EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000035948 (Gene tree)
Gene ID: 102124411
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 77253 bases
Position: chr9:85376801-85454053
Accession: 102124411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000022137	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSMFAP00000022154	DND1_DSRM	PF14709.7	2.4e-17	1	1
ENSMFAP00000022158	DND1_DSRM	PF14709.7	5.4e-17	1	1
ENSMFAP00000022154	RRM_1	PF00076.22	9.2e-40	1	3
ENSMFAP00000022154	RRM_1	PF00076.22	9.2e-40	2	3
ENSMFAP00000022154	RRM_1	PF00076.22	9.2e-40	3	3
ENSMFAP00000022137	RRM_1	PF00076.22	1e-39	1	3
ENSMFAP00000022137	RRM_1	PF00076.22	1e-39	2	3
ENSMFAP00000022137	RRM_1	PF00076.22	1e-39	3	3
ENSMFAP00000022158	RRM_1	PF00076.22	1.1e-39	1	3
ENSMFAP00000022158	RRM_1	PF00076.22	1.1e-39	2	3
ENSMFAP00000022158	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000030285	A1CF-203	1788	-	ENSMFAP00000022158	595 (aa)	-	A0A2K5VBS2
ENSMFAT00000030281	A1CF-202	1689	-	ENSMFAP00000022154	562 (aa)	-	A0A2K5VBN2
ENSMFAT00000030264	A1CF-201	2054	XM_005565851	ENSMFAP00000022137	584 (aa)	XP_005565908	A0A2K5VBN3

Gene Model

Click here to download ENSMFAG00000035948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000035948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000035948	A1CF	71	72.667	ENSMFAG00000043485	RBM46	89	72.727
ENSMFAG00000035948	A1CF	56	51.724	ENSMFAG00000039737	HNRNPR	50	51.724
ENSMFAG00000035948	A1CF	54	52.427	ENSMFAG00000036355	-	70	44.764
ENSMFAG00000035948	A1CF	78	58.628	ENSMFAG00000037967	RBM47	87	68.588
ENSMFAG00000035948	A1CF	54	48.220	ENSMFAG00000040096	-	69	41.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000035948	A1CF	100	98.126	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSMFAG00000035948	A1CF	100	74.536	ENSAPOG00000008259	a1cf	100	74.536	Acanthochromis_polyacanthus
ENSMFAG00000035948	A1CF	100	94.764	ENSAMEG00000000523	A1CF	100	94.764	Ailuropoda_melanoleuca
ENSMFAG00000035948	A1CF	100	76.364	ENSACIG00000008632	a1cf	100	77.521	Amphilophus_citrinellus
ENSMFAG00000035948	A1CF	100	75.208	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSMFAG00000035948	A1CF	100	74.056	ENSAPEG00000009537	a1cf	100	74.877	Amphiprion_percula
ENSMFAG00000035948	A1CF	100	76.733	ENSATEG00000013720	a1cf	100	78.053	Anabas_testudineus
ENSMFAG00000035948	A1CF	100	88.364	ENSAPLG00000002964	A1CF	100	88.364	Anas_platyrhynchos
ENSMFAG00000035948	A1CF	100	84.957	ENSACAG00000015269	A1CF	100	84.957	Anolis_carolinensis
ENSMFAG00000035948	A1CF	100	98.464	ENSANAG00000019974	A1CF	100	98.464	Aotus_nancymaae
ENSMFAG00000035948	A1CF	100	74.875	ENSACLG00000017428	a1cf	100	76.373	Astatotilapia_calliptera
ENSMFAG00000035948	A1CF	100	73.223	ENSAMXG00000018180	a1cf	100	73.388	Astyanax_mexicanus
ENSMFAG00000035948	A1CF	100	95.230	ENSBTAG00000021195	A1CF	100	96.468	Bos_taurus
ENSMFAG00000035948	A1CF	100	97.475	ENSCJAG00000005045	A1CF	100	97.475	Callithrix_jacchus
ENSMFAG00000035948	A1CF	100	94.088	ENSCAFG00000015581	A1CF	100	94.595	Canis_familiaris
ENSMFAG00000035948	A1CF	100	94.088	ENSCAFG00020026421	A1CF	100	94.595	Canis_lupus_dingo
ENSMFAG00000035948	A1CF	100	93.613	ENSCHIG00000020411	A1CF	100	93.782	Capra_hircus
ENSMFAG00000035948	A1CF	100	91.500	ENSTSYG00000001755	A1CF	100	97.459	Carlito_syrichta
ENSMFAG00000035948	A1CF	100	83.436	ENSCAPG00000017386	A1CF	90	95.142	Cavia_aperea
ENSMFAG00000035948	A1CF	100	95.455	ENSCPOG00000009807	A1CF	100	94.781	Cavia_porcellus
ENSMFAG00000035948	A1CF	100	97.470	ENSCCAG00000018168	A1CF	100	97.470	Cebus_capucinus
ENSMFAG00000035948	A1CF	100	99.658	ENSCATG00000043715	A1CF	100	99.658	Cercocebus_atys
ENSMFAG00000035948	A1CF	100	94.966	ENSCLAG00000010424	A1CF	100	94.631	Chinchilla_lanigera
ENSMFAG00000035948	A1CF	100	98.311	ENSCSAG00000007032	A1CF	100	98.311	Chlorocebus_sabaeus
ENSMFAG00000035948	A1CF	98	90.893	ENSCHOG00000009089	A1CF	98	90.893	Choloepus_hoffmanni
ENSMFAG00000035948	A1CF	100	88.027	ENSCPBG00000026464	A1CF	100	87.521	Chrysemys_picta_bellii
ENSMFAG00000035948	A1CF	100	98.311	ENSCANG00000038032	A1CF	100	98.311	Colobus_angolensis_palliatus
ENSMFAG00000035948	A1CF	100	92.941	ENSCGRG00001017413	A1cf	100	92.941	Cricetulus_griseus_chok1gshd
ENSMFAG00000035948	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSMFAG00000035948	A1CF	100	73.632	ENSCSEG00000002361	a1cf	100	74.959	Cynoglossus_semilaevis
ENSMFAG00000035948	A1CF	100	75.578	ENSCVAG00000010520	a1cf	100	77.063	Cyprinodon_variegatus
ENSMFAG00000035948	A1CF	100	79.322	ENSDARG00000002968	a1cf	100	80.678	Danio_rerio
ENSMFAG00000035948	A1CF	100	93.782	ENSDNOG00000002829	A1CF	100	93.782	Dasypus_novemcinctus
ENSMFAG00000035948	A1CF	82	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSMFAG00000035948	A1CF	100	95.477	ENSEASG00005012924	A1CF	100	95.477	Equus_asinus_asinus
ENSMFAG00000035948	A1CF	100	94.472	ENSECAG00000010424	A1CF	100	94.640	Equus_caballus
ENSMFAG00000035948	A1CF	82	80.472	ENSEEUG00000000013	A1CF	99	80.000	Erinaceus_europaeus
ENSMFAG00000035948	A1CF	100	77.759	ENSELUG00000003159	a1cf	100	78.595	Esox_lucius
ENSMFAG00000035948	A1CF	100	94.863	ENSFCAG00000011179	A1CF	100	94.863	Felis_catus
ENSMFAG00000035948	A1CF	100	87.692	ENSFALG00000013183	A1CF	100	87.692	Ficedula_albicollis
ENSMFAG00000035948	A1CF	100	95.741	ENSFDAG00000019371	A1CF	100	95.400	Fukomys_damarensis
ENSMFAG00000035948	A1CF	100	70.792	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSMFAG00000035948	A1CF	100	70.248	ENSGMOG00000018943	a1cf	100	70.579	Gadus_morhua
ENSMFAG00000035948	A1CF	99	83.866	ENSGALG00000003765	A1CF	97	87.544	Gallus_gallus
ENSMFAG00000035948	A1CF	100	71.000	ENSGAFG00000014868	a1cf	100	72.000	Gambusia_affinis
ENSMFAG00000035948	A1CF	100	72.697	ENSGACG00000010241	a1cf	100	73.355	Gasterosteus_aculeatus
ENSMFAG00000035948	A1CF	94	88.302	ENSGAGG00000016508	A1CF	98	86.491	Gopherus_agassizii
ENSMFAG00000035948	A1CF	100	96.975	ENSGGOG00000009670	A1CF	100	96.975	Gorilla_gorilla
ENSMFAG00000035948	A1CF	100	75.868	ENSHBUG00000021959	a1cf	100	77.190	Haplochromis_burtoni
ENSMFAG00000035948	A1CF	100	95.126	ENSHGLG00000008955	A1CF	100	94.790	Heterocephalus_glaber_female
ENSMFAG00000035948	A1CF	100	94.454	ENSHGLG00100000518	A1CF	100	94.118	Heterocephalus_glaber_male
ENSMFAG00000035948	A1CF	99	71.012	ENSHCOG00000017669	a1cf	100	71.941	Hippocampus_comes
ENSMFAG00000035948	A1CF	94	82.342	ENSIPUG00000010367	a1cf	96	82.342	Ictalurus_punctatus
ENSMFAG00000035948	A1CF	100	75.447	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSMFAG00000035948	A1CF	99	74.141	ENSLBEG00000020994	a1cf	98	75.947	Labrus_bergylta
ENSMFAG00000035948	A1CF	100	82.823	ENSLACG00000008061	A1CF	100	82.823	Latimeria_chalumnae
ENSMFAG00000035948	A1CF	100	81.575	ENSLOCG00000006302	a1cf	100	81.575	Lepisosteus_oculatus
ENSMFAG00000035948	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.445	Loxodonta_africana
ENSMFAG00000035948	A1CF	100	100.000	ENSMMUG00000007077	A1CF	100	100.000	Macaca_mulatta
ENSMFAG00000035948	A1CF	100	99.658	ENSMNEG00000031454	A1CF	100	99.658	Macaca_nemestrina
ENSMFAG00000035948	A1CF	100	99.496	ENSMLEG00000037223	A1CF	100	99.496	Mandrillus_leucophaeus
ENSMFAG00000035948	A1CF	100	74.461	ENSMAMG00000010402	a1cf	100	76.490	Mastacembelus_armatus
ENSMFAG00000035948	A1CF	100	74.874	ENSMZEG00005013245	a1cf	100	75.879	Maylandia_zebra
ENSMFAG00000035948	A1CF	100	87.710	ENSMGAG00000001507	A1CF	100	87.710	Meleagris_gallopavo
ENSMFAG00000035948	A1CF	100	92.101	ENSMAUG00000007422	A1cf	100	92.605	Mesocricetus_auratus
ENSMFAG00000035948	A1CF	100	96.271	ENSMICG00000003377	A1CF	100	96.271	Microcebus_murinus
ENSMFAG00000035948	A1CF	100	92.269	ENSMOCG00000021536	A1cf	100	92.437	Microtus_ochrogaster
ENSMFAG00000035948	A1CF	100	68.386	ENSMMOG00000009422	a1cf	100	70.333	Mola_mola
ENSMFAG00000035948	A1CF	97	89.234	ENSMODG00000016478	A1CF	99	91.620	Monodelphis_domestica
ENSMFAG00000035948	A1CF	100	73.005	ENSMALG00000012992	a1cf	100	73.005	Monopterus_albus
ENSMFAG00000035948	A1CF	100	93.186	MGP_CAROLIEiJ_G0022873	A1cf	100	93.697	Mus_caroli
ENSMFAG00000035948	A1CF	100	93.186	ENSMUSG00000052595	A1cf	99	96.063	Mus_musculus
ENSMFAG00000035948	A1CF	100	93.015	MGP_PahariEiJ_G0014366	A1cf	100	93.015	Mus_pahari
ENSMFAG00000035948	A1CF	100	92.675	MGP_SPRETEiJ_G0023792	A1cf	100	93.186	Mus_spretus
ENSMFAG00000035948	A1CF	100	89.020	ENSMPUG00000016971	A1CF	100	89.020	Mustela_putorius_furo
ENSMFAG00000035948	A1CF	100	92.941	ENSMLUG00000016071	A1CF	100	92.941	Myotis_lucifugus
ENSMFAG00000035948	A1CF	100	93.613	ENSNGAG00000015136	A1cf	100	93.782	Nannospalax_galili
ENSMFAG00000035948	A1CF	100	76.198	ENSNBRG00000001712	a1cf	100	77.521	Neolamprologus_brichardi
ENSMFAG00000035948	A1CF	100	97.815	ENSNLEG00000012028	A1CF	100	97.815	Nomascus_leucogenys
ENSMFAG00000035948	A1CF	94	91.848	ENSMEUG00000015909	A1CF	100	91.667	Notamacropus_eugenii
ENSMFAG00000035948	A1CF	93	84.250	ENSOPRG00000010667	A1CF	97	84.398	Ochotona_princeps
ENSMFAG00000035948	A1CF	100	75.537	ENSONIG00000019105	a1cf	100	77.190	Oreochromis_niloticus
ENSMFAG00000035948	A1CF	81	90.022	ENSOANG00000007360	A1CF	99	90.632	Ornithorhynchus_anatinus
ENSMFAG00000035948	A1CF	100	94.388	ENSOCUG00000011587	A1CF	100	95.068	Oryctolagus_cuniculus
ENSMFAG00000035948	A1CF	100	72.683	ENSORLG00000013342	a1cf	100	72.683	Oryzias_latipes
ENSMFAG00000035948	A1CF	100	74.141	ENSORLG00020000586	a1cf	100	74.510	Oryzias_latipes_hni
ENSMFAG00000035948	A1CF	100	74.304	ENSORLG00015018569	a1cf	100	74.673	Oryzias_latipes_hsok
ENSMFAG00000035948	A1CF	100	75.622	ENSOMEG00000013531	a1cf	100	75.622	Oryzias_melastigma
ENSMFAG00000035948	A1CF	100	94.764	ENSOGAG00000012884	A1CF	100	94.764	Otolemur_garnettii
ENSMFAG00000035948	A1CF	100	93.445	ENSOARG00000013695	A1CF	100	93.613	Ovis_aries
ENSMFAG00000035948	A1CF	100	94.380	ENSPPAG00000028115	A1CF	100	97.782	Pan_paniscus
ENSMFAG00000035948	A1CF	100	93.919	ENSPPRG00000012180	A1CF	100	93.919	Panthera_pardus
ENSMFAG00000035948	A1CF	100	93.919	ENSPTIG00000021223	A1CF	100	93.919	Panthera_tigris_altaica
ENSMFAG00000035948	A1CF	100	98.126	ENSPTRG00000002508	A1CF	100	98.126	Pan_troglodytes
ENSMFAG00000035948	A1CF	100	100.000	ENSPANG00000021988	A1CF	100	100.000	Papio_anubis
ENSMFAG00000035948	A1CF	100	79.599	ENSPKIG00000025176	a1cf	100	79.431	Paramormyrops_kingsleyae
ENSMFAG00000035948	A1CF	100	88.889	ENSPSIG00000010318	A1CF	100	88.718	Pelodiscus_sinensis
ENSMFAG00000035948	A1CF	93	70.611	ENSPMGG00000013359	a1cf	99	68.522	Periophthalmus_magnuspinnatus
ENSMFAG00000035948	A1CF	100	93.950	ENSPEMG00000015021	A1cf	100	93.782	Peromyscus_maniculatus_bairdii
ENSMFAG00000035948	A1CF	100	91.282	ENSPCIG00000002175	A1CF	100	91.111	Phascolarctos_cinereus
ENSMFAG00000035948	A1CF	100	74.919	ENSPFOG00000006683	a1cf	100	76.384	Poecilia_formosa
ENSMFAG00000035948	A1CF	100	74.756	ENSPFOG00000007437	-	100	76.221	Poecilia_formosa
ENSMFAG00000035948	A1CF	100	75.743	ENSPLAG00000001210	-	100	77.228	Poecilia_latipinna
ENSMFAG00000035948	A1CF	100	75.743	ENSPLAG00000000026	a1cf	100	77.228	Poecilia_latipinna
ENSMFAG00000035948	A1CF	100	68.212	ENSPMEG00000000921	a1cf	100	69.702	Poecilia_mexicana
ENSMFAG00000035948	A1CF	100	67.320	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSMFAG00000035948	A1CF	100	74.593	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSMFAG00000035948	A1CF	100	98.978	ENSPPYG00000002819	A1CF	100	98.978	Pongo_abelii
ENSMFAG00000035948	A1CF	79	75.431	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSMFAG00000035948	A1CF	100	95.302	ENSPCOG00000024172	A1CF	100	95.302	Propithecus_coquereli
ENSMFAG00000035948	A1CF	100	75.041	ENSPNYG00000017944	a1cf	100	76.346	Pundamilia_nyererei
ENSMFAG00000035948	A1CF	100	80.705	ENSPNAG00000007704	a1cf	100	80.705	Pygocentrus_nattereri
ENSMFAG00000035948	A1CF	100	93.526	ENSRNOG00000033195	A1cf	100	94.037	Rattus_norvegicus
ENSMFAG00000035948	A1CF	100	91.919	ENSRBIG00000042892	A1CF	100	98.800	Rhinopithecus_bieti
ENSMFAG00000035948	A1CF	100	98.649	ENSRROG00000041398	A1CF	99	100.000	Rhinopithecus_roxellana
ENSMFAG00000035948	A1CF	100	97.143	ENSSBOG00000021930	A1CF	100	98.211	Saimiri_boliviensis_boliviensis
ENSMFAG00000035948	A1CF	100	90.085	ENSSHAG00000005096	A1CF	100	90.085	Sarcophilus_harrisii
ENSMFAG00000035948	A1CF	100	79.832	ENSSFOG00015011774	a1cf	100	79.832	Scleropages_formosus
ENSMFAG00000035948	A1CF	100	74.104	ENSSMAG00000013271	a1cf	100	74.430	Scophthalmus_maximus
ENSMFAG00000035948	A1CF	100	75.290	ENSSDUG00000013930	a1cf	100	76.119	Seriola_dumerili
ENSMFAG00000035948	A1CF	100	70.401	ENSSLDG00000004290	a1cf	100	71.405	Seriola_lalandi_dorsalis
ENSMFAG00000035948	A1CF	95	84.946	ENSSARG00000005940	A1CF	96	85.305	Sorex_araneus
ENSMFAG00000035948	A1CF	99	84.797	ENSSPUG00000006797	A1CF	99	83.278	Sphenodon_punctatus
ENSMFAG00000035948	A1CF	100	94.118	ENSSSCG00000010431	A1CF	100	94.286	Sus_scrofa
ENSMFAG00000035948	A1CF	100	86.288	ENSTGUG00000005090	A1CF	100	86.288	Taeniopygia_guttata
ENSMFAG00000035948	A1CF	100	73.246	ENSTRUG00000001982	a1cf	100	73.246	Takifugu_rubripes
ENSMFAG00000035948	A1CF	100	73.984	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSMFAG00000035948	A1CF	97	88.225	ENSTTRG00000013190	A1CF	100	84.577	Tursiops_truncatus
ENSMFAG00000035948	A1CF	100	96.062	ENSUAMG00000020065	A1CF	100	96.062	Ursus_americanus
ENSMFAG00000035948	A1CF	100	94.257	ENSUMAG00000011162	A1CF	100	94.257	Ursus_maritimus
ENSMFAG00000035948	A1CF	87	91.033	ENSVPAG00000006130	A1CF	86	91.033	Vicugna_pacos
ENSMFAG00000035948	A1CF	100	95.548	ENSVVUG00000002504	A1CF	100	95.719	Vulpes_vulpes
ENSMFAG00000035948	A1CF	100	77.889	ENSXETG00000006611	a1cf	100	77.722	Xenopus_tropicalis
ENSMFAG00000035948	A1CF	100	77.076	ENSXCOG00000003302	a1cf	100	78.073	Xiphophorus_couchianus
ENSMFAG00000035948	A1CF	100	76.066	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus