EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000037013 (Gene tree)
Gene ID: 102125162
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 17615 bases
Position: chr8:146048155-146065769
Accession: 102125162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000032222	CPSF_A	PF03178.15	5.9e-92	1	1
ENSMFAP00000032211	CPSF_A	PF03178.15	1.1e-91	1	1
ENSMFAP00000032228	CPSF_A	PF03178.15	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000006432	CPSF1-201	4329	XM_005564354	ENSMFAP00000032211	1442 (aa)	XP_005564411	A0A2K5W593
ENSMFAT00000006443	CPSF1-202	3318	-	ENSMFAP00000032222	1105 (aa)	-	A0A2K5W5A1
ENSMFAT00000006449	CPSF1-203	615	-	ENSMFAP00000032228	204 (aa)	-	A0A2K5W557

Gene Model

Click here to download ENSMFAG00000037013's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000037013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000037013	CPSF1	100	99.168	ENSG00000071894	CPSF1	100	99.168	Homo_sapiens
ENSMFAG00000037013	CPSF1	100	80.556	ENSAPOG00000019621	cpsf1	100	77.905	Acanthochromis_polyacanthus
ENSMFAG00000037013	CPSF1	97	94.711	ENSAMEG00000005557	CPSF1	100	94.711	Ailuropoda_melanoleuca
ENSMFAG00000037013	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	100	77.855	Amphilophus_citrinellus
ENSMFAG00000037013	CPSF1	100	80.556	ENSAOCG00000007120	cpsf1	100	79.103	Amphiprion_ocellaris
ENSMFAG00000037013	CPSF1	100	80.556	ENSAPEG00000005755	cpsf1	100	79.394	Amphiprion_percula
ENSMFAG00000037013	CPSF1	100	80.093	ENSATEG00000011097	cpsf1	100	77.950	Anabas_testudineus
ENSMFAG00000037013	CPSF1	90	88.657	ENSACAG00000009655	CPSF1	100	81.473	Anolis_carolinensis
ENSMFAG00000037013	CPSF1	100	98.821	ENSANAG00000036514	CPSF1	100	98.821	Aotus_nancymaae
ENSMFAG00000037013	CPSF1	100	79.167	ENSACLG00000012231	cpsf1	99	78.536	Astatotilapia_calliptera
ENSMFAG00000037013	CPSF1	100	79.630	ENSAMXG00000008485	cpsf1	100	73.946	Astyanax_mexicanus
ENSMFAG00000037013	CPSF1	99	96.154	ENSBTAG00000008355	CPSF1	100	94.600	Bos_taurus
ENSMFAG00000037013	CPSF1	99	33.333	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSMFAG00000037013	CPSF1	100	98.613	ENSCJAG00000021421	CPSF1	100	98.613	Callithrix_jacchus
ENSMFAG00000037013	CPSF1	97	96.140	ENSCAFG00000001600	CPSF1	100	96.480	Canis_familiaris
ENSMFAG00000037013	CPSF1	100	96.332	ENSCAFG00020020821	CPSF1	100	96.332	Canis_lupus_dingo
ENSMFAG00000037013	CPSF1	99	95.562	ENSCHIG00000015833	CPSF1	100	90.696	Capra_hircus
ENSMFAG00000037013	CPSF1	99	98.806	ENSTSYG00000028560	CPSF1	100	97.712	Carlito_syrichta
ENSMFAG00000037013	CPSF1	97	95.054	ENSCAPG00000014921	CPSF1	99	95.054	Cavia_aperea
ENSMFAG00000037013	CPSF1	99	96.306	ENSCPOG00000011448	CPSF1	100	94.802	Cavia_porcellus
ENSMFAG00000037013	CPSF1	100	98.890	ENSCCAG00000037658	CPSF1	100	98.890	Cebus_capucinus
ENSMFAG00000037013	CPSF1	100	100.000	ENSCATG00000037234	CPSF1	100	100.000	Cercocebus_atys
ENSMFAG00000037013	CPSF1	99	97.612	ENSCLAG00000012166	CPSF1	100	96.533	Chinchilla_lanigera
ENSMFAG00000037013	CPSF1	100	99.653	ENSCSAG00000008502	CPSF1	100	99.653	Chlorocebus_sabaeus
ENSMFAG00000037013	CPSF1	99	87.334	ENSCPBG00000018910	CPSF1	96	87.334	Chrysemys_picta_bellii
ENSMFAG00000037013	CPSF1	93	54.819	ENSCING00000000514	-	100	48.422	Ciona_intestinalis
ENSMFAG00000037013	CPSF1	99	51.929	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSMFAG00000037013	CPSF1	100	99.020	ENSCANG00000032760	CPSF1	100	99.020	Colobus_angolensis_palliatus
ENSMFAG00000037013	CPSF1	100	96.394	ENSCGRG00001016344	Cpsf1	100	96.394	Cricetulus_griseus_chok1gshd
ENSMFAG00000037013	CPSF1	100	94.313	ENSCGRG00000003118	Cpsf1	100	94.313	Cricetulus_griseus_crigri
ENSMFAG00000037013	CPSF1	100	77.509	ENSCSEG00000013464	cpsf1	100	77.301	Cynoglossus_semilaevis
ENSMFAG00000037013	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSMFAG00000037013	CPSF1	99	81.493	ENSDARG00000034178	cpsf1	100	79.890	Danio_rerio
ENSMFAG00000037013	CPSF1	57	95.652	ENSDNOG00000043654	CPSF1	94	95.652	Dasypus_novemcinctus
ENSMFAG00000037013	CPSF1	97	95.842	ENSDORG00000006278	Cpsf1	99	95.842	Dipodomys_ordii
ENSMFAG00000037013	CPSF1	98	54.913	FBgn0024698	Cpsf160	100	45.326	Drosophila_melanogaster
ENSMFAG00000037013	CPSF1	80	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSMFAG00000037013	CPSF1	90	62.245	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSMFAG00000037013	CPSF1	100	96.886	ENSEASG00005010774	CPSF1	100	96.886	Equus_asinus_asinus
ENSMFAG00000037013	CPSF1	100	96.886	ENSECAG00000022209	CPSF1	100	96.886	Equus_caballus
ENSMFAG00000037013	CPSF1	100	94.602	ENSEEUG00000000471	CPSF1	100	94.602	Erinaceus_europaeus
ENSMFAG00000037013	CPSF1	100	79.630	ENSELUG00000012271	cpsf1	100	78.562	Esox_lucius
ENSMFAG00000037013	CPSF1	100	96.533	ENSFDAG00000016060	CPSF1	100	96.533	Fukomys_damarensis
ENSMFAG00000037013	CPSF1	99	78.806	ENSFHEG00000016801	cpsf1	100	76.584	Fundulus_heteroclitus
ENSMFAG00000037013	CPSF1	100	78.704	ENSGMOG00000000796	cpsf1	100	78.069	Gadus_morhua
ENSMFAG00000037013	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSMFAG00000037013	CPSF1	100	78.704	ENSGACG00000008703	cpsf1	100	78.404	Gasterosteus_aculeatus
ENSMFAG00000037013	CPSF1	99	88.358	ENSGAGG00000004276	CPSF1	98	87.332	Gopherus_agassizii
ENSMFAG00000037013	CPSF1	100	99.307	ENSGGOG00000016185	CPSF1	100	99.307	Gorilla_gorilla
ENSMFAG00000037013	CPSF1	100	62.745	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSMFAG00000037013	CPSF1	100	79.516	ENSHBUG00000018900	cpsf1	100	79.239	Haplochromis_burtoni
ENSMFAG00000037013	CPSF1	100	96.394	ENSHGLG00000016139	CPSF1	100	96.394	Heterocephalus_glaber_female
ENSMFAG00000037013	CPSF1	100	96.325	ENSHGLG00100009750	CPSF1	100	96.325	Heterocephalus_glaber_male
ENSMFAG00000037013	CPSF1	100	77.778	ENSHCOG00000018509	cpsf1	100	76.866	Hippocampus_comes
ENSMFAG00000037013	CPSF1	100	80.093	ENSIPUG00000011259	cpsf1	100	76.632	Ictalurus_punctatus
ENSMFAG00000037013	CPSF1	97	96.429	ENSSTOG00000009957	CPSF1	99	96.429	Ictidomys_tridecemlineatus
ENSMFAG00000037013	CPSF1	99	97.612	ENSJJAG00000023002	Cpsf1	100	96.186	Jaculus_jaculus
ENSMFAG00000037013	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSMFAG00000037013	CPSF1	99	80.299	ENSLBEG00000003601	cpsf1	100	77.617	Labrus_bergylta
ENSMFAG00000037013	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	92	81.370	Latimeria_chalumnae
ENSMFAG00000037013	CPSF1	100	81.651	ENSLOCG00000008484	cpsf1	100	78.261	Lepisosteus_oculatus
ENSMFAG00000037013	CPSF1	97	95.279	ENSLAFG00000022601	CPSF1	100	95.279	Loxodonta_africana
ENSMFAG00000037013	CPSF1	100	100.000	ENSMMUG00000007380	CPSF1	100	100.000	Macaca_mulatta
ENSMFAG00000037013	CPSF1	100	100.000	ENSMNEG00000043564	CPSF1	100	100.000	Macaca_nemestrina
ENSMFAG00000037013	CPSF1	100	100.000	ENSMLEG00000043010	CPSF1	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000037013	CPSF1	100	80.093	ENSMAMG00000003803	cpsf1	100	78.311	Mastacembelus_armatus
ENSMFAG00000037013	CPSF1	100	79.167	ENSMZEG00005001168	cpsf1	100	77.093	Maylandia_zebra
ENSMFAG00000037013	CPSF1	100	96.186	ENSMAUG00000003601	Cpsf1	100	96.186	Mesocricetus_auratus
ENSMFAG00000037013	CPSF1	100	97.295	ENSMICG00000015767	CPSF1	100	97.295	Microcebus_murinus
ENSMFAG00000037013	CPSF1	100	96.394	ENSMOCG00000022758	Cpsf1	100	96.394	Microtus_ochrogaster
ENSMFAG00000037013	CPSF1	100	78.838	ENSMMOG00000021245	cpsf1	100	78.838	Mola_mola
ENSMFAG00000037013	CPSF1	99	94.063	ENSMODG00000010755	CPSF1	100	92.897	Monodelphis_domestica
ENSMFAG00000037013	CPSF1	100	79.167	ENSMALG00000020545	cpsf1	100	77.537	Monopterus_albus
ENSMFAG00000037013	CPSF1	99	97.612	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.463	Mus_caroli
ENSMFAG00000037013	CPSF1	99	97.612	ENSMUSG00000034022	Cpsf1	100	96.394	Mus_musculus
ENSMFAG00000037013	CPSF1	99	97.910	MGP_PahariEiJ_G0019946	Cpsf1	100	96.394	Mus_pahari
ENSMFAG00000037013	CPSF1	99	97.612	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.394	Mus_spretus
ENSMFAG00000037013	CPSF1	94	95.556	ENSMPUG00000006419	CPSF1	93	95.556	Mustela_putorius_furo
ENSMFAG00000037013	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSMFAG00000037013	CPSF1	99	97.313	ENSNGAG00000022460	Cpsf1	100	96.186	Nannospalax_galili
ENSMFAG00000037013	CPSF1	100	79.167	ENSNBRG00000000813	cpsf1	100	74.965	Neolamprologus_brichardi
ENSMFAG00000037013	CPSF1	100	99.020	ENSNLEG00000010633	-	100	99.020	Nomascus_leucogenys
ENSMFAG00000037013	CPSF1	84	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSMFAG00000037013	CPSF1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSMFAG00000037013	CPSF1	100	96.671	ENSODEG00000013995	CPSF1	100	96.671	Octodon_degus
ENSMFAG00000037013	CPSF1	100	79.723	ENSONIG00000007676	cpsf1	100	79.516	Oreochromis_niloticus
ENSMFAG00000037013	CPSF1	58	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSMFAG00000037013	CPSF1	99	78.806	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSMFAG00000037013	CPSF1	99	79.104	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSMFAG00000037013	CPSF1	99	79.104	ENSORLG00015009979	cpsf1	100	77.498	Oryzias_latipes_hsok
ENSMFAG00000037013	CPSF1	99	79.104	ENSOMEG00000011849	cpsf1	100	77.400	Oryzias_melastigma
ENSMFAG00000037013	CPSF1	100	97.434	ENSOGAG00000000315	CPSF1	100	97.434	Otolemur_garnettii
ENSMFAG00000037013	CPSF1	53	84.462	ENSOARG00000013594	-	89	92.063	Ovis_aries
ENSMFAG00000037013	CPSF1	100	99.376	ENSPPAG00000019280	CPSF1	100	99.376	Pan_paniscus
ENSMFAG00000037013	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSMFAG00000037013	CPSF1	100	99.376	ENSPTRG00000049288	-	100	99.376	Pan_troglodytes
ENSMFAG00000037013	CPSF1	100	99.020	ENSPTRG00000051253	-	100	99.020	Pan_troglodytes
ENSMFAG00000037013	CPSF1	100	99.510	ENSPANG00000015005	CPSF1	100	99.857	Papio_anubis
ENSMFAG00000037013	CPSF1	100	81.481	ENSPKIG00000002582	cpsf1	100	80.895	Paramormyrops_kingsleyae
ENSMFAG00000037013	CPSF1	100	75.926	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSMFAG00000037013	CPSF1	99	94.063	ENSPCIG00000009035	CPSF1	100	92.828	Phascolarctos_cinereus
ENSMFAG00000037013	CPSF1	99	77.910	ENSPFOG00000012870	cpsf1	100	76.252	Poecilia_formosa
ENSMFAG00000037013	CPSF1	99	77.612	ENSPREG00000016307	cpsf1	100	75.997	Poecilia_reticulata
ENSMFAG00000037013	CPSF1	93	99.636	ENSPPYG00000018973	CPSF1	100	90.985	Pongo_abelii
ENSMFAG00000037013	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSMFAG00000037013	CPSF1	99	97.910	ENSPCOG00000020001	CPSF1	100	95.098	Propithecus_coquereli
ENSMFAG00000037013	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSMFAG00000037013	CPSF1	100	79.167	ENSPNYG00000004906	cpsf1	100	78.210	Pundamilia_nyererei
ENSMFAG00000037013	CPSF1	99	79.701	ENSPNAG00000024395	cpsf1	100	75.276	Pygocentrus_nattereri
ENSMFAG00000037013	CPSF1	99	97.910	ENSRNOG00000030705	Cpsf1	100	96.463	Rattus_norvegicus
ENSMFAG00000037013	CPSF1	100	99.723	ENSRBIG00000044907	CPSF1	100	99.723	Rhinopithecus_bieti
ENSMFAG00000037013	CPSF1	100	99.653	ENSRROG00000044861	CPSF1	100	99.653	Rhinopithecus_roxellana
ENSMFAG00000037013	CPSF1	97	98.637	ENSSBOG00000027177	CPSF1	100	98.637	Saimiri_boliviensis_boliviensis
ENSMFAG00000037013	CPSF1	100	92.552	ENSSHAG00000006500	CPSF1	100	92.552	Sarcophilus_harrisii
ENSMFAG00000037013	CPSF1	100	81.944	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSMFAG00000037013	CPSF1	100	80.556	ENSSMAG00000020547	cpsf1	100	77.808	Scophthalmus_maximus
ENSMFAG00000037013	CPSF1	100	80.093	ENSSDUG00000001100	cpsf1	100	79.129	Seriola_dumerili
ENSMFAG00000037013	CPSF1	100	80.093	ENSSLDG00000003619	cpsf1	100	79.184	Seriola_lalandi_dorsalis
ENSMFAG00000037013	CPSF1	89	100.000	ENSSARG00000003643	CPSF1	92	100.000	Sorex_araneus
ENSMFAG00000037013	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSMFAG00000037013	CPSF1	100	80.093	ENSSPAG00000005349	cpsf1	100	78.026	Stegastes_partitus
ENSMFAG00000037013	CPSF1	99	96.966	ENSSSCG00000005906	CPSF1	100	95.779	Sus_scrofa
ENSMFAG00000037013	CPSF1	94	83.154	ENSTRUG00000013134	cpsf1	99	77.692	Takifugu_rubripes
ENSMFAG00000037013	CPSF1	100	78.625	ENSTNIG00000014027	cpsf1	100	78.419	Tetraodon_nigroviridis
ENSMFAG00000037013	CPSF1	77	88.966	ENSTBEG00000001756	CPSF1	91	88.966	Tupaia_belangeri
ENSMFAG00000037013	CPSF1	100	88.426	ENSTTRG00000001937	CPSF1	90	96.546	Tursiops_truncatus
ENSMFAG00000037013	CPSF1	97	96.497	ENSUAMG00000006476	CPSF1	98	96.497	Ursus_americanus
ENSMFAG00000037013	CPSF1	67	54.967	ENSVPAG00000000157	-	50	93.939	Vicugna_pacos
ENSMFAG00000037013	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSMFAG00000037013	CPSF1	100	77.524	ENSXCOG00000003608	cpsf1	100	77.317	Xiphophorus_couchianus
ENSMFAG00000037013	CPSF1	100	77.003	ENSXMAG00000005798	cpsf1	100	76.934	Xiphophorus_maculatus