EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000040174 (Gene tree)
Gene ID: 102120756
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 30579 bases
Position: chr13:1088130-1118708
Accession: 102120756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000044307	ResIII	PF04851.15	1.1e-25	1	2
ENSMFAP00000044307	ResIII	PF04851.15	1.1e-25	2	2
ENSMFAP00000044287	ResIII	PF04851.15	1.2e-25	1	2
ENSMFAP00000044287	ResIII	PF04851.15	1.2e-25	2	2
ENSMFAP00000044258	ResIII	PF04851.15	1.2e-25	1	2
ENSMFAP00000044258	ResIII	PF04851.15	1.2e-25	2	2
ENSMFAP00000044340	ResIII	PF04851.15	1.6e-12	1	1
ENSMFAP00000044345	ResIII	PF04851.15	4.7e-12	1	1
ENSMFAP00000044318	ResIII	PF04851.15	1.8e-10	1	1
ENSMFAP00000044307	DEAD	PF00270.29	7.1e-52	1	2
ENSMFAP00000044307	DEAD	PF00270.29	7.1e-52	2	2
ENSMFAP00000044287	DEAD	PF00270.29	7.2e-52	1	2
ENSMFAP00000044287	DEAD	PF00270.29	7.2e-52	2	2
ENSMFAP00000044258	DEAD	PF00270.29	7.3e-52	1	2
ENSMFAP00000044258	DEAD	PF00270.29	7.3e-52	2	2
ENSMFAP00000044340	DEAD	PF00270.29	1.3e-25	1	1
ENSMFAP00000044345	DEAD	PF00270.29	8e-25	1	1
ENSMFAP00000044318	DEAD	PF00270.29	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000018612	SNRNP200-204	2073	-	ENSMFAP00000044318	690 (aa)	-	A0A2K5X4B2
ENSMFAT00000018634	SNRNP200-205	1038	-	ENSMFAP00000044340	345 (aa)	-	A0A2K5X4W3
ENSMFAT00000018552	SNRNP200-201	7192	XM_005574983	ENSMFAP00000044258	2136 (aa)	XP_005575040	A0A2K5X457
ENSMFAT00000018601	SNRNP200-203	6366	-	ENSMFAP00000044307	2121 (aa)	-	A0A2K5X4G2
ENSMFAT00000018639	SNRNP200-206	3306	-	ENSMFAP00000044345	1101 (aa)	-	A0A2K5X4W8
ENSMFAT00000018581	SNRNP200-202	6408	-	ENSMFAP00000044287	2135 (aa)	-	A0A2K5X4E5

Gene Model

Click here to download ENSMFAG00000040174's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000040174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000040174	SNRNP200	75	31.630	ENSMFAG00000003649	HFM1	58	31.630
ENSMFAG00000040174	SNRNP200	97	49.263	ENSMFAG00000002081	ASCC3	74	47.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000040174	SNRNP200	100	99.953	ENSG00000144028	SNRNP200	100	99.953	Homo_sapiens
ENSMFAG00000040174	SNRNP200	99	92.151	ENSAPOG00000010223	snrnp200	99	90.730	Acanthochromis_polyacanthus
ENSMFAG00000040174	SNRNP200	100	99.813	ENSAMEG00000008996	SNRNP200	100	99.813	Ailuropoda_melanoleuca
ENSMFAG00000040174	SNRNP200	99	91.860	ENSACIG00000001764	snrnp200	98	90.203	Amphilophus_citrinellus
ENSMFAG00000040174	SNRNP200	99	92.151	ENSAOCG00000024593	snrnp200	100	89.989	Amphiprion_ocellaris
ENSMFAG00000040174	SNRNP200	99	92.151	ENSAPEG00000012554	snrnp200	100	90.043	Amphiprion_percula
ENSMFAG00000040174	SNRNP200	99	91.570	ENSATEG00000022522	snrnp200	99	90.496	Anabas_testudineus
ENSMFAG00000040174	SNRNP200	99	97.661	ENSAPLG00000004313	SNRNP200	100	97.643	Anas_platyrhynchos
ENSMFAG00000040174	SNRNP200	99	97.545	ENSACAG00000000434	SNRNP200	100	97.545	Anolis_carolinensis
ENSMFAG00000040174	SNRNP200	99	98.271	ENSANAG00000036625	SNRNP200	100	95.802	Aotus_nancymaae
ENSMFAG00000040174	SNRNP200	99	91.570	ENSACLG00000011188	snrnp200	99	90.356	Astatotilapia_calliptera
ENSMFAG00000040174	SNRNP200	99	92.733	ENSAMXG00000005684	snrnp200	99	90.449	Astyanax_mexicanus
ENSMFAG00000040174	SNRNP200	100	99.251	ENSBTAG00000000848	SNRNP200	100	99.251	Bos_taurus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSCJAG00000007514	SNRNP200	100	100.000	Callithrix_jacchus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSCAFG00020019979	SNRNP200	100	100.000	Canis_lupus_dingo
ENSMFAG00000040174	SNRNP200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSTSYG00000010467	SNRNP200	100	100.000	Carlito_syrichta
ENSMFAG00000040174	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSMFAG00000040174	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSCCAG00000033962	SNRNP200	100	100.000	Cebus_capucinus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSCATG00000015790	SNRNP200	100	100.000	Cercocebus_atys
ENSMFAG00000040174	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSMFAG00000040174	SNRNP200	100	99.906	ENSCSAG00000017369	SNRNP200	100	99.906	Chlorocebus_sabaeus
ENSMFAG00000040174	SNRNP200	77	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSMFAG00000040174	SNRNP200	100	97.709	ENSCPBG00000022571	SNRNP200	100	97.709	Chrysemys_picta_bellii
ENSMFAG00000040174	SNRNP200	99	76.553	ENSCING00000005082	-	99	76.693	Ciona_intestinalis
ENSMFAG00000040174	SNRNP200	99	99.708	ENSCANG00000033932	SNRNP200	100	99.900	Colobus_angolensis_palliatus
ENSMFAG00000040174	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSMFAG00000040174	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSMFAG00000040174	SNRNP200	99	91.279	ENSCSEG00000016399	snrnp200	100	89.841	Cynoglossus_semilaevis
ENSMFAG00000040174	SNRNP200	98	91.275	ENSCVAG00000017631	snrnp200	99	85.581	Cyprinodon_variegatus
ENSMFAG00000040174	SNRNP200	100	90.309	ENSDARG00000077536	snrnp200	99	90.309	Danio_rerio
ENSMFAG00000040174	SNRNP200	100	98.784	ENSDNOG00000011227	SNRNP200	100	98.315	Dasypus_novemcinctus
ENSMFAG00000040174	SNRNP200	99	98.551	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSMFAG00000040174	SNRNP200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSMFAG00000040174	SNRNP200	100	98.936	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSMFAG00000040174	SNRNP200	98	77.517	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSMFAG00000040174	SNRNP200	100	98.695	ENSEASG00005001884	SNRNP200	100	98.695	Equus_asinus_asinus
ENSMFAG00000040174	SNRNP200	100	99.813	ENSECAG00000019675	SNRNP200	100	99.813	Equus_caballus
ENSMFAG00000040174	SNRNP200	99	99.123	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMFAG00000040174	SNRNP200	99	91.860	ENSELUG00000018948	snrnp200	99	90.684	Esox_lucius
ENSMFAG00000040174	SNRNP200	100	99.860	ENSFCAG00000010699	SNRNP200	100	99.860	Felis_catus
ENSMFAG00000040174	SNRNP200	99	97.384	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSMFAG00000040174	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSMFAG00000040174	SNRNP200	99	91.860	ENSFHEG00000003786	snrnp200	99	87.734	Fundulus_heteroclitus
ENSMFAG00000040174	SNRNP200	99	91.279	ENSGMOG00000004881	snrnp200	99	89.579	Gadus_morhua
ENSMFAG00000040174	SNRNP200	99	92.151	ENSGAFG00000010807	snrnp200	99	87.968	Gambusia_affinis
ENSMFAG00000040174	SNRNP200	99	91.570	ENSGACG00000011474	snrnp200	99	89.865	Gasterosteus_aculeatus
ENSMFAG00000040174	SNRNP200	99	97.661	ENSGAGG00000016069	SNRNP200	99	97.635	Gopherus_agassizii
ENSMFAG00000040174	SNRNP200	100	100.000	ENSGGOG00000005174	SNRNP200	100	100.000	Gorilla_gorilla
ENSMFAG00000040174	SNRNP200	99	91.570	ENSHBUG00000011322	snrnp200	99	87.774	Haplochromis_burtoni
ENSMFAG00000040174	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSMFAG00000040174	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSMFAG00000040174	SNRNP200	50	81.844	ENSIPUG00000007770	-	89	81.818	Ictalurus_punctatus
ENSMFAG00000040174	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSMFAG00000040174	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSMFAG00000040174	SNRNP200	99	91.570	ENSKMAG00000003665	snrnp200	99	87.494	Kryptolebias_marmoratus
ENSMFAG00000040174	SNRNP200	99	91.279	ENSLBEG00000021585	snrnp200	99	90.215	Labrus_bergylta
ENSMFAG00000040174	SNRNP200	99	96.221	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSMFAG00000040174	SNRNP200	99	93.605	ENSLOCG00000015198	snrnp200	99	92.135	Lepisosteus_oculatus
ENSMFAG00000040174	SNRNP200	100	99.438	ENSLAFG00000015626	SNRNP200	100	99.438	Loxodonta_africana
ENSMFAG00000040174	SNRNP200	100	100.000	ENSMMUG00000023261	SNRNP200	100	100.000	Macaca_mulatta
ENSMFAG00000040174	SNRNP200	100	99.953	ENSMNEG00000032398	SNRNP200	100	99.953	Macaca_nemestrina
ENSMFAG00000040174	SNRNP200	100	100.000	ENSMLEG00000019083	SNRNP200	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000040174	SNRNP200	99	92.442	ENSMAMG00000007851	snrnp200	99	90.126	Mastacembelus_armatus
ENSMFAG00000040174	SNRNP200	99	91.570	ENSMZEG00005010787	snrnp200	99	87.774	Maylandia_zebra
ENSMFAG00000040174	SNRNP200	99	97.661	ENSMGAG00000001831	SNRNP200	100	97.194	Meleagris_gallopavo
ENSMFAG00000040174	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSMFAG00000040174	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSMFAG00000040174	SNRNP200	99	99.415	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSMFAG00000040174	SNRNP200	99	91.570	ENSMMOG00000014167	snrnp200	99	88.858	Mola_mola
ENSMFAG00000040174	SNRNP200	100	98.923	ENSMODG00000008475	SNRNP200	100	98.923	Monodelphis_domestica
ENSMFAG00000040174	SNRNP200	99	91.860	ENSMALG00000001973	snrnp200	99	90.637	Monopterus_albus
ENSMFAG00000040174	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSMFAG00000040174	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSMFAG00000040174	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSMFAG00000040174	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSMFAG00000040174	SNRNP200	100	99.766	ENSMPUG00000008949	SNRNP200	100	99.766	Mustela_putorius_furo
ENSMFAG00000040174	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSMFAG00000040174	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSMFAG00000040174	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSMFAG00000040174	SNRNP200	99	91.570	ENSNBRG00000017960	snrnp200	98	90.261	Neolamprologus_brichardi
ENSMFAG00000040174	SNRNP200	100	98.632	ENSNLEG00000000025	SNRNP200	100	96.377	Nomascus_leucogenys
ENSMFAG00000040174	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSMFAG00000040174	SNRNP200	99	99.123	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSMFAG00000040174	SNRNP200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSMFAG00000040174	SNRNP200	99	91.570	ENSONIG00000010714	snrnp200	99	90.356	Oreochromis_niloticus
ENSMFAG00000040174	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSMFAG00000040174	SNRNP200	99	91.570	ENSORLG00000012286	snrnp200	100	90.262	Oryzias_latipes
ENSMFAG00000040174	SNRNP200	99	91.570	ENSORLG00020004648	snrnp200	100	90.309	Oryzias_latipes_hni
ENSMFAG00000040174	SNRNP200	99	91.570	ENSORLG00015019114	snrnp200	100	90.288	Oryzias_latipes_hsok
ENSMFAG00000040174	SNRNP200	99	91.860	ENSOMEG00000011834	snrnp200	99	90.403	Oryzias_melastigma
ENSMFAG00000040174	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSMFAG00000040174	SNRNP200	100	99.088	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSMFAG00000040174	SNRNP200	100	100.000	ENSPPAG00000041559	SNRNP200	100	100.000	Pan_paniscus
ENSMFAG00000040174	SNRNP200	100	99.860	ENSPPRG00000004435	SNRNP200	100	99.860	Panthera_pardus
ENSMFAG00000040174	SNRNP200	100	99.391	ENSPTIG00000006380	SNRNP200	100	99.391	Panthera_tigris_altaica
ENSMFAG00000040174	SNRNP200	100	100.000	ENSPTRG00000012230	SNRNP200	100	100.000	Pan_troglodytes
ENSMFAG00000040174	SNRNP200	100	100.000	ENSPANG00000006017	SNRNP200	100	100.000	Papio_anubis
ENSMFAG00000040174	SNRNP200	99	92.442	ENSPKIG00000014762	snrnp200	99	91.058	Paramormyrops_kingsleyae
ENSMFAG00000040174	SNRNP200	100	97.269	ENSPSIG00000008580	SNRNP200	100	96.678	Pelodiscus_sinensis
ENSMFAG00000040174	SNRNP200	100	99.130	ENSPEMG00000020700	-	100	99.541	Peromyscus_maniculatus_bairdii
ENSMFAG00000040174	SNRNP200	100	98.923	ENSPCIG00000023050	SNRNP200	100	98.923	Phascolarctos_cinereus
ENSMFAG00000040174	SNRNP200	99	91.884	ENSPFOG00000015110	snrnp200	99	90.314	Poecilia_formosa
ENSMFAG00000040174	SNRNP200	99	92.151	ENSPLAG00000006711	snrnp200	99	90.165	Poecilia_latipinna
ENSMFAG00000040174	SNRNP200	99	92.151	ENSPMEG00000021166	snrnp200	99	90.110	Poecilia_mexicana
ENSMFAG00000040174	SNRNP200	99	92.151	ENSPREG00000008875	snrnp200	99	90.403	Poecilia_reticulata
ENSMFAG00000040174	SNRNP200	100	99.953	ENSPPYG00000012068	SNRNP200	100	99.953	Pongo_abelii
ENSMFAG00000040174	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSMFAG00000040174	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSMFAG00000040174	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSMFAG00000040174	SNRNP200	99	91.860	ENSPNYG00000017476	snrnp200	99	85.948	Pundamilia_nyererei
ENSMFAG00000040174	SNRNP200	99	90.116	ENSPNAG00000010998	snrnp200	99	86.049	Pygocentrus_nattereri
ENSMFAG00000040174	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSMFAG00000040174	SNRNP200	100	100.000	ENSRBIG00000044690	-	100	100.000	Rhinopithecus_bieti
ENSMFAG00000040174	SNRNP200	100	100.000	ENSRROG00000037952	-	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000040174	SNRNP200	100	100.000	ENSSBOG00000035471	SNRNP200	100	100.000	Saimiri_boliviensis_boliviensis
ENSMFAG00000040174	SNRNP200	99	98.830	ENSSHAG00000000758	SNRNP200	100	98.839	Sarcophilus_harrisii
ENSMFAG00000040174	SNRNP200	99	93.023	ENSSFOG00015018826	snrnp200	99	91.479	Scleropages_formosus
ENSMFAG00000040174	SNRNP200	99	91.860	ENSSMAG00000005463	snrnp200	99	90.309	Scophthalmus_maximus
ENSMFAG00000040174	SNRNP200	99	91.860	ENSSDUG00000021410	snrnp200	99	90.590	Seriola_dumerili
ENSMFAG00000040174	SNRNP200	99	91.860	ENSSLDG00000010884	snrnp200	99	90.543	Seriola_lalandi_dorsalis
ENSMFAG00000040174	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSMFAG00000040174	SNRNP200	100	97.472	ENSSPUG00000003726	-	100	97.472	Sphenodon_punctatus
ENSMFAG00000040174	SNRNP200	99	91.860	ENSSPAG00000001842	snrnp200	99	90.637	Stegastes_partitus
ENSMFAG00000040174	SNRNP200	100	99.672	ENSSSCG00000008127	SNRNP200	100	99.672	Sus_scrofa
ENSMFAG00000040174	SNRNP200	99	97.384	ENSTGUG00000014475	-	100	88.037	Taeniopygia_guttata
ENSMFAG00000040174	SNRNP200	99	91.279	ENSTRUG00000001307	snrnp200	99	90.262	Takifugu_rubripes
ENSMFAG00000040174	SNRNP200	98	91.331	ENSTNIG00000004320	snrnp200	98	88.073	Tetraodon_nigroviridis
ENSMFAG00000040174	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSMFAG00000040174	SNRNP200	100	99.485	ENSTTRG00000004983	SNRNP200	100	99.485	Tursiops_truncatus
ENSMFAG00000040174	SNRNP200	95	90.729	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSMFAG00000040174	SNRNP200	100	99.860	ENSUMAG00000012385	SNRNP200	100	99.860	Ursus_maritimus
ENSMFAG00000040174	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMFAG00000040174	SNRNP200	100	100.000	ENSVVUG00000026247	SNRNP200	100	100.000	Vulpes_vulpes
ENSMFAG00000040174	SNRNP200	99	95.906	ENSXETG00000001243	snrnp200	100	94.296	Xenopus_tropicalis
ENSMFAG00000040174	SNRNP200	99	92.151	ENSXMAG00000002058	snrnp200	98	90.418	Xiphophorus_maculatus