CNOT1	100	99.914	Carlito_syrichta
ENSMFAG00000035888	CNOT1	100	94.970	ENSCPOG00000013026	CNOT1	100	94.970	Cavia_porcellus
ENSMFAG00000035888	CNOT1	100	98.366	ENSCCAG00000026333	CNOT1	100	98.366	Cebus_capucinus
ENSMFAG00000035888	CNOT1	100	100.000	ENSCATG00000032625	CNOT1	100	100.000	Cercocebus_atys
ENSMFAG00000035888	CNOT1	100	99.453	ENSCLAG00000006289	CNOT1	100	99.453	Chinchilla_lanigera
ENSMFAG00000035888	CNOT1	100	99.747	ENSCSAG00000004731	CNOT1	100	99.747	Chlorocebus_sabaeus
ENSMFAG00000035888	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSMFAG00000035888	CNOT1	95	99.583	ENSCPBG00000026222	CNOT1	99	99.583	Chrysemys_picta_bellii
ENSMFAG00000035888	CNOT1	100	58.995	ENSCING00000009149	-	100	58.575	Ciona_intestinalis
ENSMFAG00000035888	CNOT1	89	63.173	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSMFAG00000035888	CNOT1	100	98.161	ENSCANG00000040534	CNOT1	100	98.161	Colobus_angolensis_palliatus
ENSMFAG00000035888	CNOT1	100	99.355	ENSCGRG00001016365	Cnot1	100	99.355	Cricetulus_griseus_chok1gshd
ENSMFAG00000035888	CNOT1	100	99.355	ENSCGRG00000001714	Cnot1	100	99.355	Cricetulus_griseus_crigri
ENSMFAG00000035888	CNOT1	100	83.326	ENSCVAG00000018930	cnot1	100	83.159	Cyprinodon_variegatus
ENSMFAG00000035888	CNOT1	100	90.172	ENSDARG00000004174	cnot1	100	90.046	Danio_rerio
ENSMFAG00000035888	CNOT1	100	96.971	ENSDNOG00000013250	CNOT1	100	96.971	Dasypus_novemcinctus
ENSMFAG00000035888	CNOT1	99	46.142	FBgn0085436	Not1	99	48.387	Drosophila_melanogaster
ENSMFAG00000035888	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSMFAG00000035888	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSMFAG00000035888	CNOT1	100	96.265	ENSEASG00005005819	CNOT1	100	98.805	Equus_asinus_asinus
ENSMFAG00000035888	CNOT1	100	99.579	ENSECAG00000009889	CNOT1	100	99.580	Equus_caballus
ENSMFAG00000035888	CNOT1	90	99.451	ENSEEUG00000006015	CNOT1	90	99.451	Erinaceus_europaeus
ENSMFAG00000035888	CNOT1	100	90.004	ENSELUG00000014085	cnot1	100	89.685	Esox_lucius
ENSMFAG00000035888	CNOT1	100	99.832	ENSFCAG00000025155	CNOT1	100	99.832	Felis_catus
ENSMFAG00000035888	CNOT1	100	97.475	ENSFALG00000007285	CNOT1	100	97.475	Ficedula_albicollis
ENSMFAG00000035888	CNOT1	100	99.613	ENSFDAG00000013399	CNOT1	100	99.613	Fukomys_damarensis
ENSMFAG00000035888	CNOT1	100	90.172	ENSFHEG00000020574	cnot1	100	90.130	Fundulus_heteroclitus
ENSMFAG00000035888	CNOT1	92	89.657	ENSGMOG00000012864	cnot1	100	90.028	Gadus_morhua
ENSMFAG00000035888	CNOT1	100	97.517	ENSGALG00000002301	CNOT1	100	97.517	Gallus_gallus
ENSMFAG00000035888	CNOT1	100	89.356	ENSGAFG00000015005	cnot1	100	89.356	Gambusia_affinis
ENSMFAG00000035888	CNOT1	92	90.450	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSMFAG00000035888	CNOT1	100	97.686	ENSGAGG00000022646	CNOT1	100	97.686	Gopherus_agassizii
ENSMFAG00000035888	CNOT1	100	99.663	ENSGGOG00000009547	CNOT1	100	99.663	Gorilla_gorilla
ENSMFAG00000035888	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSMFAG00000035888	CNOT1	100	99.527	ENSHGLG00000014322	CNOT1	100	99.527	Heterocephalus_glaber_female
ENSMFAG00000035888	CNOT1	100	89.610	ENSHCOG00000006501	cnot1	100	89.749	Hippocampus_comes
ENSMFAG00000035888	CNOT1	100	89.113	ENSIPUG00000011915	cnot1	100	89.491	Ictalurus_punctatus
ENSMFAG00000035888	CNOT1	100	99.613	ENSSTOG00000005490	CNOT1	100	99.613	Ictidomys_tridecemlineatus
ENSMFAG00000035888	CNOT1	100	99.054	ENSJJAG00000000633	Cnot1	100	99.054	Jaculus_jaculus
ENSMFAG00000035888	CNOT1	100	90.486	ENSKMAG00000006149	cnot1	100	90.323	Kryptolebias_marmoratus
ENSMFAG00000035888	CNOT1	95	96.414	ENSLBEG00000004740	cnot1	100	96.414	Labrus_bergylta
ENSMFAG00000035888	CNOT1	100	94.781	ENSLACG00000010869	CNOT1	100	94.781	Latimeria_chalumnae
ENSMFAG00000035888	CNOT1	100	93.232	ENSLOCG00000006324	cnot1	100	93.232	Lepisosteus_oculatus
ENSMFAG00000035888	CNOT1	100	99.327	ENSLAFG00000000098	CNOT1	100	99.327	Loxodonta_africana
ENSMFAG00000035888	CNOT1	100	99.957	ENSMMUG00000014625	CNOT1	100	99.957	Macaca_mulatta
ENSMFAG00000035888	CNOT1	100	97.482	ENSMNEG00000031820	CNOT1	100	99.720	Macaca_nemestrina
ENSMFAG00000035888	CNOT1	100	98.825	ENSMLEG00000040933	CNOT1	100	98.825	Mandrillus_leucophaeus
ENSMFAG00000035888	CNOT1	100	89.361	ENSMAMG00000016524	cnot1	100	89.398	Mastacembelus_armatus
ENSMFAG00000035888	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSMFAG00000035888	CNOT1	100	97.765	ENSMGAG00000001908	CNOT1	100	97.765	Meleagris_gallopavo
ENSMFAG00000035888	CNOT1	100	99.622	ENSMICG00000007071	CNOT1	100	99.622	Microcebus_murinus
ENSMFAG00000035888	CNOT1	100	99.398	ENSMOCG00000017969	Cnot1	100	99.398	Microtus_ochrogaster
ENSMFAG00000035888	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSMFAG00000035888	CNOT1	100	97.728	ENSMODG00000014199	CNOT1	100	97.728	Monodelphis_domestica
ENSMFAG00000035888	CNOT1	100	90.446	ENSMALG00000008645	cnot1	100	90.446	Monopterus_albus
ENSMFAG00000035888	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSMFAG00000035888	CNOT1	100	99.441	ENSMUSG00000036550	Cnot1	100	99.441	Mus_musculus
ENSMFAG00000035888	CNOT1	100	99.398	MGP_PahariEiJ_G0023028	Cnot1	100	99.398	Mus_pahari
ENSMFAG00000035888	CNOT1	100	99.441	MGP_SPRETEiJ_G0032549	Cnot1	100	99.441	Mus_spretus
ENSMFAG00000035888	CNOT1	100	99.579	ENSMPUG00000004830	CNOT1	100	99.579	Mustela_putorius_furo
ENSMFAG00000035888	CNOT1	100	98.906	ENSMLUG00000003728	CNOT1	100	98.906	Myotis_lucifugus
ENSMFAG00000035888	CNOT1	100	99.656	ENSNGAG00000018628	Cnot1	100	99.656	Nannospalax_galili
ENSMFAG00000035888	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSMFAG00000035888	CNOT1	100	99.914	ENSNLEG00000003566	CNOT1	100	99.914	Nomascus_leucogenys
ENSMFAG00000035888	CNOT1	87	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSMFAG00000035888	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSMFAG00000035888	CNOT1	100	99.570	ENSODEG00000016337	CNOT1	100	99.570	Octodon_degus
ENSMFAG00000035888	CNOT1	100	90.810	ENSONIG00000007358	cnot1	100	90.402	Oreochromis_niloticus
ENSMFAG00000035888	CNOT1	92	98.276	ENSOANG00000012109	CNOT1	100	98.072	Ornithorhynchus_anatinus
ENSMFAG00000035888	CNOT1	100	99.495	ENSOCUG00000006911	CNOT1	100	99.495	Oryctolagus_cuniculus
ENSMFAG00000035888	CNOT1	100	90.588	ENSORLG00000013734	cnot1	100	90.626	Oryzias_latipes
ENSMFAG00000035888	CNOT1	100	90.819	ENSORLG00020017012	cnot1	100	90.488	Oryzias_latipes_hni
ENSMFAG00000035888	CNOT1	100	90.734	ENSORLG00015007091	cnot1	100	90.231	Oryzias_latipes_hsok
ENSMFAG00000035888	CNOT1	100	90.056	ENSOMEG00000015124	cnot1	100	90.352	Oryzias_melastigma
ENSMFAG00000035888	CNOT1	100	99.411	ENSOGAG00000000543	CNOT1	100	99.411	Otolemur_garnettii
ENSMFAG00000035888	CNOT1	100	99.537	ENSOARG00000001567	CNOT1	100	99.537	Ovis_aries
ENSMFAG00000035888	CNOT1	100	99.957	ENSPPAG00000022013	CNOT1	100	99.957	Pan_paniscus
ENSMFAG00000035888	CNOT1	100	99.579	ENSPPRG00000004867	CNOT1	100	99.579	Panthera_pardus
ENSMFAG00000035888	CNOT1	100	99.579	ENSPTIG00000012589	CNOT1	100	99.579	Panthera_tigris_altaica
ENSMFAG00000035888	CNOT1	100	99.958	ENSPTRG00000008183	CNOT1	100	99.958	Pan_troglodytes
ENSMFAG00000035888	CNOT1	100	96.731	ENSPANG00000020901	CNOT1	100	96.731	Papio_anubis
ENSMFAG00000035888	CNOT1	100	92.347	ENSPKIG00000023538	CNOT1	100	92.515	Paramormyrops_kingsleyae
ENSMFAG00000035888	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSMFAG00000035888	CNOT1	100	97.559	ENSPSIG00000005499	CNOT1	100	97.559	Pelodiscus_sinensis
ENSMFAG00000035888	CNOT1	100	81.337	ENSPMAG00000009381	cnot1	100	81.237	Petromyzon_marinus
ENSMFAG00000035888	CNOT1	100	97.852	ENSPCIG00000007343	CNOT1	100	99.583	Phascolarctos_cinereus
ENSMFAG00000035888	CNOT1	99	90.000	ENSPFOG00000003497	cnot1	100	90.085	Poecilia_formosa
ENSMFAG00000035888	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.970	Poecilia_latipinna
ENSMFAG00000035888	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.970	Poecilia_mexicana
ENSMFAG00000035888	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.970	Poecilia_reticulata
ENSMFAG00000035888	CNOT1	100	99.663	ENSPPYG00000007410	CNOT1	100	99.663	Pongo_abelii
ENSMFAG00000035888	CNOT1	90	97.615	ENSPCAG00000003241	CNOT1	90	97.615	Procavia_capensis
ENSMFAG00000035888	CNOT1	100	99.664	ENSPCOG00000027139	CNOT1	100	99.664	Propithecus_coquereli
ENSMFAG00000035888	CNOT1	100	96.970	ENSPVAG00000004243	CNOT1	100	96.970	Pteropus_vampyrus
ENSMFAG00000035888	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSMFAG00000035888	CNOT1	100	90.093	ENSPNAG00000000246	cnot1	100	90.514	Pygocentrus_nattereri
ENSMFAG00000035888	CNOT1	100	99.116	ENSRNOG00000012271	Cnot1	100	99.116	Rattus_norvegicus
ENSMFAG00000035888	CNOT1	100	97.944	ENSRBIG00000044598	CNOT1	100	97.944	Rhinopithecus_bieti
ENSMFAG00000035888	CNOT1	100	100.000	ENSRROG00000000906	CNOT1	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000035888	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSMFAG00000035888	CNOT1	100	95.814	ENSSBOG00000029155	CNOT1	100	95.814	Saimiri_boliviensis_boliviensis
ENSMFAG00000035888	CNOT1	100	97.897	ENSSHAG00000012187	CNOT1	100	97.897	Sarcophilus_harrisii
ENSMFAG00000035888	CNOT1	100	92.591	ENSSFOG00015017614	cnot1	100	92.331	Scleropages_formosus
ENSMFAG00000035888	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSMFAG00000035888	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSMFAG00000035888	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSMFAG00000035888	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSMFAG00000035888	CNOT1	100	90.833	ENSSPAG00000018802	cnot1	100	90.580	Stegastes_partitus
ENSMFAG00000035888	CNOT1	100	99.411	ENSSSCG00000002799	CNOT1	100	99.411	Sus_scrofa
ENSMFAG00000035888	CNOT1	100	97.352	ENSTGUG00000005919	CNOT1	100	97.352	Taeniopygia_guttata
ENSMFAG00000035888	CNOT1	100	89.298	ENSTNIG00000018706	cnot1	100	89.144	Tetraodon_nigroviridis
ENSMFAG00000035888	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSMFAG00000035888	CNOT1	95	99.184	ENSTTRG00000008460	CNOT1	95	99.184	Tursiops_truncatus
ENSMFAG00000035888	CNOT1	100	99.579	ENSUAMG00000009251	CNOT1	100	99.579	Ursus_americanus
ENSMFAG00000035888	CNOT1	100	99.579	ENSUMAG00000021291	CNOT1	100	99.579	Ursus_maritimus
ENSMFAG00000035888	CNOT1	97	97.317	ENSVPAG00000008846	CNOT1	97	97.317	Vicugna_pacos
ENSMFAG00000035888	CNOT1	100	98.994	ENSVVUG00000024037	CNOT1	100	99.373	Vulpes_vulpes
ENSMFAG00000035888	CNOT1	100	90.450	ENSXETG00000015900	cnot1	100	90.240	Xenopus_tropicalis
ENSMFAG00000035888	CNOT1	100	89.525	ENSXCOG00000013552	cnot1	100	89.525	Xiphophorus_couchianus
ENSMFAG00000035888	CNOT1	100	89.567	ENSXMAG00000006031	cnot1	100	89.567	Xiphophorus_maculatus