EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000039168 (Gene tree)
Gene ID: 102125950
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 6350 bases
Position: chr3:46812236-46818585
Accession: 102125950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000043543	RNA_pol_L_2	PF13656.6	6.3e-29	1	1
ENSMFAP00000043529	RNA_pol_L_2	PF13656.6	7.6e-29	1	1
ENSMFAP00000043552	RNA_pol_L_2	PF13656.6	1.1e-28	1	1
ENSMFAP00000043546	RNA_pol_L_2	PF13656.6	3.6e-18	1	1
ENSMFAP00000043529	RNA_pol_L	PF01193.24	4.6e-10	1	1
ENSMFAP00000043543	RNA_pol_L	PF01193.24	7e-10	1	1
ENSMFAP00000043552	RNA_pol_L	PF01193.24	1.1e-09	1	1
ENSMFAP00000043546	RNA_pol_L	PF01193.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000017842	-	477	XM_005549316	ENSMFAP00000043552	158 (aa)	XP_005549373	G7P155
ENSMFAT00000017819	-	339	-	ENSMFAP00000043529	112 (aa)	-	A0A2K5X216
ENSMFAT00000017833	-	393	XM_005549315	ENSMFAP00000043543	130 (aa)	XP_005549372	A0A2K5X258
ENSMFAT00000017836	-	264	-	ENSMFAP00000043546	87 (aa)	-	A0A2K5X244

Gene Model

Click here to download ENSMFAG00000039168's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03020	RNA polymerase	KEGG
mcf05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000039168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000039168	-	76	35.227	ENSMFAG00000045264	POLR1D	75	32.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000039168	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSMFAG00000039168	-	92	100.000	ENSBTAG00000005446	POLR2J	91	99.065	Bos_taurus
ENSMFAG00000039168	-	100	92.241	ENSCAFG00020013154	-	91	99.065	Canis_lupus_dingo
ENSMFAG00000039168	-	92	100.000	ENSCHIG00000009008	-	91	99.065	Capra_hircus
ENSMFAG00000039168	-	82	98.592	ENSCAPG00000013625	-	96	82.400	Cavia_aperea
ENSMFAG00000039168	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSMFAG00000039168	-	68	100.000	ENSCHOG00000008325	-	100	77.477	Choloepus_hoffmanni
ENSMFAG00000039168	-	82	98.592	ENSCPBG00000027774	-	82	91.837	Chrysemys_picta_bellii
ENSMFAG00000039168	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSMFAG00000039168	-	90	90.845	ENSGGOG00000038950	-	82	90.845	Gorilla_gorilla
ENSMFAG00000039168	-	94	76.829	ENSGGOG00000043186	-	100	67.089	Gorilla_gorilla
ENSMFAG00000039168	-	79	85.915	ENSGGOG00000003934	-	90	88.288	Gorilla_gorilla
ENSMFAG00000039168	-	69	95.000	ENSLACG00000022567	-	64	89.552	Latimeria_chalumnae
ENSMFAG00000039168	-	100	98.742	ENSMLEG00000033262	-	100	98.742	Mandrillus_leucophaeus
ENSMFAG00000039168	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSMFAG00000039168	-	97	76.190	ENSPTRG00000028611	-	98	78.030	Pan_troglodytes
ENSMFAG00000039168	-	90	75.352	ENSPTRG00000052689	-	95	75.352	Pan_troglodytes
ENSMFAG00000039168	-	100	76.101	ENSPTRG00000050290	-	100	76.101	Pan_troglodytes
ENSMFAG00000039168	-	100	93.082	ENSPTRG00000019132	-	100	93.082	Pan_troglodytes
ENSMFAG00000039168	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSMFAG00000039168	-	92	96.117	ENSPKIG00000013014	-	98	89.565	Paramormyrops_kingsleyae
ENSMFAG00000039168	-	92	100.000	ENSPCAG00000003269	-	83	81.208	Procavia_capensis
ENSMFAG00000039168	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSMFAG00000039168	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000039168	-	83	93.548	ENSTTRG00000014846	-	100	82.270	Tursiops_truncatus
ENSMFAG00000039168	-	92	72.816	ENSVPAG00000007077	-	77	65.926	Vicugna_pacos
ENSMFAG00000039168	-	92	100.000	ENSVVUG00000023727	-	91	99.065	Vulpes_vulpes