EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000039397 (Gene tree)
Gene ID: 102136784
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 17610 bases
Position: chr15:24285003-24302612
Accession: 102136784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000044084	PRP4	PF08799.11	7.7e-14	1	1
ENSMFAP00000044100	PRP4	PF08799.11	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000018376	PRPF4-201	2926	XM_005581032	ENSMFAP00000044084	521 (aa)	XP_005581089	A0A2K5X3L9
ENSMFAT00000018392	PRPF4-202	1632	-	ENSMFAP00000044100	543 (aa)	-	A0A2K5X3V9

Gene Model

Click here to download ENSMFAG00000039397's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000039397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000039397	PRPF4	56	33.898	ENSMFAG00000043490	POC1B	63	33.898
ENSMFAG00000039397	PRPF4	56	31.111	ENSMFAG00000001970	POC1A	70	31.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000039397	PRPF4	100	99.040	ENSG00000136875	PRPF4	100	99.040	Homo_sapiens
ENSMFAG00000039397	PRPF4	96	77.197	ENSAPOG00000014132	prpf4	98	77.197	Acanthochromis_polyacanthus
ENSMFAG00000039397	PRPF4	100	99.232	ENSAMEG00000013048	PRPF4	100	98.315	Ailuropoda_melanoleuca
ENSMFAG00000039397	PRPF4	96	76.984	ENSACIG00000005579	prpf4	99	76.984	Amphilophus_citrinellus
ENSMFAG00000039397	PRPF4	96	76.634	ENSAOCG00000005457	prpf4	99	76.634	Amphiprion_ocellaris
ENSMFAG00000039397	PRPF4	96	76.436	ENSAPEG00000000776	prpf4	99	76.436	Amphiprion_percula
ENSMFAG00000039397	PRPF4	96	76.389	ENSATEG00000023013	prpf4	99	76.389	Anabas_testudineus
ENSMFAG00000039397	PRPF4	100	89.060	ENSAPLG00000006534	PRPF4	98	88.762	Anas_platyrhynchos
ENSMFAG00000039397	PRPF4	100	89.675	ENSACAG00000015110	PRPF4	100	88.719	Anolis_carolinensis
ENSMFAG00000039397	PRPF4	100	99.424	ENSANAG00000022464	PRPF4	100	97.790	Aotus_nancymaae
ENSMFAG00000039397	PRPF4	96	76.786	ENSACLG00000019031	prpf4	99	76.786	Astatotilapia_calliptera
ENSMFAG00000039397	PRPF4	97	62.188	ENSAMXG00000006756	prpf4	99	73.267	Astyanax_mexicanus
ENSMFAG00000039397	PRPF4	100	98.656	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSMFAG00000039397	PRPF4	90	43.882	WBGene00007972	prp-4	96	43.789	Caenorhabditis_elegans
ENSMFAG00000039397	PRPF4	100	99.234	ENSCJAG00000017856	PRPF4	100	99.234	Callithrix_jacchus
ENSMFAG00000039397	PRPF4	100	99.232	ENSCAFG00000003224	PRPF4	99	98.505	Canis_familiaris
ENSMFAG00000039397	PRPF4	100	99.232	ENSCAFG00020022637	PRPF4	100	99.232	Canis_lupus_dingo
ENSMFAG00000039397	PRPF4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSMFAG00000039397	PRPF4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSMFAG00000039397	PRPF4	88	88.305	ENSCAPG00000008935	PRPF4	97	88.305	Cavia_aperea
ENSMFAG00000039397	PRPF4	100	98.656	ENSCPOG00000010747	-	100	98.656	Cavia_porcellus
ENSMFAG00000039397	PRPF4	100	92.131	ENSCPOG00000014729	-	100	92.131	Cavia_porcellus
ENSMFAG00000039397	PRPF4	100	99.232	ENSCCAG00000028990	PRPF4	100	99.232	Cebus_capucinus
ENSMFAG00000039397	PRPF4	100	99.808	ENSCATG00000021552	PRPF4	100	99.808	Cercocebus_atys
ENSMFAG00000039397	PRPF4	100	98.848	ENSCLAG00000013448	PRPF4	100	98.848	Chinchilla_lanigera
ENSMFAG00000039397	PRPF4	87	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSMFAG00000039397	PRPF4	99	91.262	ENSCPBG00000019136	PRPF4	73	92.079	Chrysemys_picta_bellii
ENSMFAG00000039397	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSMFAG00000039397	PRPF4	96	57.341	ENSCSAVG00000009178	-	99	58.658	Ciona_savignyi
ENSMFAG00000039397	PRPF4	100	99.616	ENSCANG00000003246	PRPF4	100	99.616	Colobus_angolensis_palliatus
ENSMFAG00000039397	PRPF4	100	99.040	ENSCGRG00001016992	Prpf4	100	99.040	Cricetulus_griseus_chok1gshd
ENSMFAG00000039397	PRPF4	100	99.040	ENSCGRG00000017560	Prpf4	100	99.040	Cricetulus_griseus_crigri
ENSMFAG00000039397	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSMFAG00000039397	PRPF4	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSMFAG00000039397	PRPF4	100	98.659	ENSDNOG00000013203	PRPF4	100	98.659	Dasypus_novemcinctus
ENSMFAG00000039397	PRPF4	100	99.040	ENSDORG00000026275	Prpf4	100	99.040	Dipodomys_ordii
ENSMFAG00000039397	PRPF4	87	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSMFAG00000039397	PRPF4	100	97.132	ENSETEG00000020389	PRPF4	100	97.132	Echinops_telfairi
ENSMFAG00000039397	PRPF4	95	72.811	ENSEBUG00000015229	prpf4	86	73.272	Eptatretus_burgeri
ENSMFAG00000039397	PRPF4	100	99.424	ENSEASG00005022678	PRPF4	100	99.424	Equus_asinus_asinus
ENSMFAG00000039397	PRPF4	100	99.424	ENSECAG00000007072	PRPF4	100	99.424	Equus_caballus
ENSMFAG00000039397	PRPF4	100	77.948	ENSEEUG00000007480	PRPF4	100	77.948	Erinaceus_europaeus
ENSMFAG00000039397	PRPF4	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSMFAG00000039397	PRPF4	100	99.234	ENSFCAG00000005514	PRPF4	100	99.234	Felis_catus
ENSMFAG00000039397	PRPF4	98	87.892	ENSFALG00000005423	PRPF4	85	89.245	Ficedula_albicollis
ENSMFAG00000039397	PRPF4	100	98.656	ENSFDAG00000005839	PRPF4	100	98.656	Fukomys_damarensis
ENSMFAG00000039397	PRPF4	96	75.992	ENSFHEG00000001300	prpf4	99	75.992	Fundulus_heteroclitus
ENSMFAG00000039397	PRPF4	98	90.020	ENSGALG00000008857	PRPF4	93	91.218	Gallus_gallus
ENSMFAG00000039397	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	66	73.602	Gambusia_affinis
ENSMFAG00000039397	PRPF4	96	69.444	ENSGACG00000015476	prpf4	99	68.651	Gasterosteus_aculeatus
ENSMFAG00000039397	PRPF4	99	91.068	ENSGAGG00000025029	PRPF4	94	91.881	Gopherus_agassizii
ENSMFAG00000039397	PRPF4	100	99.040	ENSGGOG00000006943	PRPF4	100	99.040	Gorilla_gorilla
ENSMFAG00000039397	PRPF4	96	76.587	ENSHBUG00000000562	prpf4	99	76.587	Haplochromis_burtoni
ENSMFAG00000039397	PRPF4	100	81.644	ENSHGLG00000016628	-	100	82.409	Heterocephalus_glaber_female
ENSMFAG00000039397	PRPF4	100	98.656	ENSHGLG00000015191	PRPF4	100	98.656	Heterocephalus_glaber_female
ENSMFAG00000039397	PRPF4	100	80.230	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSMFAG00000039397	PRPF4	100	80.230	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSMFAG00000039397	PRPF4	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSMFAG00000039397	PRPF4	100	98.848	ENSSTOG00000027833	PRPF4	100	98.848	Ictidomys_tridecemlineatus
ENSMFAG00000039397	PRPF4	100	99.040	ENSJJAG00000008838	Prpf4	100	99.040	Jaculus_jaculus
ENSMFAG00000039397	PRPF4	96	75.992	ENSKMAG00000013236	prpf4	99	75.992	Kryptolebias_marmoratus
ENSMFAG00000039397	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSMFAG00000039397	PRPF4	99	80.154	ENSLACG00000016317	PRPF4	97	81.460	Latimeria_chalumnae
ENSMFAG00000039397	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSMFAG00000039397	PRPF4	100	98.659	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSMFAG00000039397	PRPF4	100	99.808	ENSMMUG00000005844	PRPF4	100	99.808	Macaca_mulatta
ENSMFAG00000039397	PRPF4	100	89.251	ENSMNEG00000033737	PRPF4	100	89.251	Macaca_nemestrina
ENSMFAG00000039397	PRPF4	100	99.816	ENSMLEG00000040284	PRPF4	100	99.816	Mandrillus_leucophaeus
ENSMFAG00000039397	PRPF4	97	75.937	ENSMAMG00000020141	prpf4	99	75.937	Mastacembelus_armatus
ENSMFAG00000039397	PRPF4	96	76.786	ENSMZEG00005023205	prpf4	99	76.786	Maylandia_zebra
ENSMFAG00000039397	PRPF4	99	88.077	ENSMGAG00000001796	PRPF4	100	86.592	Meleagris_gallopavo
ENSMFAG00000039397	PRPF4	100	98.464	ENSMAUG00000018022	Prpf4	100	98.464	Mesocricetus_auratus
ENSMFAG00000039397	PRPF4	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSMFAG00000039397	PRPF4	100	98.464	ENSMOCG00000018273	Prpf4	100	98.464	Microtus_ochrogaster
ENSMFAG00000039397	PRPF4	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSMFAG00000039397	PRPF4	100	94.837	ENSMODG00000004444	-	100	94.837	Monodelphis_domestica
ENSMFAG00000039397	PRPF4	100	95.029	ENSMODG00000025096	-	99	93.470	Monodelphis_domestica
ENSMFAG00000039397	PRPF4	96	76.389	ENSMALG00000013624	prpf4	99	76.389	Monopterus_albus
ENSMFAG00000039397	PRPF4	100	98.848	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.848	Mus_caroli
ENSMFAG00000039397	PRPF4	100	98.848	ENSMUSG00000066148	Prpf4	100	98.848	Mus_musculus
ENSMFAG00000039397	PRPF4	100	98.656	MGP_PahariEiJ_G0028413	Prpf4	100	98.656	Mus_pahari
ENSMFAG00000039397	PRPF4	100	98.848	MGP_SPRETEiJ_G0027042	Prpf4	100	98.848	Mus_spretus
ENSMFAG00000039397	PRPF4	100	99.232	ENSMPUG00000007883	PRPF4	100	99.232	Mustela_putorius_furo
ENSMFAG00000039397	PRPF4	100	98.848	ENSMLUG00000015309	-	99	98.124	Myotis_lucifugus
ENSMFAG00000039397	PRPF4	100	96.929	ENSMLUG00000008626	-	99	96.226	Myotis_lucifugus
ENSMFAG00000039397	PRPF4	100	93.666	ENSNGAG00000000468	Prpf4	100	93.666	Nannospalax_galili
ENSMFAG00000039397	PRPF4	96	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSMFAG00000039397	PRPF4	100	99.424	ENSNLEG00000016647	PRPF4	100	99.424	Nomascus_leucogenys
ENSMFAG00000039397	PRPF4	99	95.136	ENSMEUG00000013256	PRPF4	98	96.047	Notamacropus_eugenii
ENSMFAG00000039397	PRPF4	100	98.467	ENSOPRG00000005302	PRPF4	100	98.467	Ochotona_princeps
ENSMFAG00000039397	PRPF4	100	99.040	ENSODEG00000018147	PRPF4	100	99.040	Octodon_degus
ENSMFAG00000039397	PRPF4	99	74.952	ENSONIG00000012671	prpf4	99	76.786	Oreochromis_niloticus
ENSMFAG00000039397	PRPF4	100	99.232	ENSOCUG00000005046	PRPF4	100	99.232	Oryctolagus_cuniculus
ENSMFAG00000039397	PRPF4	96	74.701	ENSORLG00000019641	prpf4	99	74.701	Oryzias_latipes
ENSMFAG00000039397	PRPF4	96	74.701	ENSORLG00020019438	prpf4	99	74.701	Oryzias_latipes_hni
ENSMFAG00000039397	PRPF4	96	74.526	ENSOMEG00000020941	prpf4	99	74.526	Oryzias_melastigma
ENSMFAG00000039397	PRPF4	100	94.050	ENSOGAG00000007802	PRPF4	100	92.884	Otolemur_garnettii
ENSMFAG00000039397	PRPF4	100	99.040	ENSOARG00000006319	PRPF4	100	97.606	Ovis_aries
ENSMFAG00000039397	PRPF4	100	99.040	ENSPPAG00000041797	PRPF4	100	99.040	Pan_paniscus
ENSMFAG00000039397	PRPF4	100	99.424	ENSPPRG00000014360	PRPF4	100	99.424	Panthera_pardus
ENSMFAG00000039397	PRPF4	100	99.424	ENSPTIG00000009574	PRPF4	100	99.424	Panthera_tigris_altaica
ENSMFAG00000039397	PRPF4	100	99.040	ENSPTRG00000021274	PRPF4	100	98.851	Pan_troglodytes
ENSMFAG00000039397	PRPF4	100	99.632	ENSPANG00000025776	PRPF4	100	99.632	Papio_anubis
ENSMFAG00000039397	PRPF4	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSMFAG00000039397	PRPF4	100	89.635	ENSPSIG00000010713	PRPF4	89	91.683	Pelodiscus_sinensis
ENSMFAG00000039397	PRPF4	99	58.532	ENSPMGG00000000997	prpf4	98	59.065	Periophthalmus_magnuspinnatus
ENSMFAG00000039397	PRPF4	100	99.040	ENSPEMG00000024115	Prpf4	100	99.040	Peromyscus_maniculatus_bairdii
ENSMFAG00000039397	PRPF4	99	95.136	ENSPCIG00000003821	PRPF4	98	96.047	Phascolarctos_cinereus
ENSMFAG00000039397	PRPF4	96	69.822	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSMFAG00000039397	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSMFAG00000039397	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSMFAG00000039397	PRPF4	98	99.025	ENSPCAG00000002561	PRPF4	99	99.025	Procavia_capensis
ENSMFAG00000039397	PRPF4	100	98.848	ENSPCOG00000011975	PRPF4	100	98.848	Propithecus_coquereli
ENSMFAG00000039397	PRPF4	100	95.211	ENSPVAG00000004708	PRPF4	100	94.253	Pteropus_vampyrus
ENSMFAG00000039397	PRPF4	96	76.786	ENSPNYG00000008013	prpf4	99	76.786	Pundamilia_nyererei
ENSMFAG00000039397	PRPF4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSMFAG00000039397	PRPF4	100	98.656	ENSRNOG00000014777	Prpf4	100	98.656	Rattus_norvegicus
ENSMFAG00000039397	PRPF4	100	99.616	ENSRBIG00000040221	PRPF4	100	99.616	Rhinopithecus_bieti
ENSMFAG00000039397	PRPF4	100	99.616	ENSRROG00000040240	PRPF4	100	99.616	Rhinopithecus_roxellana
ENSMFAG00000039397	PRPF4	100	95.411	ENSSHAG00000017658	PRPF4	100	95.411	Sarcophilus_harrisii
ENSMFAG00000039397	PRPF4	97	81.782	ENSSFOG00015008963	prpf4	99	81.782	Scleropages_formosus
ENSMFAG00000039397	PRPF4	96	75.397	ENSSMAG00000008889	prpf4	99	75.397	Scophthalmus_maximus
ENSMFAG00000039397	PRPF4	96	73.307	ENSSDUG00000022083	prpf4	98	73.506	Seriola_dumerili
ENSMFAG00000039397	PRPF4	96	73.506	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSMFAG00000039397	PRPF4	100	90.211	ENSSPUG00000015582	PRPF4	100	89.827	Sphenodon_punctatus
ENSMFAG00000039397	PRPF4	96	71.006	ENSSPAG00000011286	prpf4	99	71.006	Stegastes_partitus
ENSMFAG00000039397	PRPF4	100	99.424	ENSSSCG00000024648	PRPF4	100	99.424	Sus_scrofa
ENSMFAG00000039397	PRPF4	95	90.264	ENSTGUG00000002623	PRPF4	100	90.593	Taeniopygia_guttata
ENSMFAG00000039397	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSMFAG00000039397	PRPF4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSMFAG00000039397	PRPF4	100	90.230	ENSTBEG00000000821	PRPF4	100	90.230	Tupaia_belangeri
ENSMFAG00000039397	PRPF4	80	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSMFAG00000039397	PRPF4	64	96.108	ENSUAMG00000018288	PRPF4	90	96.108	Ursus_americanus
ENSMFAG00000039397	PRPF4	100	98.656	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSMFAG00000039397	PRPF4	100	98.659	ENSVPAG00000005281	PRPF4	100	98.659	Vicugna_pacos
ENSMFAG00000039397	PRPF4	100	98.095	ENSVVUG00000002476	PRPF4	100	98.225	Vulpes_vulpes
ENSMFAG00000039397	PRPF4	69	57.778	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSMFAG00000039397	PRPF4	88	64.192	ENSXMAG00000002750	prpf4	98	65.805	Xiphophorus_maculatus