EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000037235 (Gene tree)
Gene ID: 102121977
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chr17:90705393-90708128
Accession: 102121977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000001879	RNA_ligase	PF09414.10	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000000426	LIG4-201	2736	XM_005586220	ENSMFAP00000001879	911 (aa)	XP_005586277	A0A2K5TPB9

Gene Model

Click here to download ENSMFAG00000037235's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000037235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000037235	LIG4	100	97.366	ENSG00000174405	LIG4	100	97.512	Homo_sapiens
ENSMFAG00000037235	LIG4	99	64.978	ENSAPOG00000000866	lig4	99	65.198	Acanthochromis_polyacanthus
ENSMFAG00000037235	LIG4	100	89.023	ENSAMEG00000019685	LIG4	99	89.023	Ailuropoda_melanoleuca
ENSMFAG00000037235	LIG4	99	66.297	ENSACIG00000018309	lig4	98	66.519	Amphilophus_citrinellus
ENSMFAG00000037235	LIG4	99	65.088	ENSAOCG00000011768	lig4	99	65.308	Amphiprion_ocellaris
ENSMFAG00000037235	LIG4	99	65.198	ENSAPEG00000017815	lig4	99	65.419	Amphiprion_percula
ENSMFAG00000037235	LIG4	99	65.275	ENSATEG00000005583	lig4	99	65.385	Anabas_testudineus
ENSMFAG00000037235	LIG4	97	75.341	ENSAPLG00000001673	LIG4	99	75.341	Anas_platyrhynchos
ENSMFAG00000037235	LIG4	99	76.101	ENSACAG00000014566	LIG4	99	76.101	Anolis_carolinensis
ENSMFAG00000037235	LIG4	100	95.719	ENSANAG00000012446	LIG4	100	95.719	Aotus_nancymaae
ENSMFAG00000037235	LIG4	99	65.632	ENSACLG00000027051	lig4	98	65.632	Astatotilapia_calliptera
ENSMFAG00000037235	LIG4	99	64.751	ENSAMXG00000008192	lig4	93	64.751	Astyanax_mexicanus
ENSMFAG00000037235	LIG4	100	88.474	ENSBTAG00000015868	LIG4	100	88.474	Bos_taurus
ENSMFAG00000037235	LIG4	100	95.280	ENSCJAG00000014689	LIG4	100	95.280	Callithrix_jacchus
ENSMFAG00000037235	LIG4	100	90.450	ENSCAFG00000006031	LIG4	100	90.450	Canis_familiaris
ENSMFAG00000037235	LIG4	100	90.450	ENSCAFG00020021230	LIG4	100	90.450	Canis_lupus_dingo
ENSMFAG00000037235	LIG4	100	88.255	ENSCHIG00000001019	LIG4	100	88.255	Capra_hircus
ENSMFAG00000037235	LIG4	99	87.597	ENSCAPG00000006284	LIG4	99	87.597	Cavia_aperea
ENSMFAG00000037235	LIG4	100	87.486	ENSCPOG00000014266	LIG4	100	87.486	Cavia_porcellus
ENSMFAG00000037235	LIG4	100	94.841	ENSCCAG00000019971	LIG4	100	94.841	Cebus_capucinus
ENSMFAG00000037235	LIG4	100	99.341	ENSCATG00000021075	LIG4	100	99.341	Cercocebus_atys
ENSMFAG00000037235	LIG4	100	88.804	ENSCLAG00000003376	LIG4	100	88.804	Chinchilla_lanigera
ENSMFAG00000037235	LIG4	100	99.451	ENSCSAG00000000211	LIG4	100	99.451	Chlorocebus_sabaeus
ENSMFAG00000037235	LIG4	99	79.581	ENSCPBG00000023291	LIG4	100	79.085	Chrysemys_picta_bellii
ENSMFAG00000037235	LIG4	68	45.151	ENSCING00000009536	-	95	45.151	Ciona_intestinalis
ENSMFAG00000037235	LIG4	83	45.072	ENSCSAVG00000010336	-	98	45.072	Ciona_savignyi
ENSMFAG00000037235	LIG4	100	99.232	ENSCANG00000005805	LIG4	100	99.232	Colobus_angolensis_palliatus
ENSMFAG00000037235	LIG4	100	86.623	ENSCGRG00001012072	Lig4	100	86.623	Cricetulus_griseus_chok1gshd
ENSMFAG00000037235	LIG4	100	86.623	ENSCGRG00000013417	Lig4	100	86.623	Cricetulus_griseus_crigri
ENSMFAG00000037235	LIG4	97	66.818	ENSCSEG00000013905	lig4	95	66.818	Cynoglossus_semilaevis
ENSMFAG00000037235	LIG4	99	66.154	ENSCVAG00000007896	lig4	99	66.154	Cyprinodon_variegatus
ENSMFAG00000037235	LIG4	99	64.673	ENSDARG00000060620	lig4	98	64.673	Danio_rerio
ENSMFAG00000037235	LIG4	100	90.022	ENSDNOG00000000513	LIG4	100	90.022	Dasypus_novemcinctus
ENSMFAG00000037235	LIG4	100	89.352	ENSDORG00000027303	Lig4	100	89.352	Dipodomys_ordii
ENSMFAG00000037235	LIG4	89	30.994	FBgn0030506	Lig4	91	30.994	Drosophila_melanogaster
ENSMFAG00000037235	LIG4	99	84.479	ENSETEG00000015563	LIG4	100	84.812	Echinops_telfairi
ENSMFAG00000037235	LIG4	99	43.323	ENSEBUG00000014243	lig4	99	43.323	Eptatretus_burgeri
ENSMFAG00000037235	LIG4	100	91.218	ENSEASG00005022073	LIG4	100	91.218	Equus_asinus_asinus
ENSMFAG00000037235	LIG4	100	90.670	ENSECAG00000003257	LIG4	100	90.670	Equus_caballus
ENSMFAG00000037235	LIG4	99	66.924	ENSELUG00000006787	lig4	99	67.034	Esox_lucius
ENSMFAG00000037235	LIG4	100	89.572	ENSFCAG00000031985	LIG4	100	89.572	Felis_catus
ENSMFAG00000037235	LIG4	89	75.523	ENSFALG00000004214	LIG4	98	75.523	Ficedula_albicollis
ENSMFAG00000037235	LIG4	100	89.352	ENSFDAG00000008973	LIG4	100	89.352	Fukomys_damarensis
ENSMFAG00000037235	LIG4	99	65.338	ENSFHEG00000007398	lig4	89	65.338	Fundulus_heteroclitus
ENSMFAG00000037235	LIG4	85	64.442	ENSGMOG00000012843	lig4	99	64.442	Gadus_morhua
ENSMFAG00000037235	LIG4	100	75.000	ENSGALG00000016854	LIG4	100	75.000	Gallus_gallus
ENSMFAG00000037235	LIG4	99	65.702	ENSGAFG00000019779	lig4	95	65.604	Gambusia_affinis
ENSMFAG00000037235	LIG4	99	63.123	ENSGACG00000014135	lig4	99	63.344	Gasterosteus_aculeatus
ENSMFAG00000037235	LIG4	100	97.695	ENSGGOG00000027771	LIG4	100	97.695	Gorilla_gorilla
ENSMFAG00000037235	LIG4	99	65.410	ENSHBUG00000006245	lig4	98	65.410	Haplochromis_burtoni
ENSMFAG00000037235	LIG4	100	89.572	ENSHGLG00000000718	LIG4	100	89.572	Heterocephalus_glaber_female
ENSMFAG00000037235	LIG4	100	89.572	ENSHGLG00100003265	LIG4	100	89.572	Heterocephalus_glaber_male
ENSMFAG00000037235	LIG4	99	64.066	ENSHCOG00000012010	lig4	99	64.066	Hippocampus_comes
ENSMFAG00000037235	LIG4	100	64.885	ENSIPUG00000013748	lig4	100	64.885	Ictalurus_punctatus
ENSMFAG00000037235	LIG4	100	89.682	ENSSTOG00000024303	LIG4	100	89.682	Ictidomys_tridecemlineatus
ENSMFAG00000037235	LIG4	100	87.925	ENSJJAG00000006750	Lig4	100	87.925	Jaculus_jaculus
ENSMFAG00000037235	LIG4	99	65.338	ENSKMAG00000001149	lig4	99	65.338	Kryptolebias_marmoratus
ENSMFAG00000037235	LIG4	91	65.745	ENSLBEG00000014578	lig4	100	65.986	Labrus_bergylta
ENSMFAG00000037235	LIG4	99	72.456	ENSLACG00000003282	LIG4	99	72.456	Latimeria_chalumnae
ENSMFAG00000037235	LIG4	99	70.395	ENSLOCG00000008901	lig4	98	70.395	Lepisosteus_oculatus
ENSMFAG00000037235	LIG4	100	87.952	ENSLAFG00000031152	LIG4	100	87.952	Loxodonta_africana
ENSMFAG00000037235	LIG4	100	99.780	ENSMMUG00000008874	LIG4	100	99.780	Macaca_mulatta
ENSMFAG00000037235	LIG4	100	100.000	ENSMNEG00000023575	LIG4	100	100.000	Macaca_nemestrina
ENSMFAG00000037235	LIG4	100	99.232	ENSMLEG00000026720	LIG4	100	99.232	Mandrillus_leucophaeus
ENSMFAG00000037235	LIG4	99	65.824	ENSMAMG00000008472	lig4	99	66.044	Mastacembelus_armatus
ENSMFAG00000037235	LIG4	99	65.632	ENSMZEG00005001855	lig4	98	65.632	Maylandia_zebra
ENSMFAG00000037235	LIG4	100	75.437	ENSMGAG00000015532	LIG4	100	75.437	Meleagris_gallopavo
ENSMFAG00000037235	LIG4	100	84.632	ENSMOCG00000019000	Lig4	100	84.632	Microtus_ochrogaster
ENSMFAG00000037235	LIG4	99	65.227	ENSMMOG00000004390	lig4	99	65.227	Mola_mola
ENSMFAG00000037235	LIG4	100	83.644	ENSMODG00000025064	LIG4	100	84.101	Monodelphis_domestica
ENSMFAG00000037235	LIG4	99	65.708	ENSMALG00000008555	lig4	99	65.708	Monopterus_albus
ENSMFAG00000037235	LIG4	100	86.389	MGP_CAROLIEiJ_G0030809	Lig4	100	86.389	Mus_caroli
ENSMFAG00000037235	LIG4	100	86.389	ENSMUSG00000049717	Lig4	100	86.389	Mus_musculus
ENSMFAG00000037235	LIG4	100	86.279	MGP_PahariEiJ_G0021270	Lig4	100	86.279	Mus_pahari
ENSMFAG00000037235	LIG4	100	86.389	MGP_SPRETEiJ_G0031917	Lig4	100	86.389	Mus_spretus
ENSMFAG00000037235	LIG4	100	88.255	ENSMPUG00000018675	LIG4	100	88.255	Mustela_putorius_furo
ENSMFAG00000037235	LIG4	100	90.779	ENSMLUG00000001267	LIG4	100	90.779	Myotis_lucifugus
ENSMFAG00000037235	LIG4	100	86.937	ENSNGAG00000013258	Lig4	100	86.937	Nannospalax_galili
ENSMFAG00000037235	LIG4	99	65.787	ENSNBRG00000021252	lig4	99	65.787	Neolamprologus_brichardi
ENSMFAG00000037235	LIG4	100	96.707	ENSNLEG00000007888	LIG4	100	96.707	Nomascus_leucogenys
ENSMFAG00000037235	LIG4	100	88.145	ENSOPRG00000005765	LIG4	100	88.145	Ochotona_princeps
ENSMFAG00000037235	LIG4	100	87.377	ENSODEG00000019683	LIG4	100	87.377	Octodon_degus
ENSMFAG00000037235	LIG4	99	65.670	ENSONIG00000011969	lig4	97	65.891	Oreochromis_niloticus
ENSMFAG00000037235	LIG4	100	91.109	ENSOCUG00000015734	LIG4	100	91.109	Oryctolagus_cuniculus
ENSMFAG00000037235	LIG4	99	64.066	ENSORLG00000004041	lig4	99	64.066	Oryzias_latipes
ENSMFAG00000037235	LIG4	99	64.505	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSMFAG00000037235	LIG4	99	64.176	ENSORLG00015017754	lig4	99	64.176	Oryzias_latipes_hsok
ENSMFAG00000037235	LIG4	75	69.853	ENSOMEG00000003459	lig4	99	69.853	Oryzias_melastigma
ENSMFAG00000037235	LIG4	100	91.776	ENSOGAG00000032120	LIG4	99	91.776	Otolemur_garnettii
ENSMFAG00000037235	LIG4	82	90.067	ENSOARG00000005590	LIG4	98	90.067	Ovis_aries
ENSMFAG00000037235	LIG4	100	96.926	ENSPPAG00000032998	LIG4	100	96.926	Pan_paniscus
ENSMFAG00000037235	LIG4	100	89.901	ENSPPRG00000017804	LIG4	100	89.901	Panthera_pardus
ENSMFAG00000037235	LIG4	100	89.791	ENSPTIG00000010051	LIG4	100	89.791	Panthera_tigris_altaica
ENSMFAG00000037235	LIG4	100	97.036	ENSPTRG00000006025	LIG4	100	97.036	Pan_troglodytes
ENSMFAG00000037235	LIG4	100	99.451	ENSPANG00000007562	LIG4	100	99.451	Papio_anubis
ENSMFAG00000037235	LIG4	99	66.703	ENSPKIG00000011645	lig4	98	66.703	Paramormyrops_kingsleyae
ENSMFAG00000037235	LIG4	100	79.039	ENSPSIG00000001504	LIG4	100	79.039	Pelodiscus_sinensis
ENSMFAG00000037235	LIG4	99	63.556	ENSPMGG00000013486	lig4	99	63.117	Periophthalmus_magnuspinnatus
ENSMFAG00000037235	LIG4	100	86.842	ENSPEMG00000000076	Lig4	100	86.842	Peromyscus_maniculatus_bairdii
ENSMFAG00000037235	LIG4	100	83.662	ENSPCIG00000021882	LIG4	100	83.662	Phascolarctos_cinereus
ENSMFAG00000037235	LIG4	99	65.851	ENSPFOG00000000797	lig4	99	65.604	Poecilia_formosa
ENSMFAG00000037235	LIG4	99	65.740	ENSPLAG00000001196	lig4	99	65.495	Poecilia_latipinna
ENSMFAG00000037235	LIG4	99	65.851	ENSPMEG00000021353	lig4	99	65.714	Poecilia_mexicana
ENSMFAG00000037235	LIG4	99	65.628	ENSPREG00000007323	lig4	99	65.275	Poecilia_reticulata
ENSMFAG00000037235	LIG4	100	97.585	ENSPPYG00000005540	LIG4	100	97.585	Pongo_abelii
ENSMFAG00000037235	LIG4	100	90.670	ENSPVAG00000016403	LIG4	100	90.670	Pteropus_vampyrus
ENSMFAG00000037235	LIG4	99	65.521	ENSPNYG00000009660	lig4	98	65.521	Pundamilia_nyererei
ENSMFAG00000037235	LIG4	100	64.693	ENSPNAG00000028069	LIG4	100	64.693	Pygocentrus_nattereri
ENSMFAG00000037235	LIG4	100	64.693	ENSPNAG00000028056	lig4	100	64.693	Pygocentrus_nattereri
ENSMFAG00000037235	LIG4	100	85.401	ENSRNOG00000014605	Lig4	100	85.401	Rattus_norvegicus
ENSMFAG00000037235	LIG4	100	97.695	ENSRBIG00000039962	LIG4	100	97.695	Rhinopithecus_bieti
ENSMFAG00000037235	LIG4	100	98.683	ENSRROG00000006040	LIG4	100	98.683	Rhinopithecus_roxellana
ENSMFAG00000037235	LIG4	100	94.621	ENSSBOG00000019029	LIG4	100	94.621	Saimiri_boliviensis_boliviensis
ENSMFAG00000037235	LIG4	100	80.132	ENSSHAG00000009525	LIG4	100	80.702	Sarcophilus_harrisii
ENSMFAG00000037235	LIG4	100	66.157	ENSSFOG00015012835	lig4	100	66.157	Scleropages_formosus
ENSMFAG00000037235	LIG4	99	63.455	ENSSMAG00000011267	lig4	99	63.455	Scophthalmus_maximus
ENSMFAG00000037235	LIG4	99	66.630	ENSSDUG00000010343	lig4	98	66.630	Seriola_dumerili
ENSMFAG00000037235	LIG4	99	64.784	ENSSLDG00000003239	lig4	99	64.784	Seriola_lalandi_dorsalis
ENSMFAG00000037235	LIG4	100	83.370	ENSSARG00000006573	LIG4	100	83.370	Sorex_araneus
ENSMFAG00000037235	LIG4	93	78.081	ENSSPUG00000002444	LIG4	100	78.081	Sphenodon_punctatus
ENSMFAG00000037235	LIG4	99	65.461	ENSSPAG00000001609	lig4	99	65.461	Stegastes_partitus
ENSMFAG00000037235	LIG4	100	88.255	ENSSSCG00000009540	LIG4	100	88.255	Sus_scrofa
ENSMFAG00000037235	LIG4	99	74.835	ENSTGUG00000010795	LIG4	100	74.835	Taeniopygia_guttata
ENSMFAG00000037235	LIG4	99	65.495	ENSTRUG00000009984	lig4	99	65.495	Takifugu_rubripes
ENSMFAG00000037235	LIG4	99	65.559	ENSTNIG00000010348	lig4	99	65.781	Tetraodon_nigroviridis
ENSMFAG00000037235	LIG4	100	90.889	ENSTBEG00000017741	LIG4	100	90.889	Tupaia_belangeri
ENSMFAG00000037235	LIG4	100	89.243	ENSTTRG00000012660	LIG4	100	89.243	Tursiops_truncatus
ENSMFAG00000037235	LIG4	100	89.133	ENSUAMG00000003773	LIG4	100	89.133	Ursus_americanus
ENSMFAG00000037235	LIG4	99	72.357	ENSXETG00000002654	lig4	99	72.357	Xenopus_tropicalis
ENSMFAG00000037235	LIG4	99	65.628	ENSXCOG00000017401	lig4	99	65.165	Xiphophorus_couchianus
ENSMFAG00000037235	LIG4	99	65.889	ENSXMAG00000015142	lig4	99	65.423	Xiphophorus_maculatus