EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000039903 (Gene tree)
Gene ID: 101865672
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 31828 bases
Position: chr2:2844758-2876585
Accession: 101865672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000042335	MMR_HSR1	PF01926.23	1.1e-13	1	1
ENSMFAP00000042295	MMR_HSR1	PF01926.23	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000016617	LSG1-202	1959	-	ENSMFAP00000042335	652 (aa)	-	A0A2K5WYM2
ENSMFAT00000016576	LSG1-201	3804	XM_005545342	ENSMFAP00000042295	717 (aa)	XP_005545399	A0A2K5WYI5
ENSMFAT00000016622	LSG1-203	468	-	ENSMFAP00000042340	155 (aa)	-	A0A2K5WYM5

Gene Model

Click here to download ENSMFAG00000039903's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000039903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000039903	LSG1	100	93.769	ENSG00000041802	LSG1	98	98.851	Homo_sapiens
ENSMFAG00000039903	LSG1	99	63.030	ENSAPOG00000009694	lsg1	99	65.000	Acanthochromis_polyacanthus
ENSMFAG00000039903	LSG1	99	82.094	ENSAMEG00000009343	LSG1	99	83.156	Ailuropoda_melanoleuca
ENSMFAG00000039903	LSG1	98	62.888	ENSACIG00000012406	lsg1	99	65.099	Amphilophus_citrinellus
ENSMFAG00000039903	LSG1	99	62.727	ENSAOCG00000016066	lsg1	99	64.697	Amphiprion_ocellaris
ENSMFAG00000039903	LSG1	99	63.333	ENSAPEG00000003252	lsg1	99	64.697	Amphiprion_percula
ENSMFAG00000039903	LSG1	98	64.596	ENSATEG00000011794	lsg1	99	64.992	Anabas_testudineus
ENSMFAG00000039903	LSG1	95	63.449	ENSACAG00000004222	LSG1	99	64.659	Anolis_carolinensis
ENSMFAG00000039903	LSG1	100	92.857	ENSANAG00000021153	LSG1	100	94.377	Aotus_nancymaae
ENSMFAG00000039903	LSG1	99	61.919	ENSACLG00000000520	lsg1	99	64.048	Astatotilapia_calliptera
ENSMFAG00000039903	LSG1	99	62.090	ENSAMXG00000008271	lsg1	99	63.238	Astyanax_mexicanus
ENSMFAG00000039903	LSG1	100	83.763	ENSBTAG00000008461	LSG1	100	85.584	Bos_taurus
ENSMFAG00000039903	LSG1	70	48.341	WBGene00016907	C53H9.2	94	58.065	Caenorhabditis_elegans
ENSMFAG00000039903	LSG1	100	91.945	ENSCJAG00000013962	LSG1	100	93.465	Callithrix_jacchus
ENSMFAG00000039903	LSG1	95	83.680	ENSCAFG00000013445	LSG1	99	85.280	Canis_familiaris
ENSMFAG00000039903	LSG1	99	82.451	ENSCAFG00020002216	LSG1	99	84.912	Canis_lupus_dingo
ENSMFAG00000039903	LSG1	99	82.827	ENSCHIG00000015769	LSG1	99	84.347	Capra_hircus
ENSMFAG00000039903	LSG1	100	87.253	ENSTSYG00000001447	LSG1	100	88.771	Carlito_syrichta
ENSMFAG00000039903	LSG1	95	75.637	ENSCAPG00000009856	LSG1	100	77.157	Cavia_aperea
ENSMFAG00000039903	LSG1	100	91.337	ENSCCAG00000035744	LSG1	100	92.705	Cebus_capucinus
ENSMFAG00000039903	LSG1	100	99.163	ENSCATG00000042060	LSG1	100	99.163	Cercocebus_atys
ENSMFAG00000039903	LSG1	100	98.884	ENSCSAG00000008796	LSG1	100	98.884	Chlorocebus_sabaeus
ENSMFAG00000039903	LSG1	99	68.216	ENSCPBG00000015941	LSG1	86	67.867	Chrysemys_picta_bellii
ENSMFAG00000039903	LSG1	65	62.632	ENSCING00000007079	-	91	63.158	Ciona_intestinalis
ENSMFAG00000039903	LSG1	84	48.208	ENSCSAVG00000002514	-	96	56.379	Ciona_savignyi
ENSMFAG00000039903	LSG1	100	97.853	ENSCANG00000030709	LSG1	100	97.872	Colobus_angolensis_palliatus
ENSMFAG00000039903	LSG1	100	81.212	ENSCGRG00001019846	Lsg1	100	82.576	Cricetulus_griseus_chok1gshd
ENSMFAG00000039903	LSG1	100	81.212	ENSCGRG00000014617	Lsg1	100	82.576	Cricetulus_griseus_crigri
ENSMFAG00000039903	LSG1	98	63.385	ENSCSEG00000008522	lsg1	99	63.801	Cynoglossus_semilaevis
ENSMFAG00000039903	LSG1	97	65.163	ENSCVAG00000002484	lsg1	99	67.223	Cyprinodon_variegatus
ENSMFAG00000039903	LSG1	99	66.161	ENSDARG00000015352	lsg1	99	67.678	Danio_rerio
ENSMFAG00000039903	LSG1	100	83.384	ENSDNOG00000006224	LSG1	100	84.743	Dasypus_novemcinctus
ENSMFAG00000039903	LSG1	84	55.328	FBgn0266284	Ns3	93	56.420	Drosophila_melanogaster
ENSMFAG00000039903	LSG1	89	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSMFAG00000039903	LSG1	88	56.951	ENSEBUG00000003119	lsg1	85	56.766	Eptatretus_burgeri
ENSMFAG00000039903	LSG1	100	84.674	ENSEASG00005000678	LSG1	100	86.495	Equus_asinus_asinus
ENSMFAG00000039903	LSG1	100	84.977	ENSECAG00000017659	LSG1	100	86.798	Equus_caballus
ENSMFAG00000039903	LSG1	87	81.897	ENSEEUG00000015217	LSG1	87	81.897	Erinaceus_europaeus
ENSMFAG00000039903	LSG1	99	62.236	ENSELUG00000023973	lsg1	99	62.594	Esox_lucius
ENSMFAG00000039903	LSG1	99	84.650	ENSFCAG00000024957	LSG1	99	86.018	Felis_catus
ENSMFAG00000039903	LSG1	92	65.742	ENSFALG00000007210	LSG1	94	66.884	Ficedula_albicollis
ENSMFAG00000039903	LSG1	100	77.376	ENSFDAG00000017373	LSG1	100	79.211	Fukomys_damarensis
ENSMFAG00000039903	LSG1	97	64.099	ENSFHEG00000003680	lsg1	99	64.925	Fundulus_heteroclitus
ENSMFAG00000039903	LSG1	82	69.608	ENSGMOG00000015834	lsg1	87	70.635	Gadus_morhua
ENSMFAG00000039903	LSG1	99	63.540	ENSGALG00000007058	LSG1	94	61.528	Gallus_gallus
ENSMFAG00000039903	LSG1	97	64.907	ENSGAFG00000015831	lsg1	99	65.211	Gambusia_affinis
ENSMFAG00000039903	LSG1	98	62.080	ENSGACG00000009323	lsg1	99	62.090	Gasterosteus_aculeatus
ENSMFAG00000039903	LSG1	100	95.434	ENSGGOG00000000520	LSG1	100	96.201	Gorilla_gorilla
ENSMFAG00000039903	LSG1	99	62.142	ENSHBUG00000005659	lsg1	99	63.433	Haplochromis_burtoni
ENSMFAG00000039903	LSG1	100	75.904	ENSHGLG00000017390	LSG1	100	76.923	Heterocephalus_glaber_female
ENSMFAG00000039903	LSG1	100	75.904	ENSHGLG00100018587	LSG1	100	76.923	Heterocephalus_glaber_male
ENSMFAG00000039903	LSG1	97	63.215	ENSHCOG00000016848	lsg1	99	62.742	Hippocampus_comes
ENSMFAG00000039903	LSG1	99	63.830	ENSIPUG00000008631	lsg1	99	65.653	Ictalurus_punctatus
ENSMFAG00000039903	LSG1	82	81.818	ENSSTOG00000010234	LSG1	99	81.818	Ictidomys_tridecemlineatus
ENSMFAG00000039903	LSG1	100	79.789	ENSJJAG00000015513	Lsg1	100	81.118	Jaculus_jaculus
ENSMFAG00000039903	LSG1	98	62.481	ENSKMAG00000009681	lsg1	99	63.374	Kryptolebias_marmoratus
ENSMFAG00000039903	LSG1	98	61.025	ENSLBEG00000024261	lsg1	99	62.557	Labrus_bergylta
ENSMFAG00000039903	LSG1	99	64.521	ENSLACG00000013399	LSG1	99	65.719	Latimeria_chalumnae
ENSMFAG00000039903	LSG1	98	65.688	ENSLOCG00000004918	lsg1	99	66.415	Lepisosteus_oculatus
ENSMFAG00000039903	LSG1	100	82.853	ENSLAFG00000012919	-	100	84.219	Loxodonta_africana
ENSMFAG00000039903	LSG1	100	97.872	ENSMMUG00000010708	LSG1	100	99.848	Macaca_mulatta
ENSMFAG00000039903	LSG1	100	99.387	ENSMNEG00000031538	LSG1	100	99.387	Macaca_nemestrina
ENSMFAG00000039903	LSG1	100	99.540	ENSMLEG00000041184	LSG1	100	99.544	Mandrillus_leucophaeus
ENSMFAG00000039903	LSG1	99	61.271	ENSMAMG00000000470	lsg1	99	62.256	Mastacembelus_armatus
ENSMFAG00000039903	LSG1	99	62.576	ENSMZEG00005017865	lsg1	99	63.582	Maylandia_zebra
ENSMFAG00000039903	LSG1	88	65.247	ENSMGAG00000007050	LSG1	99	65.932	Meleagris_gallopavo
ENSMFAG00000039903	LSG1	91	79.934	ENSMAUG00000016976	Lsg1	93	81.426	Mesocricetus_auratus
ENSMFAG00000039903	LSG1	100	85.281	ENSMICG00000049087	LSG1	100	86.950	Microcebus_murinus
ENSMFAG00000039903	LSG1	100	79.909	ENSMOCG00000022136	Lsg1	100	80.514	Microtus_ochrogaster
ENSMFAG00000039903	LSG1	83	73.179	ENSMMOG00000008884	lsg1	99	68.864	Mola_mola
ENSMFAG00000039903	LSG1	99	58.459	ENSMODG00000019828	LSG1	99	58.584	Monodelphis_domestica
ENSMFAG00000039903	LSG1	100	80.395	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.942	Mus_caroli
ENSMFAG00000039903	LSG1	100	80.699	ENSMUSG00000022538	Lsg1	100	82.246	Mus_musculus
ENSMFAG00000039903	LSG1	98	81.173	MGP_PahariEiJ_G0016352	Lsg1	100	82.727	Mus_pahari
ENSMFAG00000039903	LSG1	100	80.851	MGP_SPRETEiJ_G0021544	Lsg1	100	82.398	Mus_spretus
ENSMFAG00000039903	LSG1	99	83.587	ENSMPUG00000003734	LSG1	99	84.954	Mustela_putorius_furo
ENSMFAG00000039903	LSG1	99	84.977	ENSMLUG00000012548	LSG1	99	86.191	Myotis_lucifugus
ENSMFAG00000039903	LSG1	100	80.577	ENSNGAG00000021872	Lsg1	100	80.121	Nannospalax_galili
ENSMFAG00000039903	LSG1	100	96.043	ENSNLEG00000008293	LSG1	100	96.657	Nomascus_leucogenys
ENSMFAG00000039903	LSG1	68	69.944	ENSMEUG00000009041	-	82	69.883	Notamacropus_eugenii
ENSMFAG00000039903	LSG1	99	61.898	ENSONIG00000002635	lsg1	99	63.407	Oreochromis_niloticus
ENSMFAG00000039903	LSG1	95	71.497	ENSOANG00000012742	LSG1	99	71.975	Ornithorhynchus_anatinus
ENSMFAG00000039903	LSG1	100	84.977	ENSOCUG00000004817	LSG1	100	86.646	Oryctolagus_cuniculus
ENSMFAG00000039903	LSG1	98	62.422	ENSORLG00000007695	lsg1	99	63.775	Oryzias_latipes
ENSMFAG00000039903	LSG1	98	62.074	ENSORLG00020016286	lsg1	99	63.182	Oryzias_latipes_hni
ENSMFAG00000039903	LSG1	98	62.888	ENSORLG00015012025	lsg1	99	63.623	Oryzias_latipes_hsok
ENSMFAG00000039903	LSG1	98	61.550	ENSOMEG00000022379	lsg1	99	63.070	Oryzias_melastigma
ENSMFAG00000039903	LSG1	100	85.045	ENSOGAG00000003475	LSG1	100	86.707	Otolemur_garnettii
ENSMFAG00000039903	LSG1	99	82.246	ENSOARG00000020403	LSG1	99	83.612	Ovis_aries
ENSMFAG00000039903	LSG1	100	94.521	ENSPPAG00000029271	LSG1	100	95.289	Pan_paniscus
ENSMFAG00000039903	LSG1	99	84.361	ENSPPRG00000010281	LSG1	99	85.564	Panthera_pardus
ENSMFAG00000039903	LSG1	99	84.954	ENSPTIG00000010789	LSG1	99	86.322	Panthera_tigris_altaica
ENSMFAG00000039903	LSG1	100	94.521	ENSPTRG00000015760	LSG1	100	95.289	Pan_troglodytes
ENSMFAG00000039903	LSG1	100	99.163	ENSPANG00000018249	LSG1	100	99.163	Papio_anubis
ENSMFAG00000039903	LSG1	96	63.438	ENSPKIG00000002895	lsg1	100	64.350	Paramormyrops_kingsleyae
ENSMFAG00000039903	LSG1	96	64.386	ENSPSIG00000009821	LSG1	99	65.008	Pelodiscus_sinensis
ENSMFAG00000039903	LSG1	95	64.593	ENSPMGG00000000931	lsg1	99	65.287	Periophthalmus_magnuspinnatus
ENSMFAG00000039903	LSG1	100	80.665	ENSPEMG00000012082	-	100	81.722	Peromyscus_maniculatus_bairdii
ENSMFAG00000039903	LSG1	99	59.618	ENSPMAG00000007451	lsg1	99	60.499	Petromyzon_marinus
ENSMFAG00000039903	LSG1	99	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSMFAG00000039903	LSG1	97	65.231	ENSPFOG00000021882	lsg1	99	66.466	Poecilia_formosa
ENSMFAG00000039903	LSG1	97	64.154	ENSPLAG00000019536	lsg1	99	65.916	Poecilia_latipinna
ENSMFAG00000039903	LSG1	97	64.670	ENSPMEG00000017281	lsg1	99	65.667	Poecilia_mexicana
ENSMFAG00000039903	LSG1	97	54.338	ENSPREG00000006048	lsg1	99	56.278	Poecilia_reticulata
ENSMFAG00000039903	LSG1	92	93.410	ENSPPYG00000014425	LSG1	100	94.563	Pongo_abelii
ENSMFAG00000039903	LSG1	91	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSMFAG00000039903	LSG1	100	87.253	ENSPCOG00000012360	LSG1	100	88.771	Propithecus_coquereli
ENSMFAG00000039903	LSG1	99	62.069	ENSPNYG00000021994	lsg1	99	63.897	Pundamilia_nyererei
ENSMFAG00000039903	LSG1	99	64.458	ENSPNAG00000015533	lsg1	99	65.554	Pygocentrus_nattereri
ENSMFAG00000039903	LSG1	100	81.297	ENSRNOG00000001727	Lsg1	100	82.655	Rattus_norvegicus
ENSMFAG00000039903	LSG1	100	95.441	ENSRBIG00000029053	LSG1	100	97.416	Rhinopithecus_bieti
ENSMFAG00000039903	LSG1	100	95.441	ENSRROG00000037702	LSG1	100	97.416	Rhinopithecus_roxellana
ENSMFAG00000039903	LSG1	65	58.084	YGL099W	LSG1	68	58.683	Saccharomyces_cerevisiae
ENSMFAG00000039903	LSG1	100	92.401	ENSSBOG00000034938	LSG1	100	94.073	Saimiri_boliviensis_boliviensis
ENSMFAG00000039903	LSG1	79	67.429	ENSSHAG00000003487	LSG1	99	66.163	Sarcophilus_harrisii
ENSMFAG00000039903	LSG1	98	63.833	ENSSFOG00015008955	lsg1	99	64.545	Scleropages_formosus
ENSMFAG00000039903	LSG1	98	63.020	ENSSDUG00000004622	lsg1	99	64.243	Seriola_dumerili
ENSMFAG00000039903	LSG1	98	62.693	ENSSLDG00000010869	lsg1	99	63.927	Seriola_lalandi_dorsalis
ENSMFAG00000039903	LSG1	81	84.412	ENSSARG00000012981	LSG1	81	84.412	Sorex_araneus
ENSMFAG00000039903	LSG1	99	66.066	ENSSPUG00000016347	LSG1	99	67.016	Sphenodon_punctatus
ENSMFAG00000039903	LSG1	99	61.667	ENSSPAG00000005508	lsg1	99	63.333	Stegastes_partitus
ENSMFAG00000039903	LSG1	99	83.435	ENSSSCG00000011827	LSG1	99	84.043	Sus_scrofa
ENSMFAG00000039903	LSG1	89	62.689	ENSTGUG00000009068	LSG1	99	64.034	Taeniopygia_guttata
ENSMFAG00000039903	LSG1	97	60.436	ENSTRUG00000017380	lsg1	99	59.788	Takifugu_rubripes
ENSMFAG00000039903	LSG1	97	63.247	ENSTNIG00000015570	lsg1	99	63.746	Tetraodon_nigroviridis
ENSMFAG00000039903	LSG1	99	76.935	ENSTTRG00000000559	LSG1	99	77.390	Tursiops_truncatus
ENSMFAG00000039903	LSG1	99	82.979	ENSUAMG00000012454	LSG1	99	84.347	Ursus_americanus
ENSMFAG00000039903	LSG1	99	82.979	ENSUMAG00000000855	LSG1	99	84.347	Ursus_maritimus
ENSMFAG00000039903	LSG1	95	79.260	ENSVPAG00000012400	LSG1	99	80.960	Vicugna_pacos
ENSMFAG00000039903	LSG1	95	83.040	ENSVVUG00000008956	LSG1	97	84.480	Vulpes_vulpes
ENSMFAG00000039903	LSG1	99	64.361	ENSXETG00000003451	lsg1	99	65.745	Xenopus_tropicalis
ENSMFAG00000039903	LSG1	97	64.055	ENSXCOG00000003239	lsg1	99	65.165	Xiphophorus_couchianus
ENSMFAG00000039903	LSG1	97	64.441	ENSXMAG00000005536	lsg1	99	65.211	Xiphophorus_maculatus